RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 CENPQQ7L2Z9 268 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-211ENST00000566087 MIGA2Q7L4E1 593 aa12.96□□□□□ -0.33
NSMCE1-211ENST00000566087 ERO1BQ86YB8 467 aa12.96□□□□□ -0.33
NSMCE1-211ENST00000566087 ZSCAN29Q8IWY8 852 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-211ENST00000566087 DPF3Q92784 378 aa12.96□□□□□ -0.33
NSMCE1-211ENST00000566087 IDI2Q9BXS1 227 aa12.96□□□□□ -0.33
NSMCE1-211ENST00000566087 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-211ENST00000566087 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
NSMCE1-211ENST00000566087 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-211ENST00000566087 CYP2E1P05181 493 aaPredicted RBP12.95□□□□□ -0.34
NSMCE1-211ENST00000566087 BTDP43251 543 aa12.95□□□□□ -0.34
NSMCE1-211ENST00000566087 ZAP70P43403 619 aa12.95□□□□□ -0.34
NSMCE1-211ENST00000566087 SNAPC2Q13487 334 aa12.95□□□□□ -0.34
NSMCE1-211ENST00000566087 ZNF341Q9BYN7 854 aa12.95□□□□□ -0.34
NSMCE1-211ENST00000566087 BCL11AQ9H165 835 aa12.95□□□□□ -0.34
NSMCE1-211ENST00000566087 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
NSMCE1-211ENST00000566087 MYH2Q9UKX2 1941 aa12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 IDH1O75874 414 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 PSMC4P43686 418 aa12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 TCP10Q12799 353 aa12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 PPIL2Q13356 520 aa12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 LRRFIP1Q32MZ4 808 aaKnown RBP12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 ZSCAN25Q6NSZ9 544 aa12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 C17orf99Q6UX52 265 aa12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 TRIM47Q96LD4 638 aa12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 RPAP1Q9BWH6 1393 aaPredicted RBP12.94□□□□□ -0.34
NSMCE1-211ENST00000566087 TRIOBPQ9H2D6 2365 aa12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 IGHDP01880 384 aa12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 ATP5JP18859 108 aa12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 OSBPP22059 807 aa12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 INPP5BP32019 993 aa12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 RGS3P49796 1198 aa12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 PPP4CP60510 307 aa12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 PI16Q6UXB8 463 aa12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 DHX36Q9H2U1 1008 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 TLR7Q9NYK1 1049 aaKnown RBP12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 SRRDQ9UH36 339 aa12.93□□□□□ -0.34
NSMCE1-211ENST00000566087 AK9Q5TCS8 1911 aa12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 PDHXO00330 501 aa12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 CEP290O15078 2479 aa12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 GNRH1P01148 92 aa12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 CYP7A1P22680 504 aa12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 TEX11Q8IYF3 940 aa12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 RAET1EQ8TD07 263 aa12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 ZCCHC17Q9NP64 241 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 ECHDC1Q9NTX5 307 aa12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 RANBP2P49792 3224 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-211ENST00000566087 MYPNQ86TC9 1320 aa12.91□□□□□ -0.34
NSMCE1-211ENST00000566087 ERC2O15083 957 aa12.91□□□□□ -0.34
NSMCE1-211ENST00000566087 CCL5P13501 91 aa12.91□□□□□ -0.34
NSMCE1-211ENST00000566087 GRK4P32298 578 aa12.91□□□□□ -0.34
NSMCE1-211ENST00000566087 PRMT2P55345 433 aa12.91□□□□□ -0.34
NSMCE1-211ENST00000566087 PPATQ06203 517 aa12.91□□□□□ -0.34
NSMCE1-211ENST00000566087 TRIM34Q9BYJ4 488 aa12.91□□□□□ -0.34
NSMCE1-211ENST00000566087 ADGRA2Q96PE1 1338 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 GOLIM4O00461 696 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 TBC1D12O60347 775 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 PRKCZQ05513 592 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 NFIAQ12857 509 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 PICALMQ13492 652 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 MOGSQ13724 837 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 ANKRD23Q86SG2 305 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 FOXP4Q8IVH2 680 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 MAGEB6Q8N7X4 407 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 DNAJC2Q99543 621 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 HAUS7Q99871 368 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 RNF208Q9H0X6 261 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 PIH1D3Q9NQM4 214 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 PAG1Q9NWQ8 432 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 AATFQ9NY61 560 aaKnown RBP eCLIP12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 BIN2Q9UBW5 565 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 FAM198AQ9UFP1 575 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 MGAMO43451 1857 aa12.9□□□□□ -0.34
NSMCE1-211ENST00000566087 CYP2C8P10632 490 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 HOXD10P28358 340 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 GJA8P48165 433 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 RHBDL3P58872 404 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 UBE2Q1Q7Z7E8 422 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 DDRGK1Q96HY6 314 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 BOLA2Q9H3K6 86 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 PICK1Q9NRD5 415 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 HERC5Q9UII4 1024 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 GABRQQ9UN88 632 aa12.89□□□□□ -0.35
NSMCE1-211ENST00000566087 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 MAGEB6P1A0A0J9YX57 407 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 HLA-DOAP06340 250 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 GJB1P08034 283 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 USP5P45974 858 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 MAP3K10Q02779 954 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 ANKRD45Q5TZF3 282 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 NKX2-3Q8TAU0 364 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 CRNKL1Q9BZJ0 848 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 UNC93B1Q9H1C4 597 aa12.88□□□□□ -0.35
NSMCE1-211ENST00000566087 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms