RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 GLIS2Q9BZE0 524 aaPredicted RBP9.14□□□□□ -0.95
SCAPER-221ENST00000568549 UPF2Q9HAU5 1272 aaKnown RBP9.14□□□□□ -0.95
SCAPER-221ENST00000568549 OTOFQ9HC10 1997 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 ROBO3Q96MS0 1386 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 KIF3CO14782 793 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 SLC27A2O14975 620 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 SLC3A2P08195 630 aaKnown RBP9.13□□□□□ -0.95
SCAPER-221ENST00000568549 PLCD1P51178 756 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 EVX2Q03828 476 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 CTDSPL2Q05D32 466 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 NECTIN1Q15223 517 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 RNF20Q5VTR2 975 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 PRAMEF18Q5VWM3 479 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 CREB3L3Q68CJ9 461 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 CHADLQ6NUI6 762 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 CRACR2BQ8N4Y2 399 aaPredicted RBP9.13□□□□□ -0.95
SCAPER-221ENST00000568549 HOOK2Q96ED9 719 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 TEPSINQ96N21 525 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 TRIM34Q9BYJ4 488 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 EHD4Q9H223 541 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 PI4KBQ9UBF8 816 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 ANAPC4Q9UJX5 808 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 DOCK1Q14185 1865 aa9.13□□□□□ -0.95
SCAPER-221ENST00000568549 SSC5DA1L4H1 1573 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 PAPPA2Q9BXP8 1791 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 SMIM22K7EJ46 135 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 CYP21A2P08686 494 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 HSPA4P34932 840 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 SUPT20HL1Q3ZLR7 823 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 NBPF12Q5TAG4 269 aaPredicted RBP9.12□□□□□ -0.95
SCAPER-221ENST00000568549 C16orf86Q6ZW13 317 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 TBC1D10CQ8IV04 446 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 FOXP4Q8IVH2 680 aaPredicted RBP9.12□□□□□ -0.95
SCAPER-221ENST00000568549 STK11IPQ8N1F8 1099 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 CDCA5Q96FF9 252 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 DYNLL2Q96FJ2 89 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 SWAP70Q9UH65 585 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 HERC5Q9UII4 1024 aaKnown RBP9.12□□□□□ -0.95
SCAPER-221ENST00000568549 SERPINB13Q9UIV8 391 aa9.12□□□□□ -0.95
SCAPER-221ENST00000568549 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 TRAF5O00463 557 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 TBC1D12O60347 775 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 ZKSCAN1P17029 563 aaPredicted RBP9.11□□□□□ -0.95
SCAPER-221ENST00000568549 NF2P35240 595 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 GABPAQ06546 454 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 PDE4BQ07343 736 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 AKNAD1Q5T1N1 836 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 DCAF15Q66K64 600 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 DLK2Q6UY11 383 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 METTL16Q86W50 562 aaKnown RBP9.11□□□□□ -0.95
SCAPER-221ENST00000568549 SMC1BQ8NDV3 1235 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 STAG1Q8WVM7 1258 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 NBPF3Q9H094 633 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 RNF41Q9H4P4 317 aaPredicted RBP9.11□□□□□ -0.95
SCAPER-221ENST00000568549 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.11□□□□□ -0.95
SCAPER-221ENST00000568549 MKNK2Q9HBH9 465 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 ZNF287Q9HBT7 754 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 TAOK2Q9UL54 1235 aa9.11□□□□□ -0.95
SCAPER-221ENST00000568549 GREB1LQ9C091 1923 aaPredicted RBP9.11□□□□□ -0.95
SCAPER-221ENST00000568549 MYH4Q9Y623 1939 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 E7EWF7 191 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 TOMM70O94826 608 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 SLURP2P0DP57 97 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 PCP11498 1178 aaKnown RBP9.1□□□□□ -0.95
SCAPER-221ENST00000568549 CDK8P49336 464 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 RRP12Q5JTH9 1297 aaKnown RBP9.1□□□□□ -0.95
SCAPER-221ENST00000568549 MFSD6Q6ZSS7 791 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 MIGA2Q7L4E1 593 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 SLC44A5Q8NCS7 719 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 RBM46Q8TBY0 533 aaKnown RBP9.1□□□□□ -0.95
SCAPER-221ENST00000568549 KCNB2Q92953 911 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 ZNF341Q9BYN7 854 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 C22orf23Q9BZE7 217 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 DNAJC18Q9H819 358 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 CNNM2Q9H8M5 875 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 ZNF408Q9H9D4 720 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 PLSCR2Q9NRY7 297 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 TOMM22Q9NS69 142 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCAPER-221ENST00000568549 SNX14Q9Y5W7 946 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 TAF6LQ9Y6J9 622 aa9.1□□□□□ -0.95
SCAPER-221ENST00000568549 NEDD4P46934 1319 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 ORC4O43929 436 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 PPP1R12BO60237 982 aaPredicted RBP9.09□□□□□ -0.95
SCAPER-221ENST00000568549 PRDM1O75626 825 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 ITGBL1O95965 494 aaPredicted RBP9.09□□□□□ -0.95
SCAPER-221ENST00000568549 SHMT1P34896 483 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 RBM25P49756 843 aaKnown RBP9.09□□□□□ -0.95
SCAPER-221ENST00000568549 ANAPC15P60006 121 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 MAP3K10Q02779 954 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 FMR1Q06787 632 aaKnown RBP eCLIP9.09□□□□□ -0.95
SCAPER-221ENST00000568549 TRDNQ13061 729 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 PRKG1Q13976 671 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 TTLL12Q14166 644 aaPredicted RBP9.09□□□□□ -0.95
SCAPER-221ENST00000568549 KRT32Q14532 448 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 TSGA10IPQ3SY00 556 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 TATDN1Q6P1N9 297 aa9.09□□□□□ -0.95
SCAPER-221ENST00000568549 STOX1Q6ZVD7 989 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms