RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 SPATA31C1P0DKV0 1188 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 XRCC6P12956 609 aaKnown RBP eCLIP6.14□□□□□ -1.43
CAPN3-214ENST00000565274 PSMC1P62191 440 aaKnown RBP6.14□□□□□ -1.43
CAPN3-214ENST00000565274 SRPK2P78362 688 aaKnown RBP6.14□□□□□ -1.43
CAPN3-214ENST00000565274 NUCB1Q02818 461 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 MTFR1Q15390 333 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 SF3A1Q15459 793 aaKnown RBP6.14□□□□□ -1.43
CAPN3-214ENST00000565274 NFE2L2Q16236 605 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 ELOA3BQ3SY89 546 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 PRRT3Q5FWE3 981 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 TBCELQ5QJ74 424 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 ELOA3Q8NG57 546 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 GCC1Q96CN9 775 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 PSMG3-AS1Q96PY0 264 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 PRAM1Q96QH2 718 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 CDK19Q9BWU1 502 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 IFT57Q9NWB7 429 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 CWC25Q9NXE8 425 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-214ENST00000565274 ZHX1Q9UKY1 873 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-214ENST00000565274 CEP83Q9Y592 693 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 PTCH1Q13635 1447 aa6.14□□□□□ -1.43
CAPN3-214ENST00000565274 EDC4Q6P2E9 1401 aaKnown RBP6.14□□□□□ -1.43
CAPN3-214ENST00000565274 ZBTB7BO15156 539 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-214ENST00000565274 VAMP4O75379 141 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 IL13P35225 146 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 DDIT3P35638 169 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 TNNT2P45379 298 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-214ENST00000565274 RIPK4P57078 832 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 GNAI1P63096 354 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 BMP2KLQ5H9B9 411 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 GJC2Q5T442 439 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-214ENST00000565274 NOP9Q86U38 636 aaKnown RBP6.13□□□□□ -1.43
CAPN3-214ENST00000565274 OGFOD1Q8N543 542 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.13□□□□□ -1.43
CAPN3-214ENST00000565274 ACRBPQ8NEB7 543 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 PIK3R5Q8WYR1 880 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 CALR3Q96L12 384 aaKnown RBP6.13□□□□□ -1.43
CAPN3-214ENST00000565274 RPS6KC1Q96S38 1066 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 PAGR1Q9BTK6 254 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 SEZ6LQ9BYH1 1024 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 GGNBP2Q9H3C7 697 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 SMC4Q9NTJ3 1288 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 NOB1Q9ULX3 412 aaKnown RBP6.13□□□□□ -1.43
CAPN3-214ENST00000565274 ZNF232Q9UNY5 417 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 PCDHGA11Q9Y5H2 935 aa6.13□□□□□ -1.43
CAPN3-214ENST00000565274 CDK12Q9NYV4 1490 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-214ENST00000565274 TLDC2A0PJX2 215 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 SPDYE3A6NKU9 549 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 M0R082 166 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 BACH1O14867 736 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 EFSO43281 561 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 SKIP12755 728 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 PAX7P23759 505 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 TBX4P57082 545 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 CCT2P78371 535 aaKnown RBP6.12□□□□□ -1.43
CAPN3-214ENST00000565274 XPCQ01831 940 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-214ENST00000565274 SFSWAPQ12872 951 aaKnown RBP6.12□□□□□ -1.43
CAPN3-214ENST00000565274 WASHC4Q2M389 1173 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 EML3Q32P44 896 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 NOM1Q5C9Z4 860 aaKnown RBP6.12□□□□□ -1.43
CAPN3-214ENST00000565274 C8orf86Q6ZUL3 223 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 HSCBQ8IWL3 235 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 ZNF417Q8TAU3 575 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 ZDHHC1Q8WTX9 485 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 ZNF512BQ96KM6 892 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-214ENST00000565274 CEP63Q96MT8 703 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 ZNF587Q96SQ5 575 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-214ENST00000565274 MAP7D2Q96T17 732 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 CXorf56Q9H5V9 222 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 TNNQ9UQP3 1299 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 SCINQ9Y6U3 715 aa6.12□□□□□ -1.43
CAPN3-214ENST00000565274 SETD1AO15047 1707 aaKnown RBP6.11□□□□□ -1.43
CAPN3-214ENST00000565274 RIMS2Q9UQ26 1411 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 ABCC4O15439 1325 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 TPM2P07951 284 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 GTF2IP78347 998 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 IFT88Q13099 833 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 BIRC2Q13490 618 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 LAMC2Q13753 1193 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 RSPO4Q2I0M5 234 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-214ENST00000565274 SAMD5Q5TGI4 173 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 LARP1BQ659C4 914 aaKnown RBP6.11□□□□□ -1.43
CAPN3-214ENST00000565274 CLEC17AQ6ZS10 378 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 RAB44Q7Z6P3 723 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-214ENST00000565274 TMEM57Q8N5G2 664 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 TSR2Q969E8 191 aaKnown RBP6.11□□□□□ -1.43
CAPN3-214ENST00000565274 SLC30A3Q99726 388 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 PANK2Q9BZ23 570 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 C22orf23Q9BZE7 217 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 API5Q9BZZ5 524 aaKnown RBP6.11□□□□□ -1.43
CAPN3-214ENST00000565274 LNPKQ9C0E8 428 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 MUC3BQ9H195 1237 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 GRPEL1Q9HAV7 217 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 IFT122Q9HBG6 1241 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 TPSG1Q9NRR2 321 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 ZNF358Q9NW07 568 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 NOD1Q9Y239 953 aa6.11□□□□□ -1.43
CAPN3-214ENST00000565274 TMA7Q9Y2S6 64 aaKnown RBP6.11□□□□□ -1.43
CAPN3-214ENST00000565274 KIF13AQ9H1H9 1805 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms