RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PLA2G12BQ9BX93 195 aa12.32□□□□□ -0.44
CAPN3-216ENST00000567071 LRRFIP2Q9Y608 721 aaKnown RBP12.32□□□□□ -0.44
CAPN3-216ENST00000567071 RLFQ13129 1914 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 PRR33A8MZF0 331 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 FPGSQ05932 587 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 TRIM60Q495X7 471 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 TAF7LQ5H9L4 462 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 TREML2Q5T2D2 321 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 APOBEC3HQ6NTF7 200 aaKnown RBP12.31□□□□□ -0.44
CAPN3-216ENST00000567071 MICALL1Q8N3F8 863 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 APBA2Q99767 749 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 DDX20Q9UHI6 824 aaKnown RBP12.31□□□□□ -0.44
CAPN3-216ENST00000567071 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
CAPN3-216ENST00000567071 DOCK1Q14185 1865 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 PLXNA1Q9UIW2 1896 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 H7C1W4 665 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 IGKV5-2P06315 115 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 CSF1RP07333 972 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 RAG1P15918 1043 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 MAPK4P31152 587 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 GYG1P46976 350 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 KCNQ1P51787 676 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 TFF2Q03403 129 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 HHIPL2Q6UWX4 724 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 UIMC1Q96RL1 719 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 KCNH6Q9H252 994 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 CNNM1Q9NRU3 951 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 SUGT1Q9Y2Z0 365 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 TACC3Q9Y6A5 838 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 DOCK2Q92608 1830 aa12.3□□□□□ -0.44
CAPN3-216ENST00000567071 TRIM43BA6NCK2 446 aa12.29□□□□□ -0.44
CAPN3-216ENST00000567071 ANP32CO43423 234 aa12.29□□□□□ -0.44
CAPN3-216ENST00000567071 CTNND1O60716 968 aaKnown RBP12.29□□□□□ -0.44
CAPN3-216ENST00000567071 TMPOP42166 694 aaKnown RBP12.29□□□□□ -0.44
CAPN3-216ENST00000567071 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-216ENST00000567071 UBE4AQ14139 1066 aa12.29□□□□□ -0.44
CAPN3-216ENST00000567071 GRIK5Q16478 980 aa12.29□□□□□ -0.44
CAPN3-216ENST00000567071 CSPP1Q1MSJ5 1256 aa12.29□□□□□ -0.44
CAPN3-216ENST00000567071 CWF19L2Q2TBE0 894 aaKnown RBP12.29□□□□□ -0.44
CAPN3-216ENST00000567071 KSR2Q6VAB6 950 aa12.29□□□□□ -0.44
CAPN3-216ENST00000567071 TRIM43Q96BQ3 446 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-216ENST00000567071 ASCC2Q9H1I8 757 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-216ENST00000567071 C11orf16Q9NQ32 467 aa12.29□□□□□ -0.44
CAPN3-216ENST00000567071 MSRAQ9UJ68 235 aa12.29□□□□□ -0.44
CAPN3-216ENST00000567071 PHIPQ8WWQ0 1821 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 NEURL1BA8MQ27 555 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 ERC2O15083 957 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 ADGRE1Q14246 886 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 CCL14Q16627 93 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 GJC2Q5T442 439 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-216ENST00000567071 LDHAL6AQ6ZMR3 332 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 SH3RF1Q7Z6J0 888 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 MIER1Q8N108 512 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 GPRC5AQ8NFJ5 357 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 HERVK_113Q902F9 699 aa12.28□□□□□ -0.44
CAPN3-216ENST00000567071 FAM84BQ96KN1 310 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-216ENST00000567071 XIRP2A4UGR9 3374 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 PHF20L1A8MW92 1017 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 CLTBP09497 229 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 GCKRQ14397 625 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 SNX17Q15036 470 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 RAB30Q15771 203 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 CAVIN4Q5BKX8 364 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 ZSCAN29Q8IWY8 852 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-216ENST00000567071 PBX4Q9BYU1 374 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 MYH16Q9H6N6 1097 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 IQSEC3Q9UPP2 1182 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-216ENST00000567071 UTYO14607 1347 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 LOC285556D6RIA3 1793 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 CHD9Q3L8U1 2897 aa12.27□□□□□ -0.45
CAPN3-216ENST00000567071 LRRC37A2A6NM11 1700 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 PI4K2BG5E9Z4 385 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 ST18O60284 1047 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 GLRX3O76003 335 aaKnown RBP12.26□□□□□ -0.45
CAPN3-216ENST00000567071 EPHB4P54760 987 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 CCDC57Q2TAC2 916 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 CCDC30Q5VVM6 783 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 PLEKHH3Q7Z736 793 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 TBC1D2Q9BYX2 928 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 SLC28A3Q9HAS3 691 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 COG5Q9UP83 839 aa12.26□□□□□ -0.45
CAPN3-216ENST00000567071 PBX2P40425 430 aa12.25□□□□□ -0.45
CAPN3-216ENST00000567071 HMGCS2P54868 508 aa12.25□□□□□ -0.45
CAPN3-216ENST00000567071 ATP2B2Q01814 1243 aa12.25□□□□□ -0.45
CAPN3-216ENST00000567071 TLE2Q04725 743 aa12.25□□□□□ -0.45
CAPN3-216ENST00000567071 C1orf53Q5VUE5 145 aa12.25□□□□□ -0.45
CAPN3-216ENST00000567071 GPR142Q7Z601 462 aa12.25□□□□□ -0.45
CAPN3-216ENST00000567071 USP6NLQ92738 828 aa12.25□□□□□ -0.45
CAPN3-216ENST00000567071 EDC3Q96F86 508 aaKnown RBP12.25□□□□□ -0.45
CAPN3-216ENST00000567071 PRKRIP1Q9H875 184 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-216ENST00000567071 KIAA0355O15063 1070 aa12.24□□□□□ -0.45
CAPN3-216ENST00000567071 NFIAQ12857 509 aa12.24□□□□□ -0.45
CAPN3-216ENST00000567071 SPP2Q13103 211 aa12.24□□□□□ -0.45
CAPN3-216ENST00000567071 MAP2K5Q13163 448 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms