RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 TNNI3KQ59H18 835 aa14.65□□□□□ -0.06
UBR1-206ENST00000566493 ITPRIPQ8IWB1 547 aa14.65□□□□□ -0.06
UBR1-206ENST00000566493 TEX11Q8IYF3 940 aa14.65□□□□□ -0.06
UBR1-206ENST00000566493 SSH3Q8TE77 659 aa14.65□□□□□ -0.06
UBR1-206ENST00000566493 SLC45A1Q9Y2W3 748 aa14.65□□□□□ -0.06
UBR1-206ENST00000566493 FPGT-TNNI3KV9GXZ4 949 aa14.65□□□□□ -0.06
UBR1-206ENST00000566493 MYPNQ86TC9 1320 aa14.65□□□□□ -0.06
UBR1-206ENST00000566493 KIAA0100Q14667 2235 aaKnown RBP14.64□□□□□ -0.07
UBR1-206ENST00000566493 TRIM75PA6NK02 468 aa14.64□□□□□ -0.07
UBR1-206ENST00000566493 SLURP2P0DP57 97 aa14.64□□□□□ -0.07
UBR1-206ENST00000566493 OSBPP22059 807 aa14.64□□□□□ -0.07
UBR1-206ENST00000566493 NAA16Q6N069 864 aaPredicted RBP14.64□□□□□ -0.07
UBR1-206ENST00000566493 SMCR8Q8TEV9 937 aaPredicted RBP14.64□□□□□ -0.07
UBR1-206ENST00000566493 OSBPL5Q9H0X9 879 aaPredicted RBP14.64□□□□□ -0.07
UBR1-206ENST00000566493 C1orf115Q9H7X2 142 aa14.64□□□□□ -0.07
UBR1-206ENST00000566493 SNRKQ9NRH2 765 aa14.64□□□□□ -0.07
UBR1-206ENST00000566493 BCRP11274 1271 aa14.63□□□□□ -0.07
UBR1-206ENST00000566493 PLCG2P16885 1265 aa14.63□□□□□ -0.07
UBR1-206ENST00000566493 CTGFP29279 349 aa14.63□□□□□ -0.07
UBR1-206ENST00000566493 GRK4P32298 578 aa14.63□□□□□ -0.07
UBR1-206ENST00000566493 MIER1Q8N108 512 aa14.63□□□□□ -0.07
UBR1-206ENST00000566493 DBNDD2Q9BQY9 259 aa14.63□□□□□ -0.07
UBR1-206ENST00000566493 TBC1D2Q9BYX2 928 aa14.63□□□□□ -0.07
UBR1-206ENST00000566493 BIN2Q9UBW5 565 aaPredicted RBP14.63□□□□□ -0.07
UBR1-206ENST00000566493 COL2A1P02458 1487 aaPredicted RBP14.63□□□□□ -0.07
UBR1-206ENST00000566493 PHIPQ8WWQ0 1821 aa14.62□□□□□ -0.07
UBR1-206ENST00000566493 FAM196BA6NMK8 535 aa14.62□□□□□ -0.07
UBR1-206ENST00000566493 MGAMO43451 1857 aa14.62□□□□□ -0.07
UBR1-206ENST00000566493 DIEXFQ68CQ4 756 aaKnown RBP14.62□□□□□ -0.07
UBR1-206ENST00000566493 SH3RF3Q8TEJ3 882 aaPredicted RBP14.62□□□□□ -0.07
UBR1-206ENST00000566493 AATFQ9NY61 560 aaKnown RBP eCLIP14.62□□□□□ -0.07
UBR1-206ENST00000566493 PI4KBQ9UBF8 816 aa14.62□□□□□ -0.07
UBR1-206ENST00000566493 HERC5Q9UII4 1024 aaKnown RBP14.62□□□□□ -0.07
UBR1-206ENST00000566493 PNMA3Q9UL41 463 aa14.62□□□□□ -0.07
UBR1-206ENST00000566493 PTPRFP10586 1907 aa14.62□□□□□ -0.07
UBR1-206ENST00000566493 MAST2Q6P0Q8 1798 aa14.61□□□□□ -0.07
UBR1-206ENST00000566493 ZBTB7BO15156 539 aaPredicted RBP14.61□□□□□ -0.07
UBR1-206ENST00000566493 IGSF3O75054 1194 aa14.61□□□□□ -0.07
UBR1-206ENST00000566493 UBXN2AP68543 259 aa14.61□□□□□ -0.07
UBR1-206ENST00000566493 SPP2Q13103 211 aa14.61□□□□□ -0.07
UBR1-206ENST00000566493 PABPC4Q13310 644 aaKnown RBP eCLIP14.61□□□□□ -0.07
UBR1-206ENST00000566493 CCDC84Q86UT8 332 aaPredicted RBP14.61□□□□□ -0.07
UBR1-206ENST00000566493 ZNF280CQ8ND82 737 aa14.61□□□□□ -0.07
UBR1-206ENST00000566493 ZNF512BQ96KM6 892 aaPredicted RBP14.61□□□□□ -0.07
UBR1-206ENST00000566493 TRIM34Q9BYJ4 488 aa14.61□□□□□ -0.07
UBR1-206ENST00000566493 DHX36Q9H2U1 1008 aaKnown RBP14.61□□□□□ -0.07
UBR1-206ENST00000566493 AS3MTQ9HBK9 375 aa14.61□□□□□ -0.07
UBR1-206ENST00000566493 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.61□□□□□ -0.07
UBR1-206ENST00000566493 AGTPBP1Q9UPW5 1226 aa14.61□□□□□ -0.07
UBR1-206ENST00000566493 NOP58Q9Y2X3 529 aaKnown RBP14.61□□□□□ -0.07
UBR1-206ENST00000566493 ATAD5Q96QE3 1844 aa14.61□□□□□ -0.07
UBR1-206ENST00000566493 USP17L5A8MUK1 530 aa14.6□□□□□ -0.07
UBR1-206ENST00000566493 CYP2E1P05181 493 aaPredicted RBP14.6□□□□□ -0.07
UBR1-206ENST00000566493 CAP2P40123 477 aa14.6□□□□□ -0.07
UBR1-206ENST00000566493 PPP4CP60510 307 aa14.6□□□□□ -0.07
UBR1-206ENST00000566493 PRKCZQ05513 592 aa14.6□□□□□ -0.07
UBR1-206ENST00000566493 MTFR1Q15390 333 aa14.6□□□□□ -0.07
UBR1-206ENST00000566493 PROCA1Q8NCQ7 364 aaPredicted RBP14.6□□□□□ -0.07
UBR1-206ENST00000566493 NKX2-3Q8TAU0 364 aa14.6□□□□□ -0.07
UBR1-206ENST00000566493 TGFBRAP1Q8WUH2 860 aa14.6□□□□□ -0.07
UBR1-206ENST00000566493 MKI67P46013 3256 aaKnown RBP14.59□□□□□ -0.07
UBR1-206ENST00000566493 TNPO2O14787 897 aaKnown RBP14.59□□□□□ -0.07
UBR1-206ENST00000566493 RLBP1P12271 317 aa14.59□□□□□ -0.07
UBR1-206ENST00000566493 ZAP70P43403 619 aa14.59□□□□□ -0.07
UBR1-206ENST00000566493 TREML2Q5T2D2 321 aa14.59□□□□□ -0.07
UBR1-206ENST00000566493 MAPKAPK5Q8IW41 473 aa14.59□□□□□ -0.07
UBR1-206ENST00000566493 CRACR2BQ8N4Y2 399 aaPredicted RBP14.59□□□□□ -0.07
UBR1-206ENST00000566493 SLAIN1Q8ND83 568 aa14.59□□□□□ -0.07
UBR1-206ENST00000566493 CCDC8Q9H0W5 538 aaPredicted RBP14.59□□□□□ -0.07
UBR1-206ENST00000566493 BRCA2P51587 3418 aa14.58□□□□□ -0.08
UBR1-206ENST00000566493 MS4A1P11836 297 aa14.58□□□□□ -0.08
UBR1-206ENST00000566493 CCL5P13501 91 aa14.58□□□□□ -0.08
UBR1-206ENST00000566493 ERC1Q8IUD2 1116 aa14.58□□□□□ -0.08
UBR1-206ENST00000566493 FOXP4Q8IVH2 680 aaPredicted RBP14.58□□□□□ -0.08
UBR1-206ENST00000566493 ANKRD13CQ8N6S4 541 aa14.58□□□□□ -0.08
UBR1-206ENST00000566493 COA7Q96BR5 231 aa14.58□□□□□ -0.08
UBR1-206ENST00000566493 RNF208Q9H0X6 261 aa14.58□□□□□ -0.08
UBR1-206ENST00000566493 DBNLQ9UJU6 430 aaKnown RBP14.58□□□□□ -0.08
UBR1-206ENST00000566493 GABRQQ9UN88 632 aa14.58□□□□□ -0.08
UBR1-206ENST00000566493 MYO5AQ9Y4I1 1855 aaKnown RBP14.57□□□□□ -0.08
UBR1-206ENST00000566493 ADCY3O60266 1144 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 IDH1O75874 414 aaKnown RBP14.57□□□□□ -0.08
UBR1-206ENST00000566493 HLA-DOAP06340 250 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 ASNSP08243 561 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 CYP7A1P22680 504 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 GCLCP48506 637 aaPredicted RBP14.57□□□□□ -0.08
UBR1-206ENST00000566493 FLT3LGP49771 235 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 HMGCS2P54868 508 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 CEP85Q6P2H3 762 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 ADGRA1Q86SQ6 560 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 EAF2Q96CJ1 260 aaPredicted RBP14.57□□□□□ -0.08
UBR1-206ENST00000566493 PIH1D3Q9NQM4 214 aaKnown RBP14.57□□□□□ -0.08
UBR1-206ENST00000566493 PCDH10Q9P2E7 1040 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 TAOK2Q9UL54 1235 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 FLT1P17948 1338 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 ZBED9Q6R2W3 1325 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
UBR1-206ENST00000566493 GJB1P08034 283 aa14.56□□□□□ -0.08
UBR1-206ENST00000566493 GJA8P48165 433 aa14.56□□□□□ -0.08
UBR1-206ENST00000566493 RRP1BQ14684 758 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms