RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 NT5C2P49902 561 aa27.04■■□□□ 1.92
LINC00543-201ENST00000567234 FOSBP53539 338 aa27.04■■□□□ 1.92
LINC00543-201ENST00000567234 BRAPQ7Z569 592 aa27.04■■□□□ 1.92
LINC00543-201ENST00000567234 UBAC1Q9BSL1 405 aa27.04■■□□□ 1.92
LINC00543-201ENST00000567234 FAM217BQ9NTX9 383 aaPredicted RBP27.04■■□□□ 1.92
LINC00543-201ENST00000567234 AATFQ9NY61 560 aaKnown RBP eCLIP27.04■■□□□ 1.92
LINC00543-201ENST00000567234 FAM13BQ9NYF5 915 aa27.04■■□□□ 1.92
LINC00543-201ENST00000567234 DLEC1Q9Y238 1755 aa27.04■■□□□ 1.92
LINC00543-201ENST00000567234 IL1R1P14778 569 aa27.04■■□□□ 1.92
LINC00543-201ENST00000567234 PPP2R5BQ15173 497 aa27.04■■□□□ 1.92
LINC00543-201ENST00000567234 DCP1AQ9NPI6 582 aaPredicted RBP27.04■■□□□ 1.92
LINC00543-201ENST00000567234 ARPP21Q9UBL0 812 aaPredicted RBP27.04■■□□□ 1.92
LINC00543-201ENST00000567234 ECM29Q5VYK3 1845 aa27.04■■□□□ 1.92
LINC00543-201ENST00000567234 GUCY1B3Q02153 619 aa27.03■■□□□ 1.92
LINC00543-201ENST00000567234 CERS3Q8IU89 383 aa27.03■■□□□ 1.92
LINC00543-201ENST00000567234 CD209Q9NNX6 404 aa27.03■■□□□ 1.92
LINC00543-201ENST00000567234 CCDC196A0A1B0GTZ2 297 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 IARSP41252 1262 aaKnown RBP27.02■■□□□ 1.92
LINC00543-201ENST00000567234 R3HDM1Q15032 1099 aaKnown RBP27.02■■□□□ 1.92
LINC00543-201ENST00000567234 SP8Q8IXZ3 490 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 CCDC94Q9BW85 323 aaPredicted RBP27.02■■□□□ 1.92
LINC00543-201ENST00000567234 USP17L12C9JPN9 530 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 USP17L21D6R901 530 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 ORC4O43929 436 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 PPFIA3O75145 1194 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 LDHCP07864 332 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 IFNAR1P17181 557 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 SEC23AQ15436 765 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 ILDR2Q71H61 639 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 PGBD1Q96JS3 809 aa27.02■■□□□ 1.92
LINC00543-201ENST00000567234 SLC3A2P08195 630 aaKnown RBP27.01■■□□□ 1.91
LINC00543-201ENST00000567234 PPP4CP60510 307 aa27.01■■□□□ 1.91
LINC00543-201ENST00000567234 ALG1Q9BT22 464 aa27.01■■□□□ 1.91
LINC00543-201ENST00000567234 DDX19AQ9NUU7 478 aaKnown RBP27.01■■□□□ 1.91
LINC00543-201ENST00000567234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.01■■□□□ 1.91
LINC00543-201ENST00000567234 ZBTB7AO95365 584 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 RXRAP19793 462 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 UVSSAQ2YD98 709 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 TBC1D16Q8TBP0 767 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 WASF1Q92558 559 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 USP28Q96RU2 1077 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 BAG3O95817 575 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 GTF2F1P35269 517 aaKnown RBP eCLIP27■■□□□ 1.91
LINC00543-201ENST00000567234 RTN1Q16799 776 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 ZKSCAN3Q9BRR0 538 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 RTEL1Q9NZ71 1219 aa27■■□□□ 1.91
LINC00543-201ENST00000567234 FMNL1O95466 1100 aaPredicted RBP26.99■■□□□ 1.91
LINC00543-201ENST00000567234 LIG1P18858 919 aa26.99■■□□□ 1.91
LINC00543-201ENST00000567234 SSRP1Q08945 709 aaKnown RBP26.99■■□□□ 1.91
LINC00543-201ENST00000567234 KIAA2012Q0VF49 1180 aa26.99■■□□□ 1.91
LINC00543-201ENST00000567234 IQCA1Q86XH1 822 aa26.99■■□□□ 1.91
LINC00543-201ENST00000567234 TNKSO95271 1327 aa26.98■■□□□ 1.91
LINC00543-201ENST00000567234 ZNF654Q8IZM8 581 aa26.98■■□□□ 1.91
LINC00543-201ENST00000567234 MYRIPQ8NFW9 859 aa26.98■■□□□ 1.91
LINC00543-201ENST00000567234 SLC16A10Q8TF71 515 aa26.98■■□□□ 1.91
LINC00543-201ENST00000567234 ZSCAN10Q96SZ4 725 aaPredicted RBP26.98■■□□□ 1.91
LINC00543-201ENST00000567234 MYL10Q9BUA6 226 aa26.98■■□□□ 1.91
LINC00543-201ENST00000567234 JAG2Q9Y219 1238 aa26.98■■□□□ 1.91
LINC00543-201ENST00000567234 PPEF1O14829 653 aaPredicted RBP26.97■■□□□ 1.91
LINC00543-201ENST00000567234 RANBP6O60518 1105 aaKnown RBP26.97■■□□□ 1.91
LINC00543-201ENST00000567234 SRGNP10124 158 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 NPR1P16066 1061 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 RBM10P98175 930 aaKnown RBP26.97■■□□□ 1.91
LINC00543-201ENST00000567234 KIF23Q02241 960 aaPredicted RBP26.97■■□□□ 1.91
LINC00543-201ENST00000567234 TPRNQ4KMQ1 711 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 NUP62CLQ9H1M0 184 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 POLLQ9UGP5 575 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 ATP6V0A2Q9Y487 856 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 CYP2D7A0A087X1C5 515 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 PSDA5PKW4 1024 aaPredicted RBP26.97■■□□□ 1.91
LINC00543-201ENST00000567234 OTUD7BQ6GQQ9 843 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 CCDC144CPQ8IYA2 1237 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 STK11IPQ8N1F8 1099 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 TBC1D22AQ8WUA7 517 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 PHKBQ93100 1093 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 NOL10Q9BSC4 688 aaKnown RBP26.97■■□□□ 1.91
LINC00543-201ENST00000567234 FUCA2Q9BTY2 467 aa26.97■■□□□ 1.91
LINC00543-201ENST00000567234 MKRN1Q9UHC7 482 aaKnown RBP26.97■■□□□ 1.91
LINC00543-201ENST00000567234 TRIM22Q8IYM9 498 aa26.96■■□□□ 1.91
LINC00543-201ENST00000567234 FANCBQ8NB91 859 aa26.96■■□□□ 1.91
LINC00543-201ENST00000567234 BICD2Q8TD16 824 aa26.96■■□□□ 1.91
LINC00543-201ENST00000567234 GPR101Q96P66 508 aaPredicted RBP26.96■■□□□ 1.91
LINC00543-201ENST00000567234 POLR3EQ9NVU0 708 aa26.96■■□□□ 1.91
LINC00543-201ENST00000567234 MYH6P13533 1939 aa26.95■■□□□ 1.91
LINC00543-201ENST00000567234 YEATS4O95619 227 aa26.95■■□□□ 1.91
LINC00543-201ENST00000567234 PDE6BP35913 854 aa26.95■■□□□ 1.91
LINC00543-201ENST00000567234 PDE4BQ07343 736 aa26.95■■□□□ 1.91
LINC00543-201ENST00000567234 TRIM29Q14134 588 aa26.95■■□□□ 1.91
LINC00543-201ENST00000567234 MYSM1Q5VVJ2 828 aa26.95■■□□□ 1.91
LINC00543-201ENST00000567234 KRT40Q6A162 431 aa26.95■■□□□ 1.91
LINC00543-201ENST00000567234 ENAHQ8N8S7 591 aaPredicted RBP26.95■■□□□ 1.91
LINC00543-201ENST00000567234 DACT1Q9NYF0 836 aa26.95■■□□□ 1.91
LINC00543-201ENST00000567234 ATF5Q9Y2D1 282 aaPredicted RBP26.95■■□□□ 1.91
LINC00543-201ENST00000567234 MROH7-TTC4A0A0A0MT08 1334 aa26.95■■□□□ 1.9
LINC00543-201ENST00000567234 ALDH1B1P30837 517 aa26.95■■□□□ 1.9
LINC00543-201ENST00000567234 FAM205AQ6ZU69 1335 aa26.94■■□□□ 1.9
LINC00543-201ENST00000567234 SMIM22K7EJ46 135 aa26.94■■□□□ 1.9
LINC00543-201ENST00000567234 CALM1P0DP23 149 aa26.94■■□□□ 1.9
LINC00543-201ENST00000567234 CALM2P0DP24 149 aa26.94■■□□□ 1.9
LINC00543-201ENST00000567234 CALM3P0DP25 149 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms