RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 STAP2Q9UGK3 403 aa17.05■□□□□ 0.32
KNOP1-202ENST00000564480 GJD2Q9UKL4 321 aa17.05■□□□□ 0.32
KNOP1-202ENST00000564480 DOCK3Q8IZD9 2030 aa17.04■□□□□ 0.32
KNOP1-202ENST00000564480 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
KNOP1-202ENST00000564480 EVI5O60447 810 aa17.04■□□□□ 0.32
KNOP1-202ENST00000564480 PEX10O60683 326 aa17.04■□□□□ 0.32
KNOP1-202ENST00000564480 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
KNOP1-202ENST00000564480 HMGCS2P54868 508 aa17.04■□□□□ 0.32
KNOP1-202ENST00000564480 MTX1Q13505 466 aa17.04■□□□□ 0.32
KNOP1-202ENST00000564480 FAM110CQ1W6H9 321 aa17.04■□□□□ 0.32
KNOP1-202ENST00000564480 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
KNOP1-202ENST00000564480 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
KNOP1-202ENST00000564480 CAP2P40123 477 aa17.03■□□□□ 0.32
KNOP1-202ENST00000564480 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
KNOP1-202ENST00000564480 RARSP54136 660 aaKnown RBP17.03■□□□□ 0.32
KNOP1-202ENST00000564480 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
KNOP1-202ENST00000564480 SPATA5Q8NB90 893 aa17.03■□□□□ 0.32
KNOP1-202ENST00000564480 PROCA1Q8NCQ7 364 aaPredicted RBP17.03■□□□□ 0.32
KNOP1-202ENST00000564480 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
KNOP1-202ENST00000564480 COA7Q96BR5 231 aa17.03■□□□□ 0.32
KNOP1-202ENST00000564480 LRCH3Q96II8 777 aa17.03■□□□□ 0.32
KNOP1-202ENST00000564480 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.03■□□□□ 0.32
KNOP1-202ENST00000564480 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
KNOP1-202ENST00000564480 ASCC2Q9H1I8 757 aaPredicted RBP17.03■□□□□ 0.32
KNOP1-202ENST00000564480 SHROOM1Q2M3G4 852 aaPredicted RBP17.02■□□□□ 0.32
KNOP1-202ENST00000564480 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
KNOP1-202ENST00000564480 MCAMP43121 646 aa17.01■□□□□ 0.31
KNOP1-202ENST00000564480 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
KNOP1-202ENST00000564480 SH3RF3Q8TEJ3 882 aaPredicted RBP17.01■□□□□ 0.31
KNOP1-202ENST00000564480 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
KNOP1-202ENST00000564480 HDAC5Q9UQL6 1122 aa17.01■□□□□ 0.31
KNOP1-202ENST00000564480 COL2A1P02458 1487 aaPredicted RBP17■□□□□ 0.31
KNOP1-202ENST00000564480 ALPK3Q96L96 1907 aa17■□□□□ 0.31
KNOP1-202ENST00000564480 PNMA6EA0A0J9YXQ4 647 aa17■□□□□ 0.31
KNOP1-202ENST00000564480 CT47B1P0C2W7 299 aaPredicted RBP17■□□□□ 0.31
KNOP1-202ENST00000564480 ARID4AP29374 1257 aaPredicted RBP17■□□□□ 0.31
KNOP1-202ENST00000564480 DNAJC18Q9H819 358 aa17■□□□□ 0.31
KNOP1-202ENST00000564480 PNMA3Q9UL41 463 aa17■□□□□ 0.31
KNOP1-202ENST00000564480 LOC285556D6RIA3 1793 aa17■□□□□ 0.31
KNOP1-202ENST00000564480 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 HMGCRP04035 888 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 LDHCP07864 332 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 GNAI3P08754 354 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 GCLCP48506 637 aaPredicted RBP16.99■□□□□ 0.31
KNOP1-202ENST00000564480 POTEEQ6S8J3 1075 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 NECAB2Q7Z6G3 386 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 ADGRA1Q86SQ6 560 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 TRIB2Q92519 343 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 TXNRD2Q9NNW7 524 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
KNOP1-202ENST00000564480 GSTO1P78417 241 aa16.98■□□□□ 0.31
KNOP1-202ENST00000564480 GORABQ5T7V8 394 aa16.98■□□□□ 0.31
KNOP1-202ENST00000564480 ARHGAP45Q92619 1136 aa16.98■□□□□ 0.31
KNOP1-202ENST00000564480 P2RX7Q99572 595 aaKnown RBP16.98■□□□□ 0.31
KNOP1-202ENST00000564480 GDF15Q99988 308 aa16.98■□□□□ 0.31
KNOP1-202ENST00000564480 MORF4L1Q9UBU8 362 aa16.98■□□□□ 0.31
KNOP1-202ENST00000564480 ZMYND8Q9ULU4 1186 aaPredicted RBP16.98■□□□□ 0.31
KNOP1-202ENST00000564480 PLXNB2O15031 1838 aa16.98■□□□□ 0.31
KNOP1-202ENST00000564480 SIPA1L1O43166 1804 aa16.98■□□□□ 0.31
KNOP1-202ENST00000564480 RPTORQ8N122 1335 aa16.97■□□□□ 0.31
KNOP1-202ENST00000564480 LAMA3Q16787 3333 aa16.97■□□□□ 0.31
KNOP1-202ENST00000564480 A0A1W2PPC1 479 aa16.97■□□□□ 0.31
KNOP1-202ENST00000564480 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
KNOP1-202ENST00000564480 MTMR2Q13614 643 aa16.97■□□□□ 0.31
KNOP1-202ENST00000564480 C7orf61Q8IZ16 206 aa16.97■□□□□ 0.31
KNOP1-202ENST00000564480 WDR18Q9BV38 432 aa16.97■□□□□ 0.31
KNOP1-202ENST00000564480 AATFQ9NY61 560 aaKnown RBP eCLIP16.97■□□□□ 0.31
KNOP1-202ENST00000564480 LRP2BPQ9P2M1 347 aa16.97■□□□□ 0.31
KNOP1-202ENST00000564480 TRIM27P14373 513 aa16.96■□□□□ 0.31
KNOP1-202ENST00000564480 SYN1P17600 705 aa16.96■□□□□ 0.31
KNOP1-202ENST00000564480 CAPN2P17655 700 aa16.96■□□□□ 0.31
KNOP1-202ENST00000564480 CYP2B6P20813 491 aa16.96■□□□□ 0.31
KNOP1-202ENST00000564480 Q3C1V9 767 aa16.96■□□□□ 0.31
KNOP1-202ENST00000564480 MAP3K21Q5TCX8 1036 aa16.96■□□□□ 0.31
KNOP1-202ENST00000564480 MAPKAPK5Q8IW41 473 aa16.96■□□□□ 0.31
KNOP1-202ENST00000564480 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.31
KNOP1-202ENST00000564480 HMX1Q9NP08 348 aaPredicted RBP16.96■□□□□ 0.31
KNOP1-202ENST00000564480 PI4KBQ9UBF8 816 aa16.96■□□□□ 0.31
KNOP1-202ENST00000564480 RBPJLQ9UBG7 517 aa16.96■□□□□ 0.31
KNOP1-202ENST00000564480 HERC5Q9UII4 1024 aaKnown RBP16.96■□□□□ 0.31
KNOP1-202ENST00000564480 ATAD5Q96QE3 1844 aa16.96■□□□□ 0.3
KNOP1-202ENST00000564480 BACE1P56817 501 aa16.95■□□□□ 0.3
KNOP1-202ENST00000564480 PABPC4Q13310 644 aaKnown RBP eCLIP16.95■□□□□ 0.3
KNOP1-202ENST00000564480 METTL16Q86W50 562 aaKnown RBP16.95■□□□□ 0.3
KNOP1-202ENST00000564480 ANKLE1Q8NAG6 615 aa16.95■□□□□ 0.3
KNOP1-202ENST00000564480 TGFBRAP1Q8WUH2 860 aa16.95■□□□□ 0.3
KNOP1-202ENST00000564480 TBC1D2Q9BYX2 928 aa16.95■□□□□ 0.3
KNOP1-202ENST00000564480 NBPF3Q9H094 633 aa16.95■□□□□ 0.3
KNOP1-202ENST00000564480 OGDHLQ9ULD0 1010 aa16.95■□□□□ 0.3
KNOP1-202ENST00000564480 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
KNOP1-202ENST00000564480 BCAR3O75815 825 aa16.94■□□□□ 0.3
KNOP1-202ENST00000564480 GDF11O95390 407 aa16.94■□□□□ 0.3
KNOP1-202ENST00000564480 GNAI2P04899 355 aa16.94■□□□□ 0.3
KNOP1-202ENST00000564480 CYP2E1P05181 493 aaPredicted RBP16.94■□□□□ 0.3
KNOP1-202ENST00000564480 HOXA7P31268 230 aaPredicted RBP16.94■□□□□ 0.3
KNOP1-202ENST00000564480 BMP8BP34820 402 aa16.94■□□□□ 0.3
KNOP1-202ENST00000564480 PPP4CP60510 307 aa16.94■□□□□ 0.3
KNOP1-202ENST00000564480 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
KNOP1-202ENST00000564480 NAA16Q6N069 864 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms