RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 SLX4Q8IY92 1834 aa11.49□□□□□ -0.57
UBFD1-202ENST00000563366 MYH2Q9UKX2 1941 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 MAGEB6P1A0A0J9YX57 407 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 POTEB3A0JP26 581 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 MBD4O95243 580 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 FGAP02671 866 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 CHGBP05060 677 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 LDHBP07195 334 aaKnown RBP11.48□□□□□ -0.57
UBFD1-202ENST00000563366 LDHCP07864 332 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 PDIA4P13667 645 aaKnown RBP11.48□□□□□ -0.57
UBFD1-202ENST00000563366 AK2P54819 239 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 TRDNQ13061 729 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 CHAF1AQ13111 956 aaPredicted RBP11.48□□□□□ -0.57
UBFD1-202ENST00000563366 CUL4AQ13619 759 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 MYSM1Q5VVJ2 828 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 GIMAP6Q6P9H5 292 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 POTEBQ6S5H4 581 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 RALYLQ86SE5 291 aaKnown RBP11.48□□□□□ -0.57
UBFD1-202ENST00000563366 SUPT20HQ8NEM7 779 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 NOL10Q9BSC4 688 aaKnown RBP11.48□□□□□ -0.57
UBFD1-202ENST00000563366 ZC3H12CQ9C0D7 883 aaKnown RBP11.48□□□□□ -0.57
UBFD1-202ENST00000563366 NAPBQ9H115 298 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 SUGT1Q9Y2Z0 365 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.48□□□□□ -0.57
UBFD1-202ENST00000563366 WDR19Q8NEZ3 1342 aa11.48□□□□□ -0.57
UBFD1-202ENST00000563366 E7EWF7 191 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 POLD1P28340 1107 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 NT5C2P49902 561 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 NUCB2P80303 420 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 FGD1P98174 961 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 SLFNL1Q499Z3 407 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 SWT1Q5T5J6 900 aaKnown RBP11.47□□□□□ -0.57
UBFD1-202ENST00000563366 DHX32Q7L7V1 743 aaKnown RBP11.47□□□□□ -0.57
UBFD1-202ENST00000563366 TXNRD3Q86VQ6 643 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 NCOA7Q8NI08 942 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 NSUN4Q96CB9 384 aaKnown RBP11.47□□□□□ -0.57
UBFD1-202ENST00000563366 CNNM2Q9H8M5 875 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 CD209Q9NNX6 404 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 POLR3EQ9NVU0 708 aa11.47□□□□□ -0.57
UBFD1-202ENST00000563366 FAM205AQ6ZU69 1335 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 WTIPA6NIX2 430 aaPredicted RBP11.46□□□□□ -0.57
UBFD1-202ENST00000563366 TK2O00142 265 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 BAG3O95817 575 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 DDIT3P35638 169 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 TDO2P48775 406 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 MECOMQ03112 1051 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 SOGA3Q5TF21 947 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 IFNL3Q8IZI9 196 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 FBXL16Q8N461 479 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 CRNKL1Q9BZJ0 848 aaKnown RBP11.46□□□□□ -0.57
UBFD1-202ENST00000563366 MTFR1LQ9H019 292 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 RNF41Q9H4P4 317 aaPredicted RBP11.46□□□□□ -0.57
UBFD1-202ENST00000563366 ARMT1Q9H993 441 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 POLLQ9UGP5 575 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 SLC4A4Q9Y6R1 1079 aa11.46□□□□□ -0.57
UBFD1-202ENST00000563366 NAV1Q8NEY1 1877 aa11.46□□□□□ -0.58
UBFD1-202ENST00000563366 PSME4Q14997 1843 aa11.46□□□□□ -0.58
UBFD1-202ENST00000563366 FOCADQ5VW36 1801 aa11.45□□□□□ -0.58
UBFD1-202ENST00000563366 FOXP2O15409 715 aa11.45□□□□□ -0.58
UBFD1-202ENST00000563366 PCP11498 1178 aaKnown RBP11.45□□□□□ -0.58
UBFD1-202ENST00000563366 MCM5P33992 734 aa11.45□□□□□ -0.58
UBFD1-202ENST00000563366 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
UBFD1-202ENST00000563366 LAPTM4BQ86VI4 370 aa11.45□□□□□ -0.58
UBFD1-202ENST00000563366 LCORLQ8N3X6 602 aa11.45□□□□□ -0.58
UBFD1-202ENST00000563366 SPIRE2Q8WWL2 714 aa11.45□□□□□ -0.58
UBFD1-202ENST00000563366 BRCA1P38398 1863 aaKnown RBP11.44□□□□□ -0.58
UBFD1-202ENST00000563366 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 GSG1L2A8MUP6 293 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 PRDX5P30044 214 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 CLK2P49760 499 aaKnown RBP11.44□□□□□ -0.58
UBFD1-202ENST00000563366 TGFB2P61812 414 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 PODNQ7Z5L7 613 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 AMOTL1Q8IY63 956 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 MIGA1Q8NAN2 632 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 RIOK1Q9BRS2 568 aaKnown RBP11.44□□□□□ -0.58
UBFD1-202ENST00000563366 MTA3Q9BTC8 594 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
UBFD1-202ENST00000563366 AGXT2Q9BYV1 514 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 KRT23Q9C075 422 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 ATP8A2Q9NTI2 1148 aa11.44□□□□□ -0.58
UBFD1-202ENST00000563366 BAZ2AQ9UIF9 1905 aaKnown RBP11.44□□□□□ -0.58
UBFD1-202ENST00000563366 MROH7-TTC4A0A0A0MT08 1334 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 SLC3A2P08195 630 aaKnown RBP11.43□□□□□ -0.58
UBFD1-202ENST00000563366 CPA1P15085 419 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 PTMSP20962 102 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 LSM11P83369 360 aaKnown RBP eCLIP11.43□□□□□ -0.58
UBFD1-202ENST00000563366 MFSD14BQ5SR56 506 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 TTLL5Q6EMB2 1281 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 STOX1Q6ZVD7 989 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 NOL8Q76FK4 1167 aaKnown RBP11.43□□□□□ -0.58
UBFD1-202ENST00000563366 RTKN2Q8IZC4 609 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 TTLL6Q8N841 843 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
UBFD1-202ENST00000563366 GBP4Q96PP9 640 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 VPS33BQ9H267 617 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 EPB41L4AQ9HCS5 686 aaPredicted RBP11.43□□□□□ -0.58
UBFD1-202ENST00000563366 ARPP21Q9UBL0 812 aaPredicted RBP11.43□□□□□ -0.58
UBFD1-202ENST00000563366 ANAPC4Q9UJX5 808 aa11.43□□□□□ -0.58
UBFD1-202ENST00000563366 PPP4CP60510 307 aa11.42□□□□□ -0.58
UBFD1-202ENST00000563366 HAND2P61296 217 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms