RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 DOCK2Q92608 1830 aa22.66■■□□□ 1.22
CLN6-204ENST00000564752 CYP2E1P05181 493 aaPredicted RBP22.66■■□□□ 1.22
CLN6-204ENST00000564752 FCGRTP55899 365 aa22.66■■□□□ 1.22
CLN6-204ENST00000564752 NAA16Q6N069 864 aaPredicted RBP22.66■■□□□ 1.22
CLN6-204ENST00000564752 RAET1EQ8TD07 263 aa22.66■■□□□ 1.22
CLN6-204ENST00000564752 MYPNQ86TC9 1320 aa22.65■■□□□ 1.22
CLN6-204ENST00000564752 BAG3O95817 575 aa22.65■■□□□ 1.22
CLN6-204ENST00000564752 GRK4P32298 578 aa22.65■■□□□ 1.22
CLN6-204ENST00000564752 PPP4CP60510 307 aa22.65■■□□□ 1.22
CLN6-204ENST00000564752 NOL10Q9BSC4 688 aaKnown RBP22.65■■□□□ 1.22
CLN6-204ENST00000564752 AGTPBP1Q9UPW5 1226 aa22.65■■□□□ 1.22
CLN6-204ENST00000564752 IGSF3O75054 1194 aa22.64■■□□□ 1.21
CLN6-204ENST00000564752 CAP2P40123 477 aa22.64■■□□□ 1.21
CLN6-204ENST00000564752 RRP1BQ14684 758 aaKnown RBP22.64■■□□□ 1.21
CLN6-204ENST00000564752 MTFR1Q15390 333 aa22.64■■□□□ 1.21
CLN6-204ENST00000564752 HABP4Q5JVS0 413 aaKnown RBP22.64■■□□□ 1.21
CLN6-204ENST00000564752 AATFQ9NY61 560 aaKnown RBP eCLIP22.64■■□□□ 1.21
CLN6-204ENST00000564752 HERC5Q9UII4 1024 aaKnown RBP22.64■■□□□ 1.21
CLN6-204ENST00000564752 PLCG2P16885 1265 aa22.63■■□□□ 1.21
CLN6-204ENST00000564752 PRKCZQ05513 592 aa22.63■■□□□ 1.21
CLN6-204ENST00000564752 SPP2Q13103 211 aa22.63■■□□□ 1.21
CLN6-204ENST00000564752 CEP85Q6P2H3 762 aa22.63■■□□□ 1.21
CLN6-204ENST00000564752 ADGRA1Q86SQ6 560 aa22.63■■□□□ 1.21
CLN6-204ENST00000564752 TBC1D2Q9BYX2 928 aa22.63■■□□□ 1.21
CLN6-204ENST00000564752 DHX36Q9H2U1 1008 aaKnown RBP22.63■■□□□ 1.21
CLN6-204ENST00000564752 PI4KBQ9UBF8 816 aa22.63■■□□□ 1.21
CLN6-204ENST00000564752 DBNLQ9UJU6 430 aaKnown RBP22.63■■□□□ 1.21
CLN6-204ENST00000564752 ZAP70P43403 619 aa22.62■■□□□ 1.21
CLN6-204ENST00000564752 TREML2Q5T2D2 321 aa22.62■■□□□ 1.21
CLN6-204ENST00000564752 PROCA1Q8NCQ7 364 aaPredicted RBP22.62■■□□□ 1.21
CLN6-204ENST00000564752 ZNF280CQ8ND82 737 aa22.62■■□□□ 1.21
CLN6-204ENST00000564752 SMCR8Q8TEV9 937 aaPredicted RBP22.62■■□□□ 1.21
CLN6-204ENST00000564752 CCDC8Q9H0W5 538 aaPredicted RBP22.62■■□□□ 1.21
CLN6-204ENST00000564752 GABRQQ9UN88 632 aa22.62■■□□□ 1.21
CLN6-204ENST00000564752 TGFBRAP1Q8WUH2 860 aa22.61■■□□□ 1.21
CLN6-204ENST00000564752 EAF2Q96CJ1 260 aaPredicted RBP22.61■■□□□ 1.21
CLN6-204ENST00000564752 PIH1D3Q9NQM4 214 aaKnown RBP22.61■■□□□ 1.21
CLN6-204ENST00000564752 TLR7Q9NYK1 1049 aaKnown RBP22.61■■□□□ 1.21
CLN6-204ENST00000564752 USP17L5A8MUK1 530 aa22.6■■□□□ 1.21
CLN6-204ENST00000564752 METTL16Q86W50 562 aaKnown RBP22.6■■□□□ 1.21
CLN6-204ENST00000564752 MAPKAPK5Q8IW41 473 aa22.6■■□□□ 1.21
CLN6-204ENST00000564752 PNMA3Q9UL41 463 aa22.6■■□□□ 1.21
CLN6-204ENST00000564752 DDX19BQ9UMR2 479 aa22.6■■□□□ 1.21
CLN6-204ENST00000564752 COG6Q9Y2V7 657 aa22.6■■□□□ 1.21
CLN6-204ENST00000564752 DOCK1Q14185 1865 aa22.6■■□□□ 1.21
CLN6-204ENST00000564752 FOXP4Q8IVH2 680 aaPredicted RBP22.59■■□□□ 1.21
CLN6-204ENST00000564752 SLAIN1Q8ND83 568 aa22.59■■□□□ 1.21
CLN6-204ENST00000564752 NKX2-3Q8TAU0 364 aa22.59■■□□□ 1.21
CLN6-204ENST00000564752 BIN2Q9UBW5 565 aaPredicted RBP22.59■■□□□ 1.21
CLN6-204ENST00000564752 FLT1P17948 1338 aa22.58■■□□□ 1.21
CLN6-204ENST00000564752 CCL5P13501 91 aa22.58■■□□□ 1.21
CLN6-204ENST00000564752 FLT3LGP49771 235 aa22.58■■□□□ 1.21
CLN6-204ENST00000564752 HMGCS2P54868 508 aa22.58■■□□□ 1.21
CLN6-204ENST00000564752 UBXN2AP68543 259 aa22.58■■□□□ 1.21
CLN6-204ENST00000564752 SH3D19Q5HYK7 790 aa22.58■■□□□ 1.21
CLN6-204ENST00000564752 ANKRD13CQ8N6S4 541 aa22.58■■□□□ 1.21
CLN6-204ENST00000564752 SHISA4Q96DD7 197 aa22.58■■□□□ 1.21
CLN6-204ENST00000564752 PHIPQ8WWQ0 1821 aa22.58■■□□□ 1.21
CLN6-204ENST00000564752 TNPO2O14787 897 aaKnown RBP22.57■■□□□ 1.2
CLN6-204ENST00000564752 ADCY3O60266 1144 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 GJB1P08034 283 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 GJA8P48165 433 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 FAM110CQ1W6H9 321 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 WDR18Q9BV38 432 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 RNF208Q9H0X6 261 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 DNAJC18Q9H819 358 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 AS3MTQ9HBK9 375 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 PALD1Q9ULE6 856 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 MAST2Q6P0Q8 1798 aa22.57■■□□□ 1.2
CLN6-204ENST00000564752 CYP7A1P22680 504 aa22.56■■□□□ 1.2
CLN6-204ENST00000564752 DYNLL1P63167 89 aaKnown RBP22.56■■□□□ 1.2
CLN6-204ENST00000564752 JAG1P78504 1218 aa22.56■■□□□ 1.2
CLN6-204ENST00000564752 PABPC4Q13310 644 aaKnown RBP eCLIP22.56■■□□□ 1.2
CLN6-204ENST00000564752 IRF5Q13568 498 aa22.56■■□□□ 1.2
CLN6-204ENST00000564752 PXYLP1Q8TE99 480 aa22.56■■□□□ 1.2
CLN6-204ENST00000564752 CHMP4BQ9H444 224 aaKnown RBP22.56■■□□□ 1.2
CLN6-204ENST00000564752 ASNSP08243 561 aa22.55■■□□□ 1.2
CLN6-204ENST00000564752 GCLCP48506 637 aaPredicted RBP22.55■■□□□ 1.2
CLN6-204ENST00000564752 ERC1Q8IUD2 1116 aa22.55■■□□□ 1.2
CLN6-204ENST00000564752 EXOC6BQ9Y2D4 811 aa22.55■■□□□ 1.2
CLN6-204ENST00000564752 PTPRFP10586 1907 aa22.55■■□□□ 1.2
CLN6-204ENST00000564752 IDH1O75874 414 aaKnown RBP22.54■■□□□ 1.2
CLN6-204ENST00000564752 BACE1P56817 501 aa22.54■■□□□ 1.2
CLN6-204ENST00000564752 COA7Q96BR5 231 aa22.54■■□□□ 1.2
CLN6-204ENST00000564752 ASCC2Q9H1I8 757 aaPredicted RBP22.54■■□□□ 1.2
CLN6-204ENST00000564752 GINM1Q9NU53 330 aa22.54■■□□□ 1.2
CLN6-204ENST00000564752 NDUFB9Q9Y6M9 179 aa22.54■■□□□ 1.2
CLN6-204ENST00000564752 CERS3Q8IU89 383 aa22.53■■□□□ 1.2
CLN6-204ENST00000564752 CRACR2BQ8N4Y2 399 aaPredicted RBP22.53■■□□□ 1.2
CLN6-204ENST00000564752 TRIM34Q9BYJ4 488 aa22.53■■□□□ 1.2
CLN6-204ENST00000564752 UNC93B1Q9H1C4 597 aa22.53■■□□□ 1.2
CLN6-204ENST00000564752 ZBTB40Q9NUA8 1239 aa22.53■■□□□ 1.2
CLN6-204ENST00000564752 SAP30BPQ9UHR5 308 aaKnown RBP22.53■■□□□ 1.2
CLN6-204ENST00000564752 HMMRO75330 724 aa22.52■■□□□ 1.2
CLN6-204ENST00000564752 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
CLN6-204ENST00000564752 ELNP15502 786 aa22.52■■□□□ 1.2
CLN6-204ENST00000564752 MTMR2Q13614 643 aa22.52■■□□□ 1.2
CLN6-204ENST00000564752 HSP90AB4PQ58FF6 505 aa22.52■■□□□ 1.2
CLN6-204ENST00000564752 TMED8Q6PL24 325 aaPredicted RBP22.52■■□□□ 1.2
CLN6-204ENST00000564752 UBE2Q1Q7Z7E8 422 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms