RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.31■■■□□ 2.12
CNEP1R1-209ENST00000567712 SMCR8Q8TEV9 937 aaPredicted RBP28.29■■■□□ 2.12
CNEP1R1-209ENST00000567712 OSBPL5Q9H0X9 879 aaPredicted RBP28.29■■■□□ 2.12
CNEP1R1-209ENST00000567712 ALPK3Q96L96 1907 aa28.29■■■□□ 2.12
CNEP1R1-209ENST00000567712 TNPO2O14787 897 aaKnown RBP28.28■■■□□ 2.12
CNEP1R1-209ENST00000567712 INHAP05111 366 aa28.28■■■□□ 2.12
CNEP1R1-209ENST00000567712 SPP2Q13103 211 aa28.28■■■□□ 2.12
CNEP1R1-209ENST00000567712 CLUAP1Q96AJ1 413 aa28.28■■■□□ 2.12
CNEP1R1-209ENST00000567712 RAI14Q9P0K7 980 aa28.28■■■□□ 2.12
CNEP1R1-209ENST00000567712 RBM27Q9P2N5 1060 aaKnown RBP28.28■■■□□ 2.12
CNEP1R1-209ENST00000567712 COL2A1P02458 1487 aaPredicted RBP28.27■■■□□ 2.12
CNEP1R1-209ENST00000567712 SGPL1O95470 568 aa28.27■■■□□ 2.12
CNEP1R1-209ENST00000567712 GNAI2P04899 355 aa28.27■■■□□ 2.12
CNEP1R1-209ENST00000567712 SH3RF3Q8TEJ3 882 aaPredicted RBP28.27■■■□□ 2.12
CNEP1R1-209ENST00000567712 LDHCP07864 332 aa28.26■■■□□ 2.11
CNEP1R1-209ENST00000567712 GSTO1P78417 241 aa28.26■■■□□ 2.11
CNEP1R1-209ENST00000567712 IRF5Q13568 498 aa28.26■■■□□ 2.11
CNEP1R1-209ENST00000567712 GORABQ5T7V8 394 aa28.26■■■□□ 2.11
CNEP1R1-209ENST00000567712 SNRKQ9NRH2 765 aa28.26■■■□□ 2.11
CNEP1R1-209ENST00000567712 PLXNB2O15031 1838 aa28.26■■■□□ 2.11
CNEP1R1-209ENST00000567712 FOCADQ5VW36 1801 aa28.26■■■□□ 2.11
CNEP1R1-209ENST00000567712 FARP2O94887 1054 aaPredicted RBP28.25■■■□□ 2.11
CNEP1R1-209ENST00000567712 CAP2P40123 477 aa28.25■■■□□ 2.11
CNEP1R1-209ENST00000567712 HMGCS2P54868 508 aa28.25■■■□□ 2.11
CNEP1R1-209ENST00000567712 JAG1P78504 1218 aa28.25■■■□□ 2.11
CNEP1R1-209ENST00000567712 ATF7IPQ6VMQ6 1270 aa28.25■■■□□ 2.11
CNEP1R1-209ENST00000567712 ZNF280CQ8ND82 737 aa28.25■■■□□ 2.11
CNEP1R1-209ENST00000567712 PXYLP1Q8TE99 480 aa28.25■■■□□ 2.11
CNEP1R1-209ENST00000567712 FRAT1Q92837 279 aaPredicted RBP28.25■■■□□ 2.11
CNEP1R1-209ENST00000567712 G3BP1Q13283 466 aaKnown RBP eCLIP28.24■■■□□ 2.11
CNEP1R1-209ENST00000567712 ADGRA1Q86SQ6 560 aa28.24■■■□□ 2.11
CNEP1R1-209ENST00000567712 TEX11Q8IYF3 940 aa28.24■■■□□ 2.11
CNEP1R1-209ENST00000567712 PROCA1Q8NCQ7 364 aaPredicted RBP28.24■■■□□ 2.11
CNEP1R1-209ENST00000567712 PRO3102Q9H379 93 aa28.24■■■□□ 2.11
CNEP1R1-209ENST00000567712 TAOK2Q9UL54 1235 aa28.24■■■□□ 2.11
CNEP1R1-209ENST00000567712 MAST2Q6P0Q8 1798 aa28.24■■■□□ 2.11
CNEP1R1-209ENST00000567712 FAM110CQ1W6H9 321 aa28.23■■■□□ 2.11
CNEP1R1-209ENST00000567712 SHROOM1Q2M3G4 852 aaPredicted RBP28.23■■■□□ 2.11
CNEP1R1-209ENST00000567712 DEFB118Q96PH6 123 aa28.23■■■□□ 2.11
CNEP1R1-209ENST00000567712 LRP2BPQ9P2M1 347 aa28.23■■■□□ 2.11
CNEP1R1-209ENST00000567712 MAP4K4O95819 1239 aaPredicted RBP28.22■■■□□ 2.11
CNEP1R1-209ENST00000567712 TMEM57Q8N5G2 664 aa28.22■■■□□ 2.11
CNEP1R1-209ENST00000567712 DNAJC18Q9H819 358 aa28.22■■■□□ 2.11
CNEP1R1-209ENST00000567712 PAK6Q9NQU5 681 aaPredicted RBP28.22■■■□□ 2.11
CNEP1R1-209ENST00000567712 AATFQ9NY61 560 aaKnown RBP eCLIP28.22■■■□□ 2.11
CNEP1R1-209ENST00000567712 CCER2I3L3R5 266 aa28.21■■■□□ 2.11
CNEP1R1-209ENST00000567712 IPO8O15397 1037 aaKnown RBP28.21■■■□□ 2.11
CNEP1R1-209ENST00000567712 PEX10O60683 326 aa28.21■■■□□ 2.11
CNEP1R1-209ENST00000567712 POLA2Q14181 598 aa28.21■■■□□ 2.11
CNEP1R1-209ENST00000567712 DBNDD2Q9BQY9 259 aa28.21■■■□□ 2.11
CNEP1R1-209ENST00000567712 HTATIP2Q9BUP3 242 aa28.21■■■□□ 2.11
CNEP1R1-209ENST00000567712 ASCC2Q9H1I8 757 aaPredicted RBP28.21■■■□□ 2.11
CNEP1R1-209ENST00000567712 USP17L5A8MUK1 530 aa28.2■■■□□ 2.1
CNEP1R1-209ENST00000567712 ZBTB7BO15156 539 aaPredicted RBP28.2■■■□□ 2.1
CNEP1R1-209ENST00000567712 UQCRFS1P1P0C7P4 283 aa28.2■■■□□ 2.1
CNEP1R1-209ENST00000567712 SH3D19Q5HYK7 790 aa28.2■■■□□ 2.1
CNEP1R1-209ENST00000567712 COA7Q96BR5 231 aa28.2■■■□□ 2.1
CNEP1R1-209ENST00000567712 GJD2Q9UKL4 321 aa28.2■■■□□ 2.1
CNEP1R1-209ENST00000567712 PNMA3Q9UL41 463 aa28.2■■■□□ 2.1
CNEP1R1-209ENST00000567712 TRIM32Q13049 653 aa28.19■■■□□ 2.1
CNEP1R1-209ENST00000567712 TNNI3KQ59H18 835 aa28.19■■■□□ 2.1
CNEP1R1-209ENST00000567712 CRISPLD2Q9H0B8 497 aa28.19■■■□□ 2.1
CNEP1R1-209ENST00000567712 FPGT-TNNI3KV9GXZ4 949 aa28.19■■■□□ 2.1
CNEP1R1-209ENST00000567712 TFRCP02786 760 aaKnown RBP28.18■■■□□ 2.1
CNEP1R1-209ENST00000567712 CYP2E1P05181 493 aaPredicted RBP28.18■■■□□ 2.1
CNEP1R1-209ENST00000567712 NAA16Q6N069 864 aaPredicted RBP28.18■■■□□ 2.1
CNEP1R1-209ENST00000567712 MAPKAPK5Q8IW41 473 aa28.18■■■□□ 2.1
CNEP1R1-209ENST00000567712 TGFBRAP1Q8WUH2 860 aa28.18■■■□□ 2.1
CNEP1R1-209ENST00000567712 DIS3LQ8TF46 1054 aaKnown RBP28.17■■■□□ 2.1
CNEP1R1-209ENST00000567712 C1orf115Q9H7X2 142 aa28.17■■■□□ 2.1
CNEP1R1-209ENST00000567712 PI4KBQ9UBF8 816 aa28.17■■■□□ 2.1
CNEP1R1-209ENST00000567712 HERC5Q9UII4 1024 aaKnown RBP28.17■■■□□ 2.1
CNEP1R1-209ENST00000567712 GCLCP48506 637 aaPredicted RBP28.16■■■□□ 2.1
CNEP1R1-209ENST00000567712 PPP4CP60510 307 aa28.16■■■□□ 2.1
CNEP1R1-209ENST00000567712 MTMR2Q13614 643 aa28.16■■■□□ 2.1
CNEP1R1-209ENST00000567712 TTC39AQ5SRH9 613 aa28.16■■■□□ 2.1
CNEP1R1-209ENST00000567712 SSH3Q8TE77 659 aa28.16■■■□□ 2.1
CNEP1R1-209ENST00000567712 TBC1D2Q9BYX2 928 aa28.16■■■□□ 2.1
CNEP1R1-209ENST00000567712 FLT1P17948 1338 aa28.16■■■□□ 2.1
CNEP1R1-209ENST00000567712 PAWRQ96IZ0 340 aaKnown RBP28.15■■■□□ 2.1
CNEP1R1-209ENST00000567712 WDR18Q9BV38 432 aa28.15■■■□□ 2.1
CNEP1R1-209ENST00000567712 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.15■■■□□ 2.1
CNEP1R1-209ENST00000567712 GPR108Q9NPR9 543 aa28.15■■■□□ 2.1
CNEP1R1-209ENST00000567712 PIH1D3Q9NQM4 214 aaKnown RBP28.15■■■□□ 2.1
CNEP1R1-209ENST00000567712 PALD1Q9ULE6 856 aa28.15■■■□□ 2.1
CNEP1R1-209ENST00000567712 LAMA3Q16787 3333 aa28.15■■■□□ 2.1
CNEP1R1-209ENST00000567712 MYH1P12882 1939 aa28.15■■■□□ 2.1
CNEP1R1-209ENST00000567712 ZAP70P43403 619 aa28.14■■■□□ 2.1
CNEP1R1-209ENST00000567712 ATP8B2P98198 1209 aa28.14■■■□□ 2.1
CNEP1R1-209ENST00000567712 METTL16Q86W50 562 aaKnown RBP28.14■■■□□ 2.1
CNEP1R1-209ENST00000567712 P2RX7Q99572 595 aaKnown RBP28.14■■■□□ 2.1
CNEP1R1-209ENST00000567712 TXNRD2Q9NNW7 524 aa28.14■■■□□ 2.1
CNEP1R1-209ENST00000567712 TLR7Q9NYK1 1049 aaKnown RBP28.14■■■□□ 2.1
CNEP1R1-209ENST00000567712 NR2E3Q9Y5X4 410 aa28.14■■■□□ 2.1
CNEP1R1-209ENST00000567712 GDF11O95390 407 aa28.13■■■□□ 2.09
CNEP1R1-209ENST00000567712 BACE1P56817 501 aa28.13■■■□□ 2.09
CNEP1R1-209ENST00000567712 DYNLL1P63167 89 aaKnown RBP28.13■■■□□ 2.09
CNEP1R1-209ENST00000567712 POTEEQ6S8J3 1075 aa28.13■■■□□ 2.09
CNEP1R1-209ENST00000567712 DHX36Q9H2U1 1008 aaKnown RBP28.13■■■□□ 2.09
CNEP1R1-209ENST00000567712 MORF4L1Q9UBU8 362 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms