RNA–Protein interactions for RNA: ENST00000567982.5

POLR2C-208, Transcript of RNA polymerase II subunit C, human

TSL 2

Gene POLR2C, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2C-208	ENST00000567982	ZNF70	Q9UC06	446 aa	Predicted RBP	13.79	□□□□□ -0.2
POLR2C-208	ENST00000567982	FAM198A	Q9UFP1	575 aa		13.79	□□□□□ -0.2
POLR2C-208	ENST00000567982	HACL1	Q9UJ83	578 aa		13.79	□□□□□ -0.2
POLR2C-208	ENST00000567982	ABT1	Q9ULW3	272 aa	Known RBP	13.79	□□□□□ -0.2
POLR2C-208	ENST00000567982	CLEC11A	Q9Y240	323 aa		13.79	□□□□□ -0.2
POLR2C-208	ENST00000567982	ROBO3	Q96MS0	1386 aa		13.79	□□□□□ -0.2
POLR2C-208	ENST00000567982	CAST	P20810	708 aa	Known RBP	13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	ANP32A	P39687	249 aa	Known RBP	13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	PICALM	Q13492	652 aa		13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	AKNAD1	Q5T1N1	836 aa		13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	FKBP1C	Q5VVH2	108 aa		13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	RUFY3	Q7L099	469 aa		13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	SAMD7	Q7Z3H4	446 aa		13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	IL27	Q8NEV9	243 aa		13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	STAG1	Q8WVM7	1258 aa		13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	UPF3B	Q9BZI7	483 aa	Known RBP	13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982	SAP30BP	Q9UHR5	308 aa	Known RBP	13.78	□□□□□ -0.2
POLR2C-208	ENST00000567982		H7C1D1	291 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	ENTPD3	O75355	529 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	COL2A1	P02458	1487 aa	Predicted RBP	13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	HMGB1	P09429	215 aa	Known RBP	13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	MYH1	P12882	1939 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	CPA1	P15085	419 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	RPS6KB1	P23443	525 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	EPS15	P42566	896 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	PLCD1	P51178	756 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	NEK4	P51957	841 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	BLOC1S2	Q6QNY1	142 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	PNMA8A	Q86V59	439 aa	Predicted RBP	13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	ZFPM1	Q8IX07	1006 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	NKX2-3	Q8TAU0	364 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	SNX21	Q969T3	373 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	TTC14	Q96N46	770 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	INCENP	Q9NQS7	918 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	CYP46A1	Q9Y6A2	500 aa		13.77	□□□□□ -0.21
POLR2C-208	ENST00000567982	PDE4DIP	Q5VU43	2346 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	ATRNL1	Q5VV63	1379 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	NEDD4	P46934	1319 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	CLRN2	A0PK11	232 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	MYO1B	O43795	1136 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	CD2BP2	O95400	341 aa	Known RBP	13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	POLR3D	P05423	398 aa	Predicted RBP	13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	PC	P11498	1178 aa	Known RBP	13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	EXOSC10	Q01780	885 aa	Known RBP	13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	KIF4B	Q2VIQ3	1234 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	RBM26	Q5T8P6	1007 aa	Known RBP	13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	MFSD6	Q6ZSS7	791 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	AMOTL1	Q8IY63	956 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	NCOA7	Q8NI08	942 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	RNF41	Q9H4P4	317 aa	Predicted RBP	13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	TMOD2	Q9NZR1	351 aa		13.76	□□□□□ -0.21
POLR2C-208	ENST00000567982	ORC4	O43929	436 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	SLC3A2	P08195	630 aa	Known RBP	13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	TCP10	Q12799	353 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	SLC4A8	Q2Y0W8	1093 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	DHX32	Q7L7V1	743 aa	Known RBP	13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	SH3BP5L	Q7L8J4	393 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	TTC6	Q86TZ1	520 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	TRPM4	Q8TD43	1214 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	CAPNS2	Q96L46	248 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	BEGAIN	Q9BUH8	593 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	DHX36	Q9H2U1	1008 aa	Known RBP	13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	CNNM2	Q9H8M5	875 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	TRPM7	Q96QT4	1865 aa		13.75	□□□□□ -0.21
POLR2C-208	ENST00000567982	ASTN2	O75129	1339 aa	Predicted RBP	13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	WDR19	Q8NEZ3	1342 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	DDTL	A6NHG4	134 aa	Predicted RBP	13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	TCP10L2	B9ZVM9	353 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	ST18	O60284	1047 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	LMOD1	P29536	600 aa	Predicted RBP	13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	HIRA	P54198	1017 aa	Predicted RBP	13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	ANTXR2	P58335	489 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	GABPA	Q06546	454 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	TRDN	Q13061	729 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	C16orf86	Q6ZW13	317 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	RALYL	Q86SE5	291 aa	Known RBP	13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	FAM83A	Q86UY5	434 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	STK11IP	Q8N1F8	1099 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	FAM151A	Q8WW52	585 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	DYNLL2	Q96FJ2	89 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	KRT23	Q9C075	422 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	EHD4	Q9H223	541 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	PDRG1	Q9NUG6	133 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	PGAP2	Q9UHJ9	254 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	SIPA1L1	O43166	1804 aa		13.74	□□□□□ -0.21
POLR2C-208	ENST00000567982	TNRC18	O15417	2968 aa	Predicted RBP	13.73	□□□□□ -0.21
POLR2C-208	ENST00000567982	CASP8AP2	Q9UKL3	1982 aa		13.73	□□□□□ -0.21
POLR2C-208	ENST00000567982		B4E1Z4	1266 aa		13.73	□□□□□ -0.21
POLR2C-208	ENST00000567982	KDM4A	O75164	1064 aa		13.73	□□□□□ -0.21
POLR2C-208	ENST00000567982	PRDM1	O75626	825 aa		13.73	□□□□□ -0.21
POLR2C-208	ENST00000567982	MCM5	P33992	734 aa		13.73	□□□□□ -0.21
POLR2C-208	ENST00000567982	ECE1	P42892	770 aa		13.73	□□□□□ -0.21
POLR2C-208	ENST00000567982	NT5C2	P49902	561 aa		13.73	□□□□□ -0.21
POLR2C-208	ENST00000567982	PDE4B	Q07343	736 aa		13.73	□□□□□ -0.21
POLR2C-208	ENST00000567982	CYP4F22	Q6NT55	531 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms