RNA–Protein interactions for RNA: ENST00000564738.5

NEIL1-205, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-205ENST00000564738 OTUD7AQ8TE49 926 aaPredicted RBP22.87■■□□□ 1.25
NEIL1-205ENST00000564738 RIOK1Q9BRS2 568 aaKnown RBP22.87■■□□□ 1.25
NEIL1-205ENST00000564738 ECHDC1Q9NTX5 307 aa22.87■■□□□ 1.25
NEIL1-205ENST00000564738 PI4KBQ9UBF8 816 aa22.87■■□□□ 1.25
NEIL1-205ENST00000564738 TCRBV5S4A2TA0A5A2 114 aa22.86■■□□□ 1.25
NEIL1-205ENST00000564738 TAF1CQ15572 869 aaPredicted RBP22.86■■□□□ 1.25
NEIL1-205ENST00000564738 DHX36Q9H2U1 1008 aaKnown RBP22.86■■□□□ 1.25
NEIL1-205ENST00000564738 KCNH4Q9UQ05 1017 aa22.86■■□□□ 1.25
NEIL1-205ENST00000564738 DOCK2Q92608 1830 aa22.86■■□□□ 1.25
NEIL1-205ENST00000564738 CTU1Q7Z7A3 348 aaKnown RBP22.85■■□□□ 1.25
NEIL1-205ENST00000564738 ADD2P35612 726 aa22.84■■□□□ 1.25
NEIL1-205ENST00000564738 ANKRD45Q5TZF3 282 aa22.84■■□□□ 1.25
NEIL1-205ENST00000564738 FOXP4Q8IVH2 680 aaPredicted RBP22.84■■□□□ 1.25
NEIL1-205ENST00000564738 LCORLQ8N3X6 602 aa22.84■■□□□ 1.25
NEIL1-205ENST00000564738 DNAJC18Q9H819 358 aa22.84■■□□□ 1.25
NEIL1-205ENST00000564738 AFG3L2Q9Y4W6 797 aa22.84■■□□□ 1.25
NEIL1-205ENST00000564738 JAG1P78504 1218 aa22.83■■□□□ 1.25
NEIL1-205ENST00000564738 MOGSQ13724 837 aa22.83■■□□□ 1.25
NEIL1-205ENST00000564738 CRACR2BQ8N4Y2 399 aaPredicted RBP22.83■■□□□ 1.25
NEIL1-205ENST00000564738 ARMT1Q9H993 441 aa22.83■■□□□ 1.25
NEIL1-205ENST00000564738 ZFYVE28Q9HCC9 887 aa22.83■■□□□ 1.25
NEIL1-205ENST00000564738 COL2A1P02458 1487 aaPredicted RBP22.83■■□□□ 1.25
NEIL1-205ENST00000564738 CXCL11O14625 94 aa22.82■■□□□ 1.24
NEIL1-205ENST00000564738 PRKAB2O43741 272 aa22.82■■□□□ 1.24
NEIL1-205ENST00000564738 CAP2P40123 477 aa22.82■■□□□ 1.24
NEIL1-205ENST00000564738 SHROOM1Q2M3G4 852 aaPredicted RBP22.82■■□□□ 1.24
NEIL1-205ENST00000564738 NOM1Q5C9Z4 860 aaKnown RBP22.82■■□□□ 1.24
NEIL1-205ENST00000564738 TRIM34Q9BYJ4 488 aa22.82■■□□□ 1.24
NEIL1-205ENST00000564738 HERC5Q9UII4 1024 aaKnown RBP22.82■■□□□ 1.24
NEIL1-205ENST00000564738 TRIM75PA6NK02 468 aa22.81■■□□□ 1.24
NEIL1-205ENST00000564738 CCDC85CA6NKD9 419 aa22.81■■□□□ 1.24
NEIL1-205ENST00000564738 GDF11O95390 407 aa22.81■■□□□ 1.24
NEIL1-205ENST00000564738 HLA-DOAP06340 250 aa22.81■■□□□ 1.24
NEIL1-205ENST00000564738 EVX2Q03828 476 aa22.81■■□□□ 1.24
NEIL1-205ENST00000564738 TMED8Q6PL24 325 aaPredicted RBP22.81■■□□□ 1.24
NEIL1-205ENST00000564738 CERS3Q8IU89 383 aa22.81■■□□□ 1.24
NEIL1-205ENST00000564738 CD99L2Q8TCZ2 262 aa22.81■■□□□ 1.24
NEIL1-205ENST00000564738 SDR42E1Q8WUS8 393 aa22.81■■□□□ 1.24
NEIL1-205ENST00000564738 GPATCH3Q96I76 525 aa22.81■■□□□ 1.24
NEIL1-205ENST00000564738 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.81■■□□□ 1.244e-6■■■□□ 18.8
NEIL1-205ENST00000564738 PDHXO00330 501 aa22.8■■□□□ 1.24
NEIL1-205ENST00000564738 ECM2O94769 699 aaPredicted RBP22.8■■□□□ 1.24
NEIL1-205ENST00000564738 IRX6P78412 446 aaPredicted RBP22.8■■□□□ 1.24
NEIL1-205ENST00000564738 CAP1Q01518 475 aa22.8■■□□□ 1.24
NEIL1-205ENST00000564738 HDAC1Q13547 482 aaPredicted RBP22.8■■□□□ 1.24
NEIL1-205ENST00000564738 GPAT2Q6NUI2 795 aa22.8■■□□□ 1.24
NEIL1-205ENST00000564738 GADL1Q6ZQY3 521 aa22.8■■□□□ 1.24
NEIL1-205ENST00000564738 CRNKL1Q9BZJ0 848 aaKnown RBP22.8■■□□□ 1.24
NEIL1-205ENST00000564738 CDK5RAP2Q96SN8 1893 aa22.79■■□□□ 1.24
NEIL1-205ENST00000564738 MBD4O95243 580 aa22.79■■□□□ 1.24
NEIL1-205ENST00000564738 POLR3DP05423 398 aaPredicted RBP22.79■■□□□ 1.24
NEIL1-205ENST00000564738 PLCD1P51178 756 aa22.79■■□□□ 1.24
NEIL1-205ENST00000564738 SP3Q02447 781 aa22.79■■□□□ 1.24
NEIL1-205ENST00000564738 SPP2Q13103 211 aa22.79■■□□□ 1.24
NEIL1-205ENST00000564738 ANKRD23Q86SG2 305 aa22.79■■□□□ 1.24
NEIL1-205ENST00000564738 METTL16Q86W50 562 aaKnown RBP22.79■■□□□ 1.24
NEIL1-205ENST00000564738 A0A0G2JLL6 359 aaPredicted RBP22.78■■□□□ 1.24
NEIL1-205ENST00000564738 IGHDP01880 384 aa22.78■■□□□ 1.24
NEIL1-205ENST00000564738 UBE3CQ15386 1083 aa22.78■■□□□ 1.24
NEIL1-205ENST00000564738 PRRT2Q7Z6L0 340 aaPredicted RBP22.78■■□□□ 1.24
NEIL1-205ENST00000564738 PUS7LQ9H0K6 701 aaKnown RBP22.78■■□□□ 1.24
NEIL1-205ENST00000564738 MCM9Q9NXL9 1143 aa22.78■■□□□ 1.24
NEIL1-205ENST00000564738 ZBTB47Q9UFB7 747 aaPredicted RBP22.78■■□□□ 1.24
NEIL1-205ENST00000564738 TRIM17Q9Y577 477 aa22.78■■□□□ 1.24
NEIL1-205ENST00000564738 LAMB1P07942 1786 aa22.78■■□□□ 1.24
NEIL1-205ENST00000564738 SIPA1L1O43166 1804 aa22.78■■□□□ 1.24
NEIL1-205ENST00000564738 USP17L5A8MUK1 530 aa22.77■■□□□ 1.24
NEIL1-205ENST00000564738 CYP2D6P10635 497 aa22.77■■□□□ 1.24
NEIL1-205ENST00000564738 TTC6Q86TZ1 520 aa22.77■■□□□ 1.24
NEIL1-205ENST00000564738 PI4K2BQ8TCG2 481 aa22.77■■□□□ 1.24
NEIL1-205ENST00000564738 GCC1Q96CN9 775 aa22.77■■□□□ 1.24
NEIL1-205ENST00000564738 CPA4Q9UI42 421 aa22.77■■□□□ 1.24
NEIL1-205ENST00000564738 TLR2O60603 784 aa22.76■■□□□ 1.23
NEIL1-205ENST00000564738 CYP2C8P10632 490 aa22.76■■□□□ 1.23
NEIL1-205ENST00000564738 B4GALNT3Q6L9W6 998 aa22.76■■□□□ 1.23
NEIL1-205ENST00000564738 ZSCAN25Q6NSZ9 544 aa22.76■■□□□ 1.23
NEIL1-205ENST00000564738 KBTBD3Q8NAB2 608 aa22.76■■□□□ 1.23
NEIL1-205ENST00000564738 DCP1AQ9NPI6 582 aaPredicted RBP22.76■■□□□ 1.23
NEIL1-205ENST00000564738 MX1P20591 662 aa22.75■■□□□ 1.23
NEIL1-205ENST00000564738 FASTKD5Q7L8L6 764 aaKnown RBP22.75■■□□□ 1.23
NEIL1-205ENST00000564738 OTOP1Q7RTM1 612 aa22.75■■□□□ 1.23
NEIL1-205ENST00000564738 ZNF280CQ8ND82 737 aa22.75■■□□□ 1.23
NEIL1-205ENST00000564738 ERO1AQ96HE7 468 aa22.75■■□□□ 1.23
NEIL1-205ENST00000564738 RWDD1Q9H446 243 aaPredicted RBP22.75■■□□□ 1.23
NEIL1-205ENST00000564738 ZCCHC17Q9NP64 241 aaKnown RBP22.75■■□□□ 1.23
NEIL1-205ENST00000564738 SERPINB13Q9UIV8 391 aa22.75■■□□□ 1.23
NEIL1-205ENST00000564738 TTC41PQ6P2S7 1318 aa22.75■■□□□ 1.23
NEIL1-205ENST00000564738 FOCADQ5VW36 1801 aa22.75■■□□□ 1.23
NEIL1-205ENST00000564738 SMIM22K7EJ46 135 aa22.74■■□□□ 1.23
NEIL1-205ENST00000564738 ERC2O15083 957 aa22.74■■□□□ 1.23
NEIL1-205ENST00000564738 AAMPQ13685 434 aa22.74■■□□□ 1.23
NEIL1-205ENST00000564738 SLC4A4Q9Y6R1 1079 aa22.74■■□□□ 1.23
NEIL1-205ENST00000564738 DOCK1Q14185 1865 aa22.74■■□□□ 1.23
NEIL1-205ENST00000564738 MYH1P12882 1939 aa22.74■■□□□ 1.23
NEIL1-205ENST00000564738 CYP2D7A0A087X1C5 515 aa22.73■■□□□ 1.23
NEIL1-205ENST00000564738 RNF113AO15541 343 aaKnown RBP22.73■■□□□ 1.23
NEIL1-205ENST00000564738 GH2P01242 217 aa22.73■■□□□ 1.23
NEIL1-205ENST00000564738 HMGCS2P54868 508 aa22.73■■□□□ 1.23
NEIL1-205ENST00000564738 TREML2Q5T2D2 321 aa22.73■■□□□ 1.23
NEIL1-205ENST00000564738 TATDN1Q6P1N9 297 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms