RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 TMEM87BQ96K49 555 aa20.83■□□□□ 0.92
HERC2-208ENST00000566635 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.83■□□□□ 0.92
HERC2-208ENST00000566635 RANBP6O60518 1105 aaKnown RBP20.82■□□□□ 0.92
HERC2-208ENST00000566635 PFKFB2O60825 505 aa20.82■□□□□ 0.92
HERC2-208ENST00000566635 SLC3A2P08195 630 aaKnown RBP20.82■□□□□ 0.92
HERC2-208ENST00000566635 CACNB3P54284 484 aa20.82■□□□□ 0.92
HERC2-208ENST00000566635 TMEM67Q5HYA8 995 aa20.82■□□□□ 0.92
HERC2-208ENST00000566635 LY9Q9HBG7 655 aa20.82■□□□□ 0.92
HERC2-208ENST00000566635 IFIT3O14879 490 aaKnown RBP20.81■□□□□ 0.92
HERC2-208ENST00000566635 PCP11498 1178 aaKnown RBP20.81■□□□□ 0.92
HERC2-208ENST00000566635 PDIA3P30101 505 aaKnown RBP20.81■□□□□ 0.92
HERC2-208ENST00000566635 EVCP57679 992 aa20.81■□□□□ 0.92
HERC2-208ENST00000566635 ORC4O43929 436 aa20.81■□□□□ 0.92
HERC2-208ENST00000566635 CCT2P78371 535 aaKnown RBP20.81■□□□□ 0.92
HERC2-208ENST00000566635 CIAPIN1Q6FI81 312 aa20.81■□□□□ 0.92
HERC2-208ENST00000566635 SLC44A5Q8NCS7 719 aa20.81■□□□□ 0.92
HERC2-208ENST00000566635 SYT17Q9BSW7 474 aa20.81■□□□□ 0.92
HERC2-208ENST00000566635 NCOA5Q9HCD5 579 aaKnown RBP20.81■□□□□ 0.92
HERC2-208ENST00000566635 SMC3Q9UQE7 1217 aa20.81■□□□□ 0.92
HERC2-208ENST00000566635 GOLGA8BA8MQT2 603 aa20.8■□□□□ 0.92
HERC2-208ENST00000566635 PDE4BQ07343 736 aa20.8■□□□□ 0.92
HERC2-208ENST00000566635 ZNF274Q96GC6 653 aaPredicted RBP20.8■□□□□ 0.92
HERC2-208ENST00000566635 RAB3GAP1Q15042 981 aa20.8■□□□□ 0.92
HERC2-208ENST00000566635 FAM47AQ5JRC9 791 aa20.8■□□□□ 0.92
HERC2-208ENST00000566635 HPS5Q9UPZ3 1129 aa20.8■□□□□ 0.92
HERC2-208ENST00000566635 GJB2P29033 226 aa20.79■□□□□ 0.92
HERC2-208ENST00000566635 PRMT6Q96LA8 375 aaPredicted RBP20.79■□□□□ 0.92
HERC2-208ENST00000566635 OSBPL5Q9H0X9 879 aaPredicted RBP20.79■□□□□ 0.92
HERC2-208ENST00000566635 TNKSO95271 1327 aa20.78■□□□□ 0.92
HERC2-208ENST00000566635 UBAC1Q9BSL1 405 aa20.78■□□□□ 0.92
HERC2-208ENST00000566635 TDRD3Q9H7E2 651 aaKnown RBP20.78■□□□□ 0.92
HERC2-208ENST00000566635 SIPA1L1O43166 1804 aa20.78■□□□□ 0.92
HERC2-208ENST00000566635 JAK2O60674 1132 aa20.78■□□□□ 0.92
HERC2-208ENST00000566635 SART3Q15020 963 aaKnown RBP20.78■□□□□ 0.92
HERC2-208ENST00000566635 NFXL1Q6ZNB6 911 aa20.78■□□□□ 0.92
HERC2-208ENST00000566635 ZFPM1Q8IX07 1006 aa20.78■□□□□ 0.92
HERC2-208ENST00000566635 AGBL3Q8NEM8 1001 aa20.78■□□□□ 0.92
HERC2-208ENST00000566635 HDAC9Q9UKV0 1011 aa20.78■□□□□ 0.92
HERC2-208ENST00000566635 SHTN1A0MZ66 631 aa20.77■□□□□ 0.92
HERC2-208ENST00000566635 LIFRP42702 1097 aa20.77■□□□□ 0.92
HERC2-208ENST00000566635 WTAPQ15007 396 aa20.77■□□□□ 0.92
HERC2-208ENST00000566635 ARHGAP27Q6ZUM4 889 aa20.77■□□□□ 0.92
HERC2-208ENST00000566635 SGMS1Q86VZ5 419 aa20.77■□□□□ 0.92
HERC2-208ENST00000566635 MYL10Q9BUA6 226 aa20.77■□□□□ 0.92
HERC2-208ENST00000566635 FAM198AQ9UFP1 575 aa20.77■□□□□ 0.92
HERC2-208ENST00000566635 SPDYE2BA6NHP3 402 aa20.77■□□□□ 0.91
HERC2-208ENST00000566635 NMT2O60551 498 aa20.77■□□□□ 0.91
HERC2-208ENST00000566635 SPDYE6P0CI01 402 aa20.77■□□□□ 0.91
HERC2-208ENST00000566635 RXRAP19793 462 aa20.77■□□□□ 0.91
HERC2-208ENST00000566635 TCP10Q12799 353 aa20.77■□□□□ 0.91
HERC2-208ENST00000566635 APOA5Q6Q788 366 aa20.77■□□□□ 0.91
HERC2-208ENST00000566635 C16orf86Q6ZW13 317 aa20.77■□□□□ 0.91
HERC2-208ENST00000566635 ZSCAN10Q96SZ4 725 aaPredicted RBP20.77■□□□□ 0.91
HERC2-208ENST00000566635 ZDHHC9Q9Y397 364 aa20.77■□□□□ 0.91
HERC2-208ENST00000566635 DICER1Q9UPY3 1922 aaKnown RBP20.76■□□□□ 0.91
HERC2-208ENST00000566635 ERICH2A1L162 156 aa20.76■□□□□ 0.91
HERC2-208ENST00000566635 CTDNEP1O95476 244 aa20.76■□□□□ 0.91
HERC2-208ENST00000566635 SEC23AQ15436 765 aa20.76■□□□□ 0.91
HERC2-208ENST00000566635 MICU3Q86XE3 530 aa20.76■□□□□ 0.91
HERC2-208ENST00000566635 OGFOD1Q8N543 542 aa20.76■□□□□ 0.91
HERC2-208ENST00000566635 ENAHQ8N8S7 591 aaPredicted RBP20.76■□□□□ 0.91
HERC2-208ENST00000566635 TNPO1Q92973 898 aaKnown RBP20.76■□□□□ 0.91
HERC2-208ENST00000566635 MTA3Q9BTC8 594 aa20.76■□□□□ 0.91
HERC2-208ENST00000566635 MKNK2Q9HBH9 465 aa20.76■□□□□ 0.91
HERC2-208ENST00000566635 MYH8P13535 1937 aa20.76■□□□□ 0.91
HERC2-208ENST00000566635 TSPY2A6NKD2 308 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 FZD9O00144 591 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 CDK8P49336 464 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 NUCB2P80303 420 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 TNIP1Q15025 636 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 NSUN7Q8NE18 718 aaKnown RBP20.75■□□□□ 0.91
HERC2-208ENST00000566635 IDI2Q9BXS1 227 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 SBF1O95248 1867 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 ZNF541Q9H0D2 1346 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 CCDC69A6NI79 296 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 PPFIA3O75145 1194 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 RASA1P20936 1047 aa20.75■□□□□ 0.91
HERC2-208ENST00000566635 TFAP4Q01664 338 aa20.74■□□□□ 0.91
HERC2-208ENST00000566635 DLGAP5Q15398 846 aa20.74■□□□□ 0.91
HERC2-208ENST00000566635 FOXD4L5Q5VV16 416 aaPredicted RBP20.74■□□□□ 0.91
HERC2-208ENST00000566635 IQCA1Q86XH1 822 aa20.74■□□□□ 0.91
HERC2-208ENST00000566635 CCDC144CPQ8IYA2 1237 aa20.74■□□□□ 0.91
HERC2-208ENST00000566635 FOXD4L4Q8WXT5 416 aaPredicted RBP20.74■□□□□ 0.91
HERC2-208ENST00000566635 CLRN2A0PK11 232 aa20.74■□□□□ 0.91
HERC2-208ENST00000566635 YBX3P16989 372 aaKnown RBP eCLIP20.74■□□□□ 0.91
HERC2-208ENST00000566635 TTC6Q86TZ1 520 aa20.74■□□□□ 0.91
HERC2-208ENST00000566635 DDX11Q96FC9 970 aa20.74■□□□□ 0.91
HERC2-208ENST00000566635 SLC12A7Q9Y666 1083 aa20.74■□□□□ 0.91
HERC2-208ENST00000566635 GJA3Q9Y6H8 435 aa20.74■□□□□ 0.91
HERC2-208ENST00000566635 ZBTB43O43298 467 aa20.73■□□□□ 0.91
HERC2-208ENST00000566635 SLURP2P0DP57 97 aa20.73■□□□□ 0.91
HERC2-208ENST00000566635 METAP2P50579 478 aaKnown RBP eCLIP20.73■□□□□ 0.91
HERC2-208ENST00000566635 EIF6P56537 245 aaKnown RBP20.73■□□□□ 0.91
HERC2-208ENST00000566635 NFKBIBQ15653 356 aa20.73■□□□□ 0.91
HERC2-208ENST00000566635 SMARCC2Q8TAQ2 1214 aa20.73■□□□□ 0.91
HERC2-208ENST00000566635 PTPDC1A2A3K4 754 aa20.72■□□□□ 0.91
HERC2-208ENST00000566635 SYT1P21579 422 aa20.72■□□□□ 0.91
HERC2-208ENST00000566635 GABPAQ06546 454 aa20.72■□□□□ 0.91
HERC2-208ENST00000566635 DDTLA6NHG4 134 aaPredicted RBP20.72■□□□□ 0.91
HERC2-208ENST00000566635 GOLGA8AA7E2F4 631 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms