RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 PRKG1Q13976 671 aa17.05■□□□□ 0.32
NEIL1-219ENST00000568519 HABP4Q5JVS0 413 aaKnown RBP17.05■□□□□ 0.32
NEIL1-219ENST00000568519 LCORLQ8N3X6 602 aa17.05■□□□□ 0.32
NEIL1-219ENST00000568519 TGFBRAP1Q8WUH2 860 aa17.05■□□□□ 0.32
NEIL1-219ENST00000568519 STRBPQ96SI9 672 aaKnown RBP17.05■□□□□ 0.32
NEIL1-219ENST00000568519 NAV1Q8NEY1 1877 aa17.05■□□□□ 0.32
NEIL1-219ENST00000568519 BRCA2P51587 3418 aa17.04■□□□□ 0.32
NEIL1-219ENST00000568519 MYH1P12882 1939 aa17.04■□□□□ 0.32
NEIL1-219ENST00000568519 GPAA1O43292 621 aa17.04■□□□□ 0.32
NEIL1-219ENST00000568519 USP5P45974 858 aa17.04■□□□□ 0.32
NEIL1-219ENST00000568519 TCP10Q12799 353 aa17.04■□□□□ 0.32
NEIL1-219ENST00000568519 NBPF12Q5TAG4 269 aaPredicted RBP17.04■□□□□ 0.32
NEIL1-219ENST00000568519 FBXO46Q6PJ61 603 aaPredicted RBP17.04■□□□□ 0.32
NEIL1-219ENST00000568519 ARMC9Q7Z3E5 817 aa17.04■□□□□ 0.32
NEIL1-219ENST00000568519 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
NEIL1-219ENST00000568519 DDRGK1Q96HY6 314 aa17.04■□□□□ 0.32
NEIL1-219ENST00000568519 ARMT1Q9H993 441 aa17.04■□□□□ 0.32
NEIL1-219ENST00000568519 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.04■□□□□ 0.32
NEIL1-219ENST00000568519 HERC5Q9UII4 1024 aaKnown RBP17.04■□□□□ 0.32
NEIL1-219ENST00000568519 RAD50Q92878 1312 aa17.03■□□□□ 0.32
NEIL1-219ENST00000568519 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
NEIL1-219ENST00000568519 PICALMQ13492 652 aa17.03■□□□□ 0.32
NEIL1-219ENST00000568519 TTLL12Q14166 644 aaPredicted RBP17.03■□□□□ 0.32
NEIL1-219ENST00000568519 PKN2Q16513 984 aaKnown RBP17.03■□□□□ 0.32
NEIL1-219ENST00000568519 MCMDC2Q4G0Z9 681 aa17.03■□□□□ 0.32
NEIL1-219ENST00000568519 TTC6Q86TZ1 520 aa17.03■□□□□ 0.32
NEIL1-219ENST00000568519 EHD4Q9H223 541 aa17.03■□□□□ 0.32
NEIL1-219ENST00000568519 DCP1AQ9NPI6 582 aaPredicted RBP17.03■□□□□ 0.32
NEIL1-219ENST00000568519 DIAPH3Q9NSV4 1193 aa17.03■□□□□ 0.32
NEIL1-219ENST00000568519 PI4KBQ9UBF8 816 aa17.03■□□□□ 0.32
NEIL1-219ENST00000568519 KIAA0100Q14667 2235 aaKnown RBP17.02■□□□□ 0.32
NEIL1-219ENST00000568519 CHGBP05060 677 aa17.02■□□□□ 0.32
NEIL1-219ENST00000568519 HLA-DOAP06340 250 aa17.02■□□□□ 0.32
NEIL1-219ENST00000568519 TM4SF4P48230 202 aa17.02■□□□□ 0.32
NEIL1-219ENST00000568519 LDLRAD1Q5T700 205 aa17.02■□□□□ 0.32
NEIL1-219ENST00000568519 SH3BP5LQ7L8J4 393 aa17.02■□□□□ 0.32
NEIL1-219ENST00000568519 FOXP4Q8IVH2 680 aaPredicted RBP17.02■□□□□ 0.32
NEIL1-219ENST00000568519 MAPKAPK5Q8IW41 473 aa17.02■□□□□ 0.32
NEIL1-219ENST00000568519 ZFPM1Q8IX07 1006 aa17.02■□□□□ 0.32
NEIL1-219ENST00000568519 REM2Q8IYK8 340 aaPredicted RBP17.02■□□□□ 0.32
NEIL1-219ENST00000568519 RUFY2Q8WXA3 655 aa17.02■□□□□ 0.32
NEIL1-219ENST00000568519 ZMYM6O95789 1325 aa17.01■□□□□ 0.31
NEIL1-219ENST00000568519 DDTLA6NHG4 134 aaPredicted RBP17.01■□□□□ 0.31
NEIL1-219ENST00000568519 M0R2C6 588 aa17.01■□□□□ 0.31
NEIL1-219ENST00000568519 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
NEIL1-219ENST00000568519 SLFNL1Q499Z3 407 aa17.01■□□□□ 0.31
NEIL1-219ENST00000568519 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
NEIL1-219ENST00000568519 AMOTL1Q8IY63 956 aa17.01■□□□□ 0.31
NEIL1-219ENST00000568519 ZNF341Q9BYN7 854 aa17.01■□□□□ 0.31
NEIL1-219ENST00000568519 ARPP21Q9UBL0 812 aaPredicted RBP17.01■□□□□ 0.31
NEIL1-219ENST00000568519 ZNF112Q9UJU3 913 aa17.01■□□□□ 0.31
NEIL1-219ENST00000568519 SLC4A4Q9Y6R1 1079 aa17.01■□□□□ 0.31
NEIL1-219ENST00000568519 SIPA1L1O43166 1804 aa17■□□□□ 0.31
NEIL1-219ENST00000568519 A0A0D9SFI3 127 aa17■□□□□ 0.31
NEIL1-219ENST00000568519 GSG1L2A8MUP6 293 aa17■□□□□ 0.31
NEIL1-219ENST00000568519 PATL2C9JE40 543 aaKnown RBP17■□□□□ 0.31
NEIL1-219ENST00000568519 FKTNO75072 461 aa17■□□□□ 0.31
NEIL1-219ENST00000568519 USP2O75604 605 aaPredicted RBP17■□□□□ 0.31
NEIL1-219ENST00000568519 SBK1Q52WX2 424 aa17■□□□□ 0.31
NEIL1-219ENST00000568519 ANKRD13AQ8IZ07 590 aa17■□□□□ 0.31
NEIL1-219ENST00000568519 NACAP1Q9BZK3 213 aa17■□□□□ 0.31
NEIL1-219ENST00000568519 CCDC171Q6TFL3 1326 aa16.99■□□□□ 0.31
NEIL1-219ENST00000568519 CHMLP26374 656 aa16.99■□□□□ 0.31
NEIL1-219ENST00000568519 CAP1Q01518 475 aa16.99■□□□□ 0.31
NEIL1-219ENST00000568519 ALX1Q15699 326 aa16.99■□□□□ 0.31
NEIL1-219ENST00000568519 CDAN1Q8IWY9 1227 aa16.99■□□□□ 0.31
NEIL1-219ENST00000568519 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.99■□□□□ 0.31
NEIL1-219ENST00000568519 SDR42E1Q8WUS8 393 aa16.99■□□□□ 0.31
NEIL1-219ENST00000568519 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
NEIL1-219ENST00000568519 SEC62Q99442 399 aaKnown RBP16.99■□□□□ 0.31
NEIL1-219ENST00000568519 GINM1Q9NU53 330 aa16.99■□□□□ 0.31
NEIL1-219ENST00000568519 MCM9Q9NXL9 1143 aa16.99■□□□□ 0.31
NEIL1-219ENST00000568519 OTOFQ9HC10 1997 aa16.98■□□□□ 0.31
NEIL1-219ENST00000568519 LAMB1P07942 1786 aa16.98■□□□□ 0.31
NEIL1-219ENST00000568519 PRKAB2O43741 272 aa16.98■□□□□ 0.31
NEIL1-219ENST00000568519 NOL9Q5SY16 702 aaKnown RBP16.98■□□□□ 0.31
NEIL1-219ENST00000568519 SERPINB13Q9UIV8 391 aa16.98■□□□□ 0.31
NEIL1-219ENST00000568519 PALD1Q9ULE6 856 aa16.98■□□□□ 0.31
NEIL1-219ENST00000568519 ANGEL1Q9UNK9 670 aaKnown RBP16.98■□□□□ 0.31
NEIL1-219ENST00000568519 ROBO3Q96MS0 1386 aa16.98■□□□□ 0.31
NEIL1-219ENST00000568519 BAZ2AQ9UIF9 1905 aaKnown RBP16.98■□□□□ 0.31
NEIL1-219ENST00000568519 CEP290O15078 2479 aa16.97■□□□□ 0.31
NEIL1-219ENST00000568519 MAP3K9P80192 1104 aa16.97■□□□□ 0.31
NEIL1-219ENST00000568519 GABPAQ06546 454 aa16.97■□□□□ 0.31
NEIL1-219ENST00000568519 C12orf60Q5U649 245 aa16.97■□□□□ 0.31
NEIL1-219ENST00000568519 CWC27Q6UX04 472 aaKnown RBP16.97■□□□□ 0.31
NEIL1-219ENST00000568519 SWAP70Q9UH65 585 aa16.97■□□□□ 0.31
NEIL1-219ENST00000568519 TRIM17Q9Y577 477 aa16.97■□□□□ 0.31
NEIL1-219ENST00000568519 SZT2Q5T011 3432 aa16.96■□□□□ 0.31
NEIL1-219ENST00000568519 PHF20L1A8MW92 1017 aa16.96■□□□□ 0.31
NEIL1-219ENST00000568519 CTNND1O60716 968 aaKnown RBP16.96■□□□□ 0.31
NEIL1-219ENST00000568519 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
NEIL1-219ENST00000568519 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
NEIL1-219ENST00000568519 OTOP1Q7RTM1 612 aa16.96■□□□□ 0.31
NEIL1-219ENST00000568519 IFNL3Q8IZI9 196 aa16.96■□□□□ 0.31
NEIL1-219ENST00000568519 DSCC1Q9BVC3 393 aa16.96■□□□□ 0.31
NEIL1-219ENST00000568519 TRIM34Q9BYJ4 488 aa16.96■□□□□ 0.31
NEIL1-219ENST00000568519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.96■□□□□ 0.31
NEIL1-219ENST00000568519 RBBP6Q7Z6E9 1792 aaKnown RBP16.96■□□□□ 0.31
NEIL1-219ENST00000568519 USP17L12C9JPN9 530 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms