RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 CTNND1O60716 968 aaKnown RBP34.27■■■■□ 3.08
NME3-203ENST00000563367 USP5P45974 858 aa34.26■■■■□ 3.08
NME3-203ENST00000563367 SNAPC2Q13487 334 aa34.26■■■■□ 3.08
NME3-203ENST00000563367 IFFO2Q5TF58 517 aa34.26■■■■□ 3.08
NME3-203ENST00000563367 ANKRD45Q5TZF3 282 aa34.26■■■■□ 3.08
NME3-203ENST00000563367 OTUD7BQ6GQQ9 843 aa34.26■■■■□ 3.08
NME3-203ENST00000563367 GCC1Q96CN9 775 aa34.26■■■■□ 3.08
NME3-203ENST00000563367 NAV1Q8NEY1 1877 aa34.25■■■■□ 3.07
NME3-203ENST00000563367 PTPRAP18433 802 aa34.25■■■■□ 3.07
NME3-203ENST00000563367 RRP1BQ14684 758 aaKnown RBP34.25■■■■□ 3.07
NME3-203ENST00000563367 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.25■■■■□ 3.075e-32■■■■□ 24.1
NME3-203ENST00000563367 PICK1Q9NRD5 415 aa34.25■■■■□ 3.07
NME3-203ENST00000563367 FRMD4AQ9P2Q2 1039 aaPredicted RBP34.25■■■■□ 3.07
NME3-203ENST00000563367 PTPRFP10586 1907 aa34.25■■■■□ 3.07
NME3-203ENST00000563367 DDX60LQ5H9U9 1706 aaKnown RBP34.24■■■■□ 3.07
NME3-203ENST00000563367 GPR25O00155 361 aa34.24■■■■□ 3.07
NME3-203ENST00000563367 CETPP11597 493 aa34.24■■■■□ 3.07
NME3-203ENST00000563367 SLC4A8Q2Y0W8 1093 aa34.24■■■■□ 3.07
NME3-203ENST00000563367 FAM43AQ8N2R8 423 aa34.24■■■■□ 3.07
NME3-203ENST00000563367 ZNF296Q8WUU4 475 aaPredicted RBP34.24■■■■□ 3.07
NME3-203ENST00000563367 HERC5Q9UII4 1024 aaKnown RBP34.24■■■■□ 3.07
NME3-203ENST00000563367 KCNH4Q9UQ05 1017 aa34.24■■■■□ 3.07
NME3-203ENST00000563367 METTL16Q86W50 562 aaKnown RBP34.23■■■■□ 3.07
NME3-203ENST00000563367 LCORLQ8N3X6 602 aa34.23■■■■□ 3.07
NME3-203ENST00000563367 DNAJC18Q9H819 358 aa34.23■■■■□ 3.07
NME3-203ENST00000563367 CRHR2Q13324 411 aa34.22■■■■□ 3.07
NME3-203ENST00000563367 NOM1Q5C9Z4 860 aaKnown RBP34.22■■■■□ 3.07
NME3-203ENST00000563367 PI4K2BQ8TCG2 481 aa34.22■■■■□ 3.07
NME3-203ENST00000563367 ZHX2Q9Y6X8 837 aa34.22■■■■□ 3.07
NME3-203ENST00000563367 TTC41PQ6P2S7 1318 aa34.22■■■■□ 3.07
NME3-203ENST00000563367 IGHDP01880 384 aa34.21■■■■□ 3.07
NME3-203ENST00000563367 FOXP4Q8IVH2 680 aaPredicted RBP34.21■■■■□ 3.07
NME3-203ENST00000563367 SALL3Q9BXA9 1300 aa34.21■■■■□ 3.07
NME3-203ENST00000563367 BTBD19C9JJ37 291 aa34.2■■■■□ 3.07
NME3-203ENST00000563367 UBE3CQ15386 1083 aa34.2■■■■□ 3.07
NME3-203ENST00000563367 CCDC84Q86UT8 332 aaPredicted RBP34.2■■■■□ 3.07
NME3-203ENST00000563367 CRNKL1Q9BZJ0 848 aaKnown RBP34.2■■■■□ 3.07
NME3-203ENST00000563367 RWDD1Q9H446 243 aaPredicted RBP34.2■■■■□ 3.07
NME3-203ENST00000563367 ARMT1Q9H993 441 aa34.2■■■■□ 3.07
NME3-203ENST00000563367 AFG3L2Q9Y4W6 797 aa34.2■■■■□ 3.07
NME3-203ENST00000563367 BAZ2AQ9UIF9 1905 aaKnown RBP34.2■■■■□ 3.06
NME3-203ENST00000563367 MX1P20591 662 aa34.19■■■■□ 3.06
NME3-203ENST00000563367 IRX6P78412 446 aaPredicted RBP34.19■■■■□ 3.06
NME3-203ENST00000563367 MOGSQ13724 837 aa34.19■■■■□ 3.06
NME3-203ENST00000563367 HLA-DOAP06340 250 aa34.18■■■■□ 3.06
NME3-203ENST00000563367 CAP2P40123 477 aa34.18■■■■□ 3.06
NME3-203ENST00000563367 CRACR2BQ8N4Y2 399 aaPredicted RBP34.18■■■■□ 3.06
NME3-203ENST00000563367 KBTBD3Q8NAB2 608 aa34.18■■■■□ 3.06
NME3-203ENST00000563367 ZBTB47Q9UFB7 747 aaPredicted RBP34.18■■■■□ 3.06
NME3-203ENST00000563367 CXCL11O14625 94 aa34.17■■■■□ 3.06
NME3-203ENST00000563367 MBD4O95243 580 aa34.17■■■■□ 3.06
NME3-203ENST00000563367 DGKZQ13574 1117 aa34.17■■■■□ 3.06
NME3-203ENST00000563367 ZSCAN25Q6NSZ9 544 aa34.17■■■■□ 3.06
NME3-203ENST00000563367 SMC5Q8IY18 1101 aa34.17■■■■□ 3.06
NME3-203ENST00000563367 SDR42E1Q8WUS8 393 aa34.17■■■■□ 3.06
NME3-203ENST00000563367 ERC2O15083 957 aa34.16■■■■□ 3.06
NME3-203ENST00000563367 FKTNO75072 461 aa34.16■■■■□ 3.06
NME3-203ENST00000563367 TAF1CQ15572 869 aaPredicted RBP34.16■■■■□ 3.06
NME3-203ENST00000563367 MCOLN1Q9GZU1 580 aa34.16■■■■□ 3.06
NME3-203ENST00000563367 PRKAB2O43741 272 aa34.15■■■■□ 3.06
NME3-203ENST00000563367 GLRX3O76003 335 aaKnown RBP34.15■■■■□ 3.06
NME3-203ENST00000563367 JAG1P78504 1218 aa34.15■■■■□ 3.06
NME3-203ENST00000563367 TRIM34Q9BYJ4 488 aa34.15■■■■□ 3.06
NME3-203ENST00000563367 PUS7LQ9H0K6 701 aaKnown RBP34.15■■■■□ 3.06
NME3-203ENST00000563367 PLCD1P51178 756 aa34.14■■■■□ 3.06
NME3-203ENST00000563367 SHROOM1Q2M3G4 852 aaPredicted RBP34.14■■■■□ 3.06
NME3-203ENST00000563367 ZCCHC17Q9NP64 241 aaKnown RBP34.14■■■■□ 3.06
NME3-203ENST00000563367 DCP1AQ9NPI6 582 aaPredicted RBP34.14■■■■□ 3.06
NME3-203ENST00000563367 A0A0G2JLL6 359 aaPredicted RBP34.13■■■■□ 3.05
NME3-203ENST00000563367 EVX2Q03828 476 aa34.13■■■■□ 3.05
NME3-203ENST00000563367 PRRT2Q7Z6L0 340 aaPredicted RBP34.13■■■■□ 3.05
NME3-203ENST00000563367 TTC6Q86TZ1 520 aa34.13■■■■□ 3.05
NME3-203ENST00000563367 TRIM75PA6NK02 468 aa34.12■■■■□ 3.05
NME3-203ENST00000563367 B4GALNT3Q6L9W6 998 aa34.12■■■■□ 3.05
NME3-203ENST00000563367 CTU1Q7Z7A3 348 aaKnown RBP34.12■■■■□ 3.05
NME3-203ENST00000563367 ANKRD23Q86SG2 305 aa34.12■■■■□ 3.05
NME3-203ENST00000563367 LNPKQ9C0E8 428 aa34.12■■■■□ 3.05
NME3-203ENST00000563367 EHD4Q9H223 541 aa34.12■■■■□ 3.05
NME3-203ENST00000563367 ZFYVE28Q9HCC9 887 aa34.12■■■■□ 3.05
NME3-203ENST00000563367 MCM9Q9NXL9 1143 aa34.12■■■■□ 3.05
NME3-203ENST00000563367 STAP2Q9UGK3 403 aa34.12■■■■□ 3.05
NME3-203ENST00000563367 SERPINB13Q9UIV8 391 aa34.12■■■■□ 3.05
NME3-203ENST00000563367 POLR3DP05423 398 aaPredicted RBP34.11■■■■□ 3.05
NME3-203ENST00000563367 GPAT2Q6NUI2 795 aa34.11■■■■□ 3.05
NME3-203ENST00000563367 ABHD8Q96I13 439 aa34.11■■■■□ 3.05
NME3-203ENST00000563367 RNF113AO15541 343 aaKnown RBP34.1■■■■□ 3.05
NME3-203ENST00000563367 GDF11O95390 407 aa34.1■■■■□ 3.05
NME3-203ENST00000563367 PDHXO00330 501 aa34.09■■■■□ 3.05
NME3-203ENST00000563367 CAPN15O75808 1086 aa34.09■■■■□ 3.05
NME3-203ENST00000563367 PDE1AP54750 535 aa34.09■■■■□ 3.05
NME3-203ENST00000563367 TATDN1Q6P1N9 297 aa34.09■■■■□ 3.05
NME3-203ENST00000563367 USP17L5A8MUK1 530 aa34.08■■■■□ 3.05
NME3-203ENST00000563367 CYP2D6P10635 497 aa34.08■■■■□ 3.05
NME3-203ENST00000563367 SPP2Q13103 211 aa34.08■■■■□ 3.05
NME3-203ENST00000563367 ZNF280CQ8ND82 737 aa34.08■■■■□ 3.05
NME3-203ENST00000563367 OSBP2Q969R2 916 aa34.08■■■■□ 3.05
NME3-203ENST00000563367 ATP8A2Q9NTI2 1148 aa34.08■■■■□ 3.05
NME3-203ENST00000563367 MYH8P13535 1937 aa34.07■■■■□ 3.04
NME3-203ENST00000563367 ASNSP08243 561 aa34.07■■■■□ 3.04
NME3-203ENST00000563367 GADL1Q6ZQY3 521 aa34.07■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms