RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 RILPL1Q5EBL4 403 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 SLC27A3Q5K4L6 730 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 IFIT1BQ5T764 474 aaKnown RBP15.45■□□□□ 0.06
LINC00563-201ENST00000566370 DRC7Q8IY82 874 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 FANCBQ8NB91 859 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 ENGASEQ8NFI3 743 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 NUP133Q8WUM0 1156 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 SDR42E1Q8WUS8 393 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 PHKBQ93100 1093 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 NSUN4Q96CB9 384 aaKnown RBP15.45■□□□□ 0.06
LINC00563-201ENST00000566370 TIGD1Q96MW7 591 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 ZSCAN10Q96SZ4 725 aaPredicted RBP15.45■□□□□ 0.06
LINC00563-201ENST00000566370 RNF26Q9BY78 433 aaPredicted RBP15.45■□□□□ 0.06
LINC00563-201ENST00000566370 FOXP1Q9H334 677 aaPredicted RBP15.45■□□□□ 0.06
LINC00563-201ENST00000566370 CLIC4Q9Y696 253 aa15.45■□□□□ 0.06
LINC00563-201ENST00000566370 COL1A1P02452 1464 aaPredicted RBP15.45■□□□□ 0.06
LINC00563-201ENST00000566370 ORC4O43929 436 aa15.44■□□□□ 0.06
LINC00563-201ENST00000566370 RANBP6O60518 1105 aaKnown RBP15.44■□□□□ 0.06
LINC00563-201ENST00000566370 CUTAO60888 179 aa15.44■□□□□ 0.06
LINC00563-201ENST00000566370 BAG3O95817 575 aa15.44■□□□□ 0.06
LINC00563-201ENST00000566370 MECOMQ03112 1051 aa15.44■□□□□ 0.06
LINC00563-201ENST00000566370 DHX8Q14562 1220 aaKnown RBP15.44■□□□□ 0.06
LINC00563-201ENST00000566370 RBM17Q96I25 401 aaKnown RBP15.44■□□□□ 0.06
LINC00563-201ENST00000566370 TRIM5Q9C035 493 aa15.44■□□□□ 0.06
LINC00563-201ENST00000566370 FTOQ9C0B1 505 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00563-201ENST00000566370 DNAJC25Q9H1X3 360 aa15.44■□□□□ 0.06
LINC00563-201ENST00000566370 GOLPH3LQ9H4A5 285 aa15.44■□□□□ 0.06
LINC00563-201ENST00000566370 TAF1P21675 1872 aa15.44■□□□□ 0.06
LINC00563-201ENST00000566370 ONECUT3O60422 494 aaPredicted RBP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 MMP1P03956 469 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 LDHBP07195 334 aaKnown RBP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 TPM2P07951 284 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 TERF1P54274 439 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 SNW1Q13573 536 aaKnown RBP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 SBK1Q52WX2 424 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 FAM196AQ6ZSG2 479 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 LUZP1Q86V48 1076 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 NOSTRINQ8IVI9 506 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 SLF2Q8IX21 1173 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 FMR1NBQ8N0W7 255 aaPredicted RBP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 MYL10Q9BUA6 226 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 ZNF287Q9HBT7 754 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 FAM13BQ9NYF5 915 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 DLEC1Q9Y238 1755 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 KIF28PB7ZC32 967 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 BMP15O95972 392 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 ATP2B4P23634 1241 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 CDC25BP30305 580 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 DYNLL1P63167 89 aaKnown RBP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 C15orf52Q6ZUT6 534 aaKnown RBP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 TMC4Q7Z404 712 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 SEPT12Q8IYM1 358 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 CRACR2BQ8N4Y2 399 aaPredicted RBP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 CTCFLQ8NI51 663 aaPredicted RBP15.43■□□□□ 0.06
LINC00563-201ENST00000566370 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 ZKSCAN3Q9BRR0 538 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 TFCP2L1Q9NZI6 479 aa15.43■□□□□ 0.06
LINC00563-201ENST00000566370 COL4A1P02462 1669 aa15.42■□□□□ 0.06
LINC00563-201ENST00000566370 FGRP09769 529 aa15.42■□□□□ 0.06
LINC00563-201ENST00000566370 KIF5BP33176 963 aa15.42■□□□□ 0.06
LINC00563-201ENST00000566370 SARM1Q6SZW1 724 aa15.42■□□□□ 0.06
LINC00563-201ENST00000566370 ADGRA1Q86SQ6 560 aa15.42■□□□□ 0.06
LINC00563-201ENST00000566370 DIS3L2Q8IYB7 885 aaKnown RBP15.42■□□□□ 0.06
LINC00563-201ENST00000566370 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.42■□□□□ 0.06
LINC00563-201ENST00000566370 FAM217BQ9NTX9 383 aaPredicted RBP15.42■□□□□ 0.06
LINC00563-201ENST00000566370 MYH6P13533 1939 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 A0A1B0GVL5 298 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 SMTNL1A8MU46 457 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 USP17L12C9JPN9 530 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 USP17L21D6R901 530 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 SYKP43405 635 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 USP5P45974 858 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 ZNF75DP51815 510 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 NDUFA8P51970 172 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 RBM6P78332 1123 aaKnown RBP15.41■□□□□ 0.06
LINC00563-201ENST00000566370 NFIXQ14938 502 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 SEC23AQ15436 765 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 CTR9Q6PD62 1173 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 KRI1Q8N9T8 703 aaKnown RBP15.41■□□□□ 0.06
LINC00563-201ENST00000566370 SENP2Q9HC62 589 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 INCENPQ9NQS7 918 aa15.41■□□□□ 0.06
LINC00563-201ENST00000566370 AATFQ9NY61 560 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC00563-201ENST00000566370 TNRC6CQ9HCJ0 1690 aaKnown RBP15.41■□□□□ 0.06
LINC00563-201ENST00000566370 PRPF3O43395 683 aaKnown RBP15.4■□□□□ 0.06
LINC00563-201ENST00000566370 NEMFO60524 1076 aa15.4■□□□□ 0.06
LINC00563-201ENST00000566370 ZNF202O95125 648 aa15.4■□□□□ 0.06
LINC00563-201ENST00000566370 PFKFB1P16118 471 aa15.4■□□□□ 0.06
LINC00563-201ENST00000566370 PLCG2P16885 1265 aa15.4■□□□□ 0.06
LINC00563-201ENST00000566370 DNTTIP2Q5QJE6 756 aaKnown RBP15.4■□□□□ 0.06
LINC00563-201ENST00000566370 STK11IPQ8N1F8 1099 aa15.4■□□□□ 0.06
LINC00563-201ENST00000566370 CERKQ8TCT0 537 aa15.4■□□□□ 0.06
LINC00563-201ENST00000566370 PIBF1Q8WXW3 757 aa15.4■□□□□ 0.06
LINC00563-201ENST00000566370 BPIFA3Q9BQP9 254 aa15.4■□□□□ 0.06
LINC00563-201ENST00000566370 DCP1AQ9NPI6 582 aaPredicted RBP15.4■□□□□ 0.06
LINC00563-201ENST00000566370 KIAA1468Q9P260 1216 aa15.4■□□□□ 0.06
LINC00563-201ENST00000566370 BAZ2AQ9UIF9 1905 aaKnown RBP15.4■□□□□ 0.06
LINC00563-201ENST00000566370 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.39■□□□□ 0.05
LINC00563-201ENST00000566370 TSPY2A6NKD2 308 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms