RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 RGPD1P0DJD0 1748 aa13.98□□□□□ -0.17
SCAMP2-204ENST00000563829 GRIN2DO15399 1336 aa13.98□□□□□ -0.17
SCAMP2-204ENST00000563829 A0A1B0GTH6 734 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 ZEB2O60315 1214 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 POSTNQ15063 836 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 OVOS2A0A0J9YW53 1432 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 OVOS2Q6IE36 1432 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 GOLIM4O00461 696 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 MCM3P25205 808 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 AMPD2Q01433 879 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 ACTN3Q08043 901 aaPredicted RBP13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 PDCLQ13371 301 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 RNF187Q5TA31 235 aaPredicted RBP13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 KSR2Q6VAB6 950 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 ANKRD18AQ8IVF6 992 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 MIEF2Q96C03 454 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 DBF4Q9UBU7 674 aaPredicted RBP13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 MON2Q7Z3U7 1717 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 POLR2DO15514 142 aaKnown RBP13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 HSPD1P10809 573 aaKnown RBP13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 CDC25AP30304 524 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 FKBP15Q5T1M5 1219 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 MLKLQ8NB16 471 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 CAGE1Q8TC20 777 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 VEZTQ9HBM0 779 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 DACH1Q9UI36 760 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 TFR2Q9UP52 801 aa13.97□□□□□ -0.17
SCAMP2-204ENST00000563829 FRMD3A2A2Y4 597 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 PAX7P23759 505 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 ARHGAP25P42331 645 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 ERVK-24P63145 666 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 TNNI3KQ59H18 835 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 TTC39AQ5SRH9 613 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 CEP57Q86XR8 500 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 ODF2LQ9ULJ1 636 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 FPGT-TNNI3KV9GXZ4 949 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 NCAPD2Q15021 1401 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 CHUKO15111 745 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 COBLO75128 1261 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 PPP6R2O75170 966 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 CCT6AP40227 531 aaKnown RBP13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 FNTAP49354 379 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 ATP1A2P50993 1020 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 PTPAQ15257 358 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 SERTAD1Q9UHV2 236 aa13.96□□□□□ -0.17
SCAMP2-204ENST00000563829 GYPCP04921 128 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 RXRAP19793 462 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 TRHP20396 242 aaPredicted RBP13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 MRPS25P82663 173 aaKnown RBP13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 TRDNQ13061 729 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 SND1Q7KZF4 910 aaKnown RBP eCLIP13.95□□□□□ -0.181e-8■■■■■ 45.8
SCAMP2-204ENST00000563829 ALG1Q9BT22 464 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 WWC3Q9ULE0 1092 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 METP08581 1390 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 ATP1A1P05023 1023 aaKnown RBP13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 B4GALNT4Q76KP1 1039 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 CNGA4Q8IV77 575 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 RRP36Q96EU6 259 aaKnown RBP13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 NUP88Q99567 741 aaPredicted RBP13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 BABAM1Q9NWV8 329 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 LAMA4Q16363 1823 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 SBNO1A3KN83 1393 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 MEFVO15553 781 aaPredicted RBP13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 MDM2Q00987 491 aaPredicted RBP13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 KBTBD3Q8NAB2 608 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 MCM8Q9UJA3 840 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 HPS5Q9UPZ3 1129 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 SAR1BQ9Y6B6 198 aa13.95□□□□□ -0.18
SCAMP2-204ENST00000563829 SPATA31D1Q6ZQQ2 1576 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 PRC1O43663 620 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 SSBP05455 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 GRIN1Q05586 938 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 DDR1Q08345 913 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 HSP90AB3PQ58FF7 597 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 EPHA10Q5JZY3 1008 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 KCTD16Q68DU8 428 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 CCNI2Q6ZMN8 369 aaPredicted RBP13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 STAG1Q8WVM7 1258 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 NEUROD6Q96NK8 337 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 MLH3Q9UHC1 1453 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 C21orf2O43822 256 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 FILIP1LQ4L180 1135 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 KRT40Q6A162 431 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 TRAPPC11Q7Z392 1133 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 TMTC1Q8IUR5 882 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 KIRREL3Q8IZU9 778 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 LINS1Q8NG48 757 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 ANKRD24Q8TF21 1146 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 DSCC1Q9BVC3 393 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 SEC31BQ9NQW1 1179 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 KLC4Q9NSK0 619 aa13.94□□□□□ -0.18
SCAMP2-204ENST00000563829 PPP1R12AO14974 1030 aaPredicted RBP13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 ZNF185O15231 689 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 EGFL6Q8IUX8 553 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 PHKBQ93100 1093 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 HAUS7Q99871 368 aa13.93□□□□□ -0.18
SCAMP2-204ENST00000563829 RNF225M0QZC1 329 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms