RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 RNF40O75150 1001 aa18.56■□□□□ 0.56
LINC00554-201ENST00000564841 SYKP43405 635 aa18.56■□□□□ 0.56
LINC00554-201ENST00000564841 FKBP4Q02790 459 aaKnown RBP eCLIP18.56■□□□□ 0.56
LINC00554-201ENST00000564841 MYSM1Q5VVJ2 828 aa18.56■□□□□ 0.56
LINC00554-201ENST00000564841 TADA2BQ86TJ2 420 aa18.56■□□□□ 0.56
LINC00554-201ENST00000564841 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.56■□□□□ 0.56
LINC00554-201ENST00000564841 SALL1Q9NSC2 1324 aa18.56■□□□□ 0.56
LINC00554-201ENST00000564841 RPS6KA5O75582 802 aa18.56■□□□□ 0.56
LINC00554-201ENST00000564841 ZMYND10O75800 440 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 FMR1Q06787 632 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC00554-201ENST00000564841 TBX2Q13207 712 aaPredicted RBP18.55■□□□□ 0.56
LINC00554-201ENST00000564841 LONRF3Q496Y0 759 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 MMS22LQ6ZRQ5 1243 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 CXorf56Q9H5V9 222 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 UBAP1LF5GYI3 381 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 EIF3JO75822 258 aaKnown RBP18.55■□□□□ 0.56
LINC00554-201ENST00000564841 SMIM5Q71RC9 77 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 FCHSD1Q86WN1 690 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 C8orf76Q96K31 380 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 RAB21Q9UL25 225 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 PCDHA5Q9Y5H7 936 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 STX10O60499 249 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 RFX5P48382 616 aaPredicted RBP18.55■□□□□ 0.56
LINC00554-201ENST00000564841 FOXO4P98177 505 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 DNAJC21Q5F1R6 531 aaKnown RBP18.55■□□□□ 0.56
LINC00554-201ENST00000564841 MCTP2Q6DN12 878 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 NCAPH2Q6IBW4 605 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 SYNE3Q6ZMZ3 975 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 KCNG4Q8TDN1 519 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 HNRNPLLQ8WVV9 542 aaKnown RBP18.55■□□□□ 0.56
LINC00554-201ENST00000564841 MKRN1Q9UHC7 482 aaKnown RBP18.55■□□□□ 0.56
LINC00554-201ENST00000564841 CDC23Q9UJX2 597 aa18.55■□□□□ 0.56
LINC00554-201ENST00000564841 GOLGB1Q14789 3259 aaKnown RBP18.54■□□□□ 0.56
LINC00554-201ENST00000564841 TTC19Q6DKK2 380 aaPredicted RBP18.54■□□□□ 0.56
LINC00554-201ENST00000564841 TEX13AQ9BXU3 409 aaPredicted RBP18.54■□□□□ 0.56
LINC00554-201ENST00000564841 SAMSN1Q9NSI8 373 aaKnown RBP18.54■□□□□ 0.56
LINC00554-201ENST00000564841 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
LINC00554-201ENST00000564841 TEX33O43247 280 aa18.54■□□□□ 0.56
LINC00554-201ENST00000564841 MNAT1P51948 309 aa18.54■□□□□ 0.56
LINC00554-201ENST00000564841 FAM98CQ17RN3 349 aaKnown RBP18.54■□□□□ 0.56
LINC00554-201ENST00000564841 SHC4Q6S5L8 630 aa18.54■□□□□ 0.56
LINC00554-201ENST00000564841 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
LINC00554-201ENST00000564841 SLC35F6Q8N357 371 aa18.54■□□□□ 0.56
LINC00554-201ENST00000564841 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
LINC00554-201ENST00000564841 ADAMTS7Q9UKP4 1686 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 H7C1W4 665 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 PPFIA4O75335 1185 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 SYF2O95926 243 aaKnown RBP18.53■□□□□ 0.56
LINC00554-201ENST00000564841 USP5P45974 858 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 CCT5P48643 541 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 MCMDC2Q4G0Z9 681 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 ANO1Q5XXA6 986 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 PI16Q6UXB8 463 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 GSPT2Q8IYD1 628 aaKnown RBP18.53■□□□□ 0.56
LINC00554-201ENST00000564841 ROBO1Q9Y6N7 1651 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 KCNQ2O43526 872 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 CASP7P55210 303 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 DHX8Q14562 1220 aaKnown RBP18.53■□□□□ 0.56
LINC00554-201ENST00000564841 MSANTD4Q8NCY6 345 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 COPRSQ9NQ92 184 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 NFE2L3Q9Y4A8 694 aa18.53■□□□□ 0.56
LINC00554-201ENST00000564841 ERLIN1O75477 346 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 EXOSC10Q01780 885 aaKnown RBP18.52■□□□□ 0.56
LINC00554-201ENST00000564841 SPECC1LQ69YQ0 1117 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 ATL3Q6DD88 541 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 FAM71BQ8TC56 605 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 NGLY1Q96IV0 654 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 TUBE1Q9UJT0 475 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 MRC1P22897 1456 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 JCADQ9P266 1359 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 E7EWF7 191 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 CMA1P23946 247 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 TCIRG1Q13488 830 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 GRAMD1CQ8IYS0 662 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 ACRBPQ8NEB7 543 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 ABCC6O95255 1503 aa18.52■□□□□ 0.56
LINC00554-201ENST00000564841 CCDC175P0C221 793 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 ATP5JP18859 108 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 RXRAP19793 462 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 IBSPP21815 317 aaPredicted RBP18.52■□□□□ 0.55
LINC00554-201ENST00000564841 AKAP17AQ02040 695 aaKnown RBP18.52■□□□□ 0.55
LINC00554-201ENST00000564841 CCDC57Q2TAC2 916 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 KCNV1Q6PIU1 500 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 OLFM4Q6UX06 510 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 EFCAB13Q8IY85 973 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 IGSF22Q8N9C0 903 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 BANK1Q8NDB2 785 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 POLR3EQ9NVU0 708 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 ADGRG1Q9Y653 693 aa18.52■□□□□ 0.55
LINC00554-201ENST00000564841 MED15Q96RN5 788 aa18.51■□□□□ 0.55
LINC00554-201ENST00000564841 DENND2AQ9ULE3 1009 aa18.51■□□□□ 0.55
LINC00554-201ENST00000564841 GOLGA6L9A6NEM1 432 aa18.51■□□□□ 0.55
LINC00554-201ENST00000564841 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
LINC00554-201ENST00000564841 WASHC4Q2M389 1173 aa18.51■□□□□ 0.55
LINC00554-201ENST00000564841 PARP4Q9UKK3 1724 aaKnown RBP18.51■□□□□ 0.55
LINC00554-201ENST00000564841 COBLO75128 1261 aa18.5■□□□□ 0.55
LINC00554-201ENST00000564841 ERLIN2O94905 339 aa18.5■□□□□ 0.55
LINC00554-201ENST00000564841 HNRNPH1P31943 449 aaKnown RBP18.5■□□□□ 0.55
LINC00554-201ENST00000564841 AFAP1L1Q8TED9 768 aa18.5■□□□□ 0.55
LINC00554-201ENST00000564841 POLD4Q9HCU8 107 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms