RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 SURF6O75683 361 aaKnown RBP25.75■■□□□ 1.71
CHD9-208ENST00000563410 GRK4P32298 578 aa25.75■■□□□ 1.71
CHD9-208ENST00000563410 TTC39AQ5SRH9 613 aa25.75■■□□□ 1.71
CHD9-208ENST00000563410 RAET1EQ8TD07 263 aa25.75■■□□□ 1.71
CHD9-208ENST00000563410 ZBTB7BO15156 539 aaPredicted RBP25.74■■□□□ 1.71
CHD9-208ENST00000563410 CYP2E1P05181 493 aaPredicted RBP25.74■■□□□ 1.71
CHD9-208ENST00000563410 FCGRTP55899 365 aa25.74■■□□□ 1.71
CHD9-208ENST00000563410 PRKCZQ05513 592 aa25.74■■□□□ 1.71
CHD9-208ENST00000563410 OS9Q13438 667 aaPredicted RBP25.74■■□□□ 1.71
CHD9-208ENST00000563410 RRP1BQ14684 758 aaKnown RBP25.74■■□□□ 1.71
CHD9-208ENST00000563410 CCDC158Q5M9N0 1113 aa25.74■■□□□ 1.71
CHD9-208ENST00000563410 AGTPBP1Q9UPW5 1226 aa25.74■■□□□ 1.71
CHD9-208ENST00000563410 NOP58Q9Y2X3 529 aaKnown RBP25.74■■□□□ 1.71
CHD9-208ENST00000563410 FTSJ3Q8IY81 847 aaKnown RBP25.73■■□□□ 1.71
CHD9-208ENST00000563410 GCC1Q96CN9 775 aa25.73■■□□□ 1.71
CHD9-208ENST00000563410 ZNF512BQ96KM6 892 aaPredicted RBP25.73■■□□□ 1.71
CHD9-208ENST00000563410 GABRQQ9UN88 632 aa25.73■■□□□ 1.71
CHD9-208ENST00000563410 CAP2P40123 477 aa25.72■■□□□ 1.71
CHD9-208ENST00000563410 TREML2Q5T2D2 321 aa25.72■■□□□ 1.71
CHD9-208ENST00000563410 NAA16Q6N069 864 aaPredicted RBP25.72■■□□□ 1.71
CHD9-208ENST00000563410 ADGRA1Q86SQ6 560 aa25.72■■□□□ 1.71
CHD9-208ENST00000563410 ITPRIPQ8IWB1 547 aa25.72■■□□□ 1.71
CHD9-208ENST00000563410 SHISA4Q96DD7 197 aa25.72■■□□□ 1.71
CHD9-208ENST00000563410 AATFQ9NY61 560 aaKnown RBP eCLIP25.72■■□□□ 1.71
CHD9-208ENST00000563410 PPP4CP60510 307 aa25.71■■□□□ 1.71
CHD9-208ENST00000563410 DBNLQ9UJU6 430 aaKnown RBP25.71■■□□□ 1.71
CHD9-208ENST00000563410 ZAP70P43403 619 aa25.7■■□□□ 1.7
CHD9-208ENST00000563410 SPP2Q13103 211 aa25.7■■□□□ 1.7
CHD9-208ENST00000563410 PROCA1Q8NCQ7 364 aaPredicted RBP25.7■■□□□ 1.7
CHD9-208ENST00000563410 NOL10Q9BSC4 688 aaKnown RBP25.7■■□□□ 1.7
CHD9-208ENST00000563410 TLR7Q9NYK1 1049 aaKnown RBP25.7■■□□□ 1.7
CHD9-208ENST00000563410 HERC5Q9UII4 1024 aaKnown RBP25.7■■□□□ 1.7
CHD9-208ENST00000563410 MYH1P12882 1939 aa25.69■■□□□ 1.7
CHD9-208ENST00000563410 BAG3O95817 575 aa25.69■■□□□ 1.7
CHD9-208ENST00000563410 ZNF280CQ8ND82 737 aa25.69■■□□□ 1.7
CHD9-208ENST00000563410 SMCR8Q8TEV9 937 aaPredicted RBP25.69■■□□□ 1.7
CHD9-208ENST00000563410 PIH1D3Q9NQM4 214 aaKnown RBP25.69■■□□□ 1.7
CHD9-208ENST00000563410 PI4KBQ9UBF8 816 aa25.69■■□□□ 1.7
CHD9-208ENST00000563410 CCL5P13501 91 aa25.68■■□□□ 1.7
CHD9-208ENST00000563410 TGFBRAP1Q8WUH2 860 aa25.68■■□□□ 1.7
CHD9-208ENST00000563410 EAF2Q96CJ1 260 aaPredicted RBP25.68■■□□□ 1.7
CHD9-208ENST00000563410 TBC1D2Q9BYX2 928 aa25.68■■□□□ 1.7
CHD9-208ENST00000563410 CCDC8Q9H0W5 538 aaPredicted RBP25.68■■□□□ 1.7
CHD9-208ENST00000563410 DHX36Q9H2U1 1008 aaKnown RBP25.68■■□□□ 1.7
CHD9-208ENST00000563410 FLT1P17948 1338 aa25.67■■□□□ 1.7
CHD9-208ENST00000563410 USP17L5A8MUK1 530 aa25.67■■□□□ 1.7
CHD9-208ENST00000563410 PLCG2P16885 1265 aa25.67■■□□□ 1.7
CHD9-208ENST00000563410 HMGCS2P54868 508 aa25.67■■□□□ 1.7
CHD9-208ENST00000563410 HABP4Q5JVS0 413 aaKnown RBP25.67■■□□□ 1.7
CHD9-208ENST00000563410 MAPKAPK5Q8IW41 473 aa25.67■■□□□ 1.7
CHD9-208ENST00000563410 ANKRD13CQ8N6S4 541 aa25.67■■□□□ 1.7
CHD9-208ENST00000563410 SLAIN1Q8ND83 568 aa25.67■■□□□ 1.7
CHD9-208ENST00000563410 DNAJC18Q9H819 358 aa25.67■■□□□ 1.7
CHD9-208ENST00000563410 PCDH10Q9P2E7 1040 aa25.67■■□□□ 1.7
CHD9-208ENST00000563410 IGSF3O75054 1194 aa25.66■■□□□ 1.7
CHD9-208ENST00000563410 GJB1P08034 283 aa25.66■■□□□ 1.7
CHD9-208ENST00000563410 FLT3LGP49771 235 aa25.66■■□□□ 1.7
CHD9-208ENST00000563410 SH3D19Q5HYK7 790 aa25.66■■□□□ 1.7
CHD9-208ENST00000563410 CEP85Q6P2H3 762 aa25.66■■□□□ 1.7
CHD9-208ENST00000563410 METTL16Q86W50 562 aaKnown RBP25.66■■□□□ 1.7
CHD9-208ENST00000563410 PNMA3Q9UL41 463 aa25.66■■□□□ 1.7
CHD9-208ENST00000563410 TNPO2O14787 897 aaKnown RBP25.65■■□□□ 1.7
CHD9-208ENST00000563410 ADCY3O60266 1144 aa25.65■■□□□ 1.7
CHD9-208ENST00000563410 GJA8P48165 433 aa25.65■■□□□ 1.7
CHD9-208ENST00000563410 UBXN2AP68543 259 aa25.65■■□□□ 1.7
CHD9-208ENST00000563410 JAG1P78504 1218 aa25.65■■□□□ 1.7
CHD9-208ENST00000563410 NKX2-3Q8TAU0 364 aa25.65■■□□□ 1.7
CHD9-208ENST00000563410 RNF208Q9H0X6 261 aa25.65■■□□□ 1.7
CHD9-208ENST00000563410 BIN2Q9UBW5 565 aaPredicted RBP25.65■■□□□ 1.7
CHD9-208ENST00000563410 DYNLL1P63167 89 aaKnown RBP25.64■■□□□ 1.7
CHD9-208ENST00000563410 FAM110CQ1W6H9 321 aa25.64■■□□□ 1.7
CHD9-208ENST00000563410 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.7
CHD9-208ENST00000563410 PALD1Q9ULE6 856 aa25.64■■□□□ 1.7
CHD9-208ENST00000563410 ZBED9Q6R2W3 1325 aa25.63■■□□□ 1.69
CHD9-208ENST00000563410 IRF5Q13568 498 aa25.63■■□□□ 1.69
CHD9-208ENST00000563410 UBE2Q1Q7Z7E8 422 aa25.63■■□□□ 1.69
CHD9-208ENST00000563410 WDR18Q9BV38 432 aa25.63■■□□□ 1.69
CHD9-208ENST00000563410 UNC93B1Q9H1C4 597 aa25.63■■□□□ 1.69
CHD9-208ENST00000563410 AS3MTQ9HBK9 375 aa25.63■■□□□ 1.69
CHD9-208ENST00000563410 PLXNB2O15031 1838 aa25.63■■□□□ 1.69
CHD9-208ENST00000563410 ELNP15502 786 aa25.62■■□□□ 1.69
CHD9-208ENST00000563410 SHROOM1Q2M3G4 852 aaPredicted RBP25.62■■□□□ 1.69
CHD9-208ENST00000563410 FOXP4Q8IVH2 680 aaPredicted RBP25.62■■□□□ 1.69
CHD9-208ENST00000563410 PANK1Q8TE04 598 aa25.62■■□□□ 1.69
CHD9-208ENST00000563410 PXYLP1Q8TE99 480 aa25.62■■□□□ 1.69
CHD9-208ENST00000563410 ASCC2Q9H1I8 757 aaPredicted RBP25.62■■□□□ 1.69
CHD9-208ENST00000563410 NDUFB9Q9Y6M9 179 aa25.62■■□□□ 1.69
CHD9-208ENST00000563410 CYP7A1P22680 504 aa25.61■■□□□ 1.69
CHD9-208ENST00000563410 PABPC4Q13310 644 aaKnown RBP eCLIP25.61■■□□□ 1.69
CHD9-208ENST00000563410 EXOC6BQ9Y2D4 811 aa25.61■■□□□ 1.69
CHD9-208ENST00000563410 TRIOBPQ9H2D6 2365 aa25.61■■□□□ 1.69
CHD9-208ENST00000563410 ASNSP08243 561 aa25.6■■□□□ 1.69
CHD9-208ENST00000563410 GCLCP48506 637 aaPredicted RBP25.6■■□□□ 1.69
CHD9-208ENST00000563410 U2AF1L4Q8WU68 220 aaKnown RBP25.6■■□□□ 1.69
CHD9-208ENST00000563410 ANTXR1Q9H6X2 564 aa25.6■■□□□ 1.69
CHD9-208ENST00000563410 SAP30BPQ9UHR5 308 aaKnown RBP25.6■■□□□ 1.69
CHD9-208ENST00000563410 IDH1O75874 414 aaKnown RBP25.59■■□□□ 1.69
CHD9-208ENST00000563410 GDF11O95390 407 aa25.59■■□□□ 1.69
CHD9-208ENST00000563410 INHAP05111 366 aa25.59■■□□□ 1.69
CHD9-208ENST00000563410 BACE1P56817 501 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms