RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 SLAIN1Q8ND83 568 aa19.61■□□□□ 0.73
CDH11-210ENST00000564770 SMCR8Q8TEV9 937 aaPredicted RBP19.61■□□□□ 0.73
CDH11-210ENST00000564770 RNF208Q9H0X6 261 aa19.61■□□□□ 0.73
CDH11-210ENST00000564770 UNC93B1Q9H1C4 597 aa19.61■□□□□ 0.73
CDH11-210ENST00000564770 RAI14Q9P0K7 980 aa19.61■□□□□ 0.73
CDH11-210ENST00000564770 FLT3LGP49771 235 aa19.6■□□□□ 0.73
CDH11-210ENST00000564770 GORABQ5T7V8 394 aa19.6■□□□□ 0.73
CDH11-210ENST00000564770 TMEM57Q8N5G2 664 aa19.6■□□□□ 0.73
CDH11-210ENST00000564770 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.6■□□□□ 0.73
CDH11-210ENST00000564770 MYH1P12882 1939 aa19.6■□□□□ 0.73
CDH11-210ENST00000564770 TNPO2O14787 897 aaKnown RBP19.59■□□□□ 0.73
CDH11-210ENST00000564770 UBXN2AP68543 259 aa19.59■□□□□ 0.73
CDH11-210ENST00000564770 GSTO1P78417 241 aa19.59■□□□□ 0.73
CDH11-210ENST00000564770 TEX11Q8IYF3 940 aa19.59■□□□□ 0.73
CDH11-210ENST00000564770 ANKRD13CQ8N6S4 541 aa19.59■□□□□ 0.73
CDH11-210ENST00000564770 SH3RF3Q8TEJ3 882 aaPredicted RBP19.59■□□□□ 0.73
CDH11-210ENST00000564770 BIN2Q9UBW5 565 aaPredicted RBP19.59■□□□□ 0.73
CDH11-210ENST00000564770 DDX60LQ5H9U9 1706 aaKnown RBP19.59■□□□□ 0.73
CDH11-210ENST00000564770 IPO8O15397 1037 aaKnown RBP19.58■□□□□ 0.72
CDH11-210ENST00000564770 ADCY3O60266 1144 aa19.58■□□□□ 0.72
CDH11-210ENST00000564770 INHAP05111 366 aa19.58■□□□□ 0.72
CDH11-210ENST00000564770 LDHCP07864 332 aa19.58■□□□□ 0.72
CDH11-210ENST00000564770 SPP2Q13103 211 aa19.58■□□□□ 0.72
CDH11-210ENST00000564770 G3BP1Q13283 466 aaKnown RBP eCLIP19.58■□□□□ 0.72
CDH11-210ENST00000564770 ADGRA1Q86SQ6 560 aa19.58■□□□□ 0.72
CDH11-210ENST00000564770 PROCA1Q8NCQ7 364 aaPredicted RBP19.58■□□□□ 0.72
CDH11-210ENST00000564770 NKX2-3Q8TAU0 364 aa19.58■□□□□ 0.72
CDH11-210ENST00000564770 U2AF1L4Q8WU68 220 aaKnown RBP19.58■□□□□ 0.72
CDH11-210ENST00000564770 DBNDD2Q9BQY9 259 aa19.58■□□□□ 0.72
CDH11-210ENST00000564770 SNRKQ9NRH2 765 aa19.58■□□□□ 0.72
CDH11-210ENST00000564770 MAP4K4O95819 1239 aaPredicted RBP19.57■□□□□ 0.72
CDH11-210ENST00000564770 UQCRFS1P1P0C7P4 283 aa19.57■□□□□ 0.72
CDH11-210ENST00000564770 HMGCS2P54868 508 aa19.57■□□□□ 0.72
CDH11-210ENST00000564770 POLA2Q14181 598 aa19.57■□□□□ 0.72
CDH11-210ENST00000564770 FAM110CQ1W6H9 321 aa19.57■□□□□ 0.72
CDH11-210ENST00000564770 TNNI3KQ59H18 835 aa19.57■□□□□ 0.72
CDH11-210ENST00000564770 ZNF280CQ8ND82 737 aa19.57■□□□□ 0.72
CDH11-210ENST00000564770 C1orf115Q9H7X2 142 aa19.57■□□□□ 0.72
CDH11-210ENST00000564770 DNAJC18Q9H819 358 aa19.57■□□□□ 0.72
CDH11-210ENST00000564770 AATFQ9NY61 560 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDH11-210ENST00000564770 FPGT-TNNI3KV9GXZ4 949 aa19.57■□□□□ 0.72
CDH11-210ENST00000564770 CAP2P40123 477 aa19.56■□□□□ 0.72
CDH11-210ENST00000564770 IRF5Q13568 498 aa19.56■□□□□ 0.72
CDH11-210ENST00000564770 SHROOM1Q2M3G4 852 aaPredicted RBP19.56■□□□□ 0.72
CDH11-210ENST00000564770 CHRDL2Q6WN34 429 aa19.56■□□□□ 0.72
CDH11-210ENST00000564770 LRP2BPQ9P2M1 347 aa19.56■□□□□ 0.72
CDH11-210ENST00000564770 FLT1P17948 1338 aa19.55■□□□□ 0.72
CDH11-210ENST00000564770 FARP2O94887 1054 aaPredicted RBP19.55■□□□□ 0.72
CDH11-210ENST00000564770 CYP2E1P05181 493 aaPredicted RBP19.55■□□□□ 0.72
CDH11-210ENST00000564770 JAG1P78504 1218 aa19.55■□□□□ 0.72
CDH11-210ENST00000564770 SSH3Q8TE77 659 aa19.55■□□□□ 0.72
CDH11-210ENST00000564770 PXYLP1Q8TE99 480 aa19.55■□□□□ 0.72
CDH11-210ENST00000564770 GPR108Q9NPR9 543 aa19.55■□□□□ 0.72
CDH11-210ENST00000564770 HERC5Q9UII4 1024 aaKnown RBP19.55■□□□□ 0.72
CDH11-210ENST00000564770 PNMA3Q9UL41 463 aa19.55■□□□□ 0.72
CDH11-210ENST00000564770 NAV1Q8NEY1 1877 aa19.54■□□□□ 0.72
CDH11-210ENST00000564770 TTC39AQ5SRH9 613 aa19.54■□□□□ 0.72
CDH11-210ENST00000564770 NAA16Q6N069 864 aaPredicted RBP19.54■□□□□ 0.72
CDH11-210ENST00000564770 DPF3Q92784 378 aa19.54■□□□□ 0.72
CDH11-210ENST00000564770 PAK6Q9NQU5 681 aaPredicted RBP19.54■□□□□ 0.72
CDH11-210ENST00000564770 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
CDH11-210ENST00000564770 TAOK2Q9UL54 1235 aa19.54■□□□□ 0.72
CDH11-210ENST00000564770 DNAH12Q6ZR08 3092 aa19.54■□□□□ 0.72
CDH11-210ENST00000564770 COL6A3P12111 3177 aa19.53■□□□□ 0.72
CDH11-210ENST00000564770 USP17L5A8MUK1 530 aa19.53■□□□□ 0.72
CDH11-210ENST00000564770 SGPL1O95470 568 aa19.53■□□□□ 0.72
CDH11-210ENST00000564770 SH3D19Q5HYK7 790 aa19.53■□□□□ 0.72
CDH11-210ENST00000564770 ZKSCAN2Q63HK3 967 aa19.53■□□□□ 0.72
CDH11-210ENST00000564770 MAPKAPK5Q8IW41 473 aa19.53■□□□□ 0.72
CDH11-210ENST00000564770 DEFB118Q96PH6 123 aa19.53■□□□□ 0.72
CDH11-210ENST00000564770 TBC1D2Q9BYX2 928 aa19.53■□□□□ 0.72
CDH11-210ENST00000564770 ASCC2Q9H1I8 757 aaPredicted RBP19.53■□□□□ 0.72
CDH11-210ENST00000564770 PIH1D3Q9NQM4 214 aaKnown RBP19.53■□□□□ 0.72
CDH11-210ENST00000564770 RBM27Q9P2N5 1060 aaKnown RBP19.53■□□□□ 0.72
CDH11-210ENST00000564770 DBNLQ9UJU6 430 aaKnown RBP19.53■□□□□ 0.72
CDH11-210ENST00000564770 FRMPD3Q5JV73 1810 aa19.53■□□□□ 0.72
CDH11-210ENST00000564770 RLBP1P12271 317 aa19.52■□□□□ 0.72
CDH11-210ENST00000564770 PPP4CP60510 307 aa19.52■□□□□ 0.72
CDH11-210ENST00000564770 MTMR2Q13614 643 aa19.52■□□□□ 0.72
CDH11-210ENST00000564770 TGFBRAP1Q8WUH2 860 aa19.52■□□□□ 0.72
CDH11-210ENST00000564770 COA7Q96BR5 231 aa19.52■□□□□ 0.72
CDH11-210ENST00000564770 NOL10Q9BSC4 688 aaKnown RBP19.52■□□□□ 0.72
CDH11-210ENST00000564770 PI4KBQ9UBF8 816 aa19.52■□□□□ 0.72
CDH11-210ENST00000564770 PEX10O60683 326 aa19.51■□□□□ 0.71
CDH11-210ENST00000564770 ZAP70P43403 619 aa19.51■□□□□ 0.71
CDH11-210ENST00000564770 GCLCP48506 637 aaPredicted RBP19.51■□□□□ 0.71
CDH11-210ENST00000564770 OS9Q13438 667 aaPredicted RBP19.51■□□□□ 0.71
CDH11-210ENST00000564770 HTATIP2Q9BUP3 242 aa19.51■□□□□ 0.71
CDH11-210ENST00000564770 PRO3102Q9H379 93 aa19.51■□□□□ 0.71
CDH11-210ENST00000564770 SURF6O75683 361 aaKnown RBP19.5■□□□□ 0.71
CDH11-210ENST00000564770 GDF11O95390 407 aa19.5■□□□□ 0.71
CDH11-210ENST00000564770 ATP8B2P98198 1209 aa19.5■□□□□ 0.71
CDH11-210ENST00000564770 CCDC158Q5M9N0 1113 aa19.5■□□□□ 0.71
CDH11-210ENST00000564770 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
CDH11-210ENST00000564770 WDR18Q9BV38 432 aa19.5■□□□□ 0.71
CDH11-210ENST00000564770 CRISPLD2Q9H0B8 497 aa19.5■□□□□ 0.71
CDH11-210ENST00000564770 DHX36Q9H2U1 1008 aaKnown RBP19.5■□□□□ 0.71
CDH11-210ENST00000564770 AS3MTQ9HBK9 375 aa19.5■□□□□ 0.71
CDH11-210ENST00000564770 BAG3O95817 575 aa19.49■□□□□ 0.71
CDH11-210ENST00000564770 ASNSP08243 561 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms