RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 ZNF654Q8IZM8 581 aa19.16■□□□□ 0.66
CCNF-204ENST00000564333 MPNDQ8N594 471 aa19.16■□□□□ 0.66
CCNF-204ENST00000564333 TNKSO95271 1327 aa19.16■□□□□ 0.66
CCNF-204ENST00000564333 TM4SF1P30408 202 aa19.15■□□□□ 0.66
CCNF-204ENST00000564333 MECOMQ03112 1051 aa19.15■□□□□ 0.66
CCNF-204ENST00000564333 TRIM22Q8IYM9 498 aa19.15■□□□□ 0.66
CCNF-204ENST00000564333 UBE2Q2LH0YL09 131 aa19.15■□□□□ 0.66
CCNF-204ENST00000564333 NDUFA8P51970 172 aa19.15■□□□□ 0.66
CCNF-204ENST00000564333 CHAF1AQ13111 956 aaPredicted RBP19.15■□□□□ 0.66
CCNF-204ENST00000564333 TRAPPC3LQ5T215 181 aa19.15■□□□□ 0.66
CCNF-204ENST00000564333 FAM13BQ9NYF5 915 aa19.15■□□□□ 0.66
CCNF-204ENST00000564333 AFF2P51816 1311 aa19.15■□□□□ 0.66
CCNF-204ENST00000564333 CCDC196A0A1B0GTZ2 297 aa19.14■□□□□ 0.65
CCNF-204ENST00000564333 U2AF2P26368 475 aaKnown RBP eCLIP19.14■□□□□ 0.65
CCNF-204ENST00000564333 SEC23AQ15436 765 aa19.14■□□□□ 0.65
CCNF-204ENST00000564333 FAM196AQ6ZSG2 479 aa19.14■□□□□ 0.65
CCNF-204ENST00000564333 C11orf57Q6ZUT1 292 aaPredicted RBP19.14■□□□□ 0.65
CCNF-204ENST00000564333 MROH7-TTC4A0A0A0MT08 1334 aa19.14■□□□□ 0.65
CCNF-204ENST00000564333 IRS2Q9Y4H2 1338 aa19.14■□□□□ 0.65
CCNF-204ENST00000564333 CYP2D7A0A087X1C5 515 aa19.13■□□□□ 0.65
CCNF-204ENST00000564333 SMIM22K7EJ46 135 aa19.13■□□□□ 0.65
CCNF-204ENST00000564333 GTF2F1P35269 517 aaKnown RBP eCLIP19.13■□□□□ 0.65
CCNF-204ENST00000564333 SLC39A14Q15043 492 aa19.13■□□□□ 0.65
CCNF-204ENST00000564333 NUP133Q8WUM0 1156 aa19.13■□□□□ 0.65
CCNF-204ENST00000564333 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.13■□□□□ 0.65
CCNF-204ENST00000564333 PCP11498 1178 aaKnown RBP19.13■□□□□ 0.65
CCNF-204ENST00000564333 PRDX5P30044 214 aa19.13■□□□□ 0.65
CCNF-204ENST00000564333 NFIXQ14938 502 aa19.13■□□□□ 0.65
CCNF-204ENST00000564333 AXDND1Q5T1B0 1012 aaPredicted RBP19.13■□□□□ 0.65
CCNF-204ENST00000564333 NBPF11Q86T75 865 aa19.13■□□□□ 0.65
CCNF-204ENST00000564333 CNBD1Q8NA66 436 aa19.13■□□□□ 0.65
CCNF-204ENST00000564333 ZNF830Q96NB3 372 aaPredicted RBP19.13■□□□□ 0.65
CCNF-204ENST00000564333 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.13■□□□□ 0.65
CCNF-204ENST00000564333 DEXIO95424 95 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 GUCY1A2P33402 732 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 GRAPQ13588 217 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 GRAPLQ8TC17 118 aaPredicted RBP19.12■□□□□ 0.65
CCNF-204ENST00000564333 CRNKL1Q9BZJ0 848 aaKnown RBP19.12■□□□□ 0.65
CCNF-204ENST00000564333 TTC12Q9H892 705 aaPredicted RBP19.12■□□□□ 0.65
CCNF-204ENST00000564333 ANO10Q9NW15 660 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 AATFQ9NY61 560 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCNF-204ENST00000564333 ZBTB22O15209 634 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 PPP6R2O75170 966 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 MMP1P03956 469 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 CTR9Q6PD62 1173 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 TXNRD3Q86VQ6 643 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 JMYQ8N9B5 988 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 FANCBQ8NB91 859 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 SPC24Q8NBT2 197 aa19.12■□□□□ 0.65
CCNF-204ENST00000564333 ZSCAN10Q96SZ4 725 aaPredicted RBP19.12■□□□□ 0.65
CCNF-204ENST00000564333 NAV1Q8NEY1 1877 aa19.11■□□□□ 0.65
CCNF-204ENST00000564333 WDHD1O75717 1129 aaPredicted RBP19.11■□□□□ 0.65
CCNF-204ENST00000564333 PFKFB1P16118 471 aa19.11■□□□□ 0.65
CCNF-204ENST00000564333 CMA1P23946 247 aa19.11■□□□□ 0.65
CCNF-204ENST00000564333 MARCKSP29966 332 aaPredicted RBP19.11■□□□□ 0.65
CCNF-204ENST00000564333 IQCB1Q15051 598 aa19.11■□□□□ 0.65
CCNF-204ENST00000564333 PTPAQ15257 358 aa19.11■□□□□ 0.65
CCNF-204ENST00000564333 SAFBQ15424 915 aaKnown RBP eCLIP19.11■□□□□ 0.65
CCNF-204ENST00000564333 TMED8Q6PL24 325 aaPredicted RBP19.11■□□□□ 0.65
CCNF-204ENST00000564333 CRACR2BQ8N4Y2 399 aaPredicted RBP19.11■□□□□ 0.65
CCNF-204ENST00000564333 ENAHQ8N8S7 591 aaPredicted RBP19.11■□□□□ 0.65
CCNF-204ENST00000564333 MAP3K14Q99558 947 aa19.11■□□□□ 0.65
CCNF-204ENST00000564333 SDF4Q9BRK5 362 aa19.11■□□□□ 0.65
CCNF-204ENST00000564333 GOLGA6L19H0YKK7 550 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 FGRP09769 529 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 ADRA2BP18089 450 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 RBM10P98175 930 aaKnown RBP19.1■□□□□ 0.65
CCNF-204ENST00000564333 PLA2G4DQ86XP0 818 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 SEPT12Q8IYM1 358 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 USP17L12C9JPN9 530 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 USP17L21D6R901 530 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 PRDM1O75626 825 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 ZNF75DP51815 510 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 IFIT1BQ5T764 474 aaKnown RBP19.1■□□□□ 0.65
CCNF-204ENST00000564333 IQCA1Q86XH1 822 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 DZIP1Q86YF9 867 aaKnown RBP19.1■□□□□ 0.65
CCNF-204ENST00000564333 NOSTRINQ8IVI9 506 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 CEP57L1Q8IYX8 460 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 CMTR1Q8N1G2 835 aaKnown RBP19.1■□□□□ 0.65
CCNF-204ENST00000564333 TRIM5Q9C035 493 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 BCL11BQ9C0K0 894 aaPredicted RBP19.1■□□□□ 0.65
CCNF-204ENST00000564333 DCP1AQ9NPI6 582 aaPredicted RBP19.1■□□□□ 0.65
CCNF-204ENST00000564333 LRRC4BQ9NT99 713 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 ANKIB1Q9P2G1 1089 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 JAG2Q9Y219 1238 aa19.1■□□□□ 0.65
CCNF-204ENST00000564333 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.1■□□□□ 0.65
CCNF-204ENST00000564333 ONECUT3O60422 494 aaPredicted RBP19.09■□□□□ 0.65
CCNF-204ENST00000564333 PPP2R5BQ15173 497 aa19.09■□□□□ 0.65
CCNF-204ENST00000564333 SPTY2D1Q68D10 685 aaPredicted RBP19.09■□□□□ 0.65
CCNF-204ENST00000564333 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.09■□□□□ 0.65
CCNF-204ENST00000564333 SLC51AQ86UW1 340 aa19.09■□□□□ 0.65
CCNF-204ENST00000564333 DIS3L2Q8IYB7 885 aaKnown RBP19.09■□□□□ 0.65
CCNF-204ENST00000564333 CCDC82Q8N4S0 544 aa19.09■□□□□ 0.65
CCNF-204ENST00000564333 ERCC4Q92889 916 aaPredicted RBP19.09■□□□□ 0.65
CCNF-204ENST00000564333 RNF26Q9BY78 433 aaPredicted RBP19.09■□□□□ 0.65
CCNF-204ENST00000564333 ATP8A2Q9NTI2 1148 aa19.09■□□□□ 0.65
CCNF-204ENST00000564333 ARPP21Q9UBL0 812 aaPredicted RBP19.09■□□□□ 0.65
CCNF-204ENST00000564333 TRPC5Q9UL62 973 aaPredicted RBP19.09■□□□□ 0.65
CCNF-204ENST00000564333 KCNJ14Q9UNX9 436 aa19.09■□□□□ 0.65
CCNF-204ENST00000564333 XDHP47989 1333 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms