RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 COA7Q96BR5 231 aa19.19■□□□□ 0.66
PALB2-205ENST00000567003 PAWRQ96IZ0 340 aaKnown RBP19.19■□□□□ 0.66
PALB2-205ENST00000567003 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.19■□□□□ 0.66
PALB2-205ENST00000567003 STAP2Q9UGK3 403 aa19.19■□□□□ 0.66
PALB2-205ENST00000567003 PDS5AQ29RF7 1337 aaKnown RBP19.19■□□□□ 0.66
PALB2-205ENST00000567003 GPR75-ASB3A0A0A6YYF3 556 aa19.18■□□□□ 0.66
PALB2-205ENST00000567003 HMGCS2P54868 508 aa19.18■□□□□ 0.66
PALB2-205ENST00000567003 TRIM32Q13049 653 aa19.18■□□□□ 0.66
PALB2-205ENST00000567003 SPP2Q13103 211 aa19.18■□□□□ 0.66
PALB2-205ENST00000567003 SPTY2D1Q68D10 685 aaPredicted RBP19.18■□□□□ 0.66
PALB2-205ENST00000567003 LRCH3Q96II8 777 aa19.18■□□□□ 0.66
PALB2-205ENST00000567003 CRISPLD2Q9H0B8 497 aa19.18■□□□□ 0.66
PALB2-205ENST00000567003 FAM110CQ1W6H9 321 aa19.17■□□□□ 0.66
PALB2-205ENST00000567003 NEUROD6Q96NK8 337 aa19.17■□□□□ 0.66
PALB2-205ENST00000567003 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.17■□□□□ 0.66
PALB2-205ENST00000567003 HMG20BQ9P0W2 317 aa19.17■□□□□ 0.66
PALB2-205ENST00000567003 A0A0C4DFX4 3053 aa19.16■□□□□ 0.66
PALB2-205ENST00000567003 PLXNB2O15031 1838 aa19.16■□□□□ 0.66
PALB2-205ENST00000567003 SIPA1L1O43166 1804 aa19.16■□□□□ 0.66
PALB2-205ENST00000567003 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
PALB2-205ENST00000567003 TBC1D12O60347 775 aa19.16■□□□□ 0.66
PALB2-205ENST00000567003 PEX10O60683 326 aa19.16■□□□□ 0.66
PALB2-205ENST00000567003 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
PALB2-205ENST00000567003 NSUN4Q96CB9 384 aaKnown RBP19.16■□□□□ 0.66
PALB2-205ENST00000567003 API5Q9BZZ5 524 aaKnown RBP19.16■□□□□ 0.66
PALB2-205ENST00000567003 PNMA3Q9UL41 463 aa19.16■□□□□ 0.66
PALB2-205ENST00000567003 C7orf61Q8IZ16 206 aa19.15■□□□□ 0.66
PALB2-205ENST00000567003 TRMT2AQ8IZ69 625 aaKnown RBP19.15■□□□□ 0.66
PALB2-205ENST00000567003 PROCA1Q8NCQ7 364 aaPredicted RBP19.15■□□□□ 0.66
PALB2-205ENST00000567003 ZNF280CQ8ND82 737 aa19.15■□□□□ 0.66
PALB2-205ENST00000567003 OSBPL5Q9H0X9 879 aaPredicted RBP19.15■□□□□ 0.66
PALB2-205ENST00000567003 ZMYND8Q9ULU4 1186 aaPredicted RBP19.15■□□□□ 0.66
PALB2-205ENST00000567003 DDX60LQ5H9U9 1706 aaKnown RBP19.14■□□□□ 0.66
PALB2-205ENST00000567003 SHROOM1Q2M3G4 852 aaPredicted RBP19.14■□□□□ 0.65
PALB2-205ENST00000567003 SPATA5Q8NB90 893 aa19.14■□□□□ 0.65
PALB2-205ENST00000567003 ASCC2Q9H1I8 757 aaPredicted RBP19.14■□□□□ 0.65
PALB2-205ENST00000567003 RAI14Q9P0K7 980 aa19.14■□□□□ 0.65
PALB2-205ENST00000567003 AKAP2Q9Y2D5 859 aa19.14■□□□□ 0.65
PALB2-205ENST00000567003 HMGCRP04035 888 aa19.13■□□□□ 0.65
PALB2-205ENST00000567003 CAP2P40123 477 aa19.13■□□□□ 0.65
PALB2-205ENST00000567003 NECAB2Q7Z6G3 386 aa19.13■□□□□ 0.65
PALB2-205ENST00000567003 TEX11Q8IYF3 940 aa19.13■□□□□ 0.65
PALB2-205ENST00000567003 SH3RF3Q8TEJ3 882 aaPredicted RBP19.13■□□□□ 0.65
PALB2-205ENST00000567003 FOXD4L1Q9NU39 408 aa19.13■□□□□ 0.65
PALB2-205ENST00000567003 GJD2Q9UKL4 321 aa19.13■□□□□ 0.65
PALB2-205ENST00000567003 COL2A1P02458 1487 aaPredicted RBP19.13■□□□□ 0.65
PALB2-205ENST00000567003 GCLCP48506 637 aaPredicted RBP19.12■□□□□ 0.65
PALB2-205ENST00000567003 JAG1P78504 1218 aa19.12■□□□□ 0.65
PALB2-205ENST00000567003 GORABQ5T7V8 394 aa19.12■□□□□ 0.65
PALB2-205ENST00000567003 HDAC5Q9UQL6 1122 aa19.12■□□□□ 0.65
PALB2-205ENST00000567003 TNNQ9UQP3 1299 aa19.12■□□□□ 0.65
PALB2-205ENST00000567003 CDK5RAP2Q96SN8 1893 aa19.11■□□□□ 0.65
PALB2-205ENST00000567003 USP17L5A8MUK1 530 aa19.11■□□□□ 0.65
PALB2-205ENST00000567003 MCAMP43121 646 aa19.11■□□□□ 0.65
PALB2-205ENST00000567003 MNX1P50219 401 aaPredicted RBP19.11■□□□□ 0.65
PALB2-205ENST00000567003 GSTO1P78417 241 aa19.11■□□□□ 0.65
PALB2-205ENST00000567003 SLC17A8Q8NDX2 589 aa19.11■□□□□ 0.65
PALB2-205ENST00000567003 TRIB2Q92519 343 aa19.11■□□□□ 0.65
PALB2-205ENST00000567003 A0A1W2PPC1 479 aa19.1■□□□□ 0.65
PALB2-205ENST00000567003 LDHCP07864 332 aa19.1■□□□□ 0.65
PALB2-205ENST00000567003 SYN1P17600 705 aa19.1■□□□□ 0.65
PALB2-205ENST00000567003 CYP2B6P20813 491 aa19.1■□□□□ 0.65
PALB2-205ENST00000567003 ARID4AP29374 1257 aaPredicted RBP19.1■□□□□ 0.65
PALB2-205ENST00000567003 PABPC4Q13310 644 aaKnown RBP eCLIP19.1■□□□□ 0.65
PALB2-205ENST00000567003 MTMR2Q13614 643 aa19.1■□□□□ 0.65
PALB2-205ENST00000567003 SNRKQ9NRH2 765 aa19.1■□□□□ 0.65
PALB2-205ENST00000567003 MAST2Q6P0Q8 1798 aa19.1■□□□□ 0.65
PALB2-205ENST00000567003 MYO5AQ9Y4I1 1855 aaKnown RBP19.09■□□□□ 0.65
PALB2-205ENST00000567003 RPTORQ8N122 1335 aa19.09■□□□□ 0.65
PALB2-205ENST00000567003 GNAI3P08754 354 aa19.09■□□□□ 0.65
PALB2-205ENST00000567003 RARSP54136 660 aaKnown RBP19.09■□□□□ 0.65
PALB2-205ENST00000567003 MTX1Q13505 466 aa19.09■□□□□ 0.65
PALB2-205ENST00000567003 SH3D19Q5HYK7 790 aa19.09■□□□□ 0.65
PALB2-205ENST00000567003 GDF15Q99988 308 aa19.09■□□□□ 0.65
PALB2-205ENST00000567003 DNAJC18Q9H819 358 aa19.09■□□□□ 0.65
PALB2-205ENST00000567003 TXNRD2Q9NNW7 524 aa19.09■□□□□ 0.65
PALB2-205ENST00000567003 HMX1Q9NP08 348 aaPredicted RBP19.09■□□□□ 0.65
PALB2-205ENST00000567003 AATFQ9NY61 560 aaKnown RBP eCLIP19.09■□□□□ 0.65
PALB2-205ENST00000567003 CUL9Q8IWT3 2517 aa19.08■□□□□ 0.65
PALB2-205ENST00000567003 PNMA6EA0A0J9YXQ4 647 aa19.08■□□□□ 0.64
PALB2-205ENST00000567003 DLL1O00548 723 aa19.08■□□□□ 0.64
PALB2-205ENST00000567003 GDF11O95390 407 aa19.08■□□□□ 0.64
PALB2-205ENST00000567003 CT47B1P0C2W7 299 aaPredicted RBP19.08■□□□□ 0.64
PALB2-205ENST00000567003 IRX3P78415 501 aaPredicted RBP19.08■□□□□ 0.64
PALB2-205ENST00000567003 MAPKAPK5Q8IW41 473 aa19.08■□□□□ 0.64
PALB2-205ENST00000567003 P2RX7Q99572 595 aaKnown RBP19.08■□□□□ 0.64
PALB2-205ENST00000567003 AS3MTQ9HBK9 375 aa19.08■□□□□ 0.64
PALB2-205ENST00000567003 LRP2BPQ9P2M1 347 aa19.08■□□□□ 0.64
PALB2-205ENST00000567003 MORF4L1Q9UBU8 362 aa19.08■□□□□ 0.64
PALB2-205ENST00000567003 MAP4K4O95819 1239 aaPredicted RBP19.07■□□□□ 0.64
PALB2-205ENST00000567003 PRKAR2AP13861 404 aaKnown RBP19.07■□□□□ 0.64
PALB2-205ENST00000567003 CAPN2P17655 700 aa19.07■□□□□ 0.64
PALB2-205ENST00000567003 ADGRA1Q86SQ6 560 aa19.07■□□□□ 0.64
PALB2-205ENST00000567003 ANKLE1Q8NAG6 615 aa19.07■□□□□ 0.64
PALB2-205ENST00000567003 TBC1D2Q9BYX2 928 aa19.07■□□□□ 0.64
PALB2-205ENST00000567003 NBPF3Q9H094 633 aa19.07■□□□□ 0.64
PALB2-205ENST00000567003 C11orf49Q9H6J7 331 aa19.07■□□□□ 0.64
PALB2-205ENST00000567003 HERC5Q9UII4 1024 aaKnown RBP19.07■□□□□ 0.64
PALB2-205ENST00000567003 FOCADQ5VW36 1801 aa19.07■□□□□ 0.64
PALB2-205ENST00000567003 MAGEA10P43363 369 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms