RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 BCL11AQ9H165 835 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 USP40Q9NVE5 1235 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 PAG1Q9NWQ8 432 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 TMOD2Q9NZR1 351 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 FAM198AQ9UFP1 575 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 PAPPA2Q9BXP8 1791 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 GOLIM4O00461 696 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 MX1P20591 662 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 NUCB1Q02818 461 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 MAP3K12Q12852 859 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 DEFB115Q30KQ5 88 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 SUPT20HL1Q3ZLR7 823 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 VARS2Q5ST30 1063 aaKnown RBP7.52□□□□□ -1.21
CNOT1-204ENST00000563130 TSHZ3Q63HK5 1081 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 C2orf69Q8N8R5 385 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 FAM151AQ8WW52 585 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 DNAJC2Q99543 621 aaKnown RBP7.52□□□□□ -1.21
CNOT1-204ENST00000563130 STAP2Q9UGK3 403 aa7.52□□□□□ -1.21
CNOT1-204ENST00000563130 ABT1Q9ULW3 272 aaKnown RBP7.52□□□□□ -1.21
CNOT1-204ENST00000563130 TCRBV5S4A2TA0A5A2 114 aa7.51□□□□□ -1.21
CNOT1-204ENST00000563130 ENTPD3O75355 529 aa7.51□□□□□ -1.21
CNOT1-204ENST00000563130 NF2P35240 595 aa7.51□□□□□ -1.21
CNOT1-204ENST00000563130 CHD1LQ86WJ1 897 aa7.51□□□□□ -1.21
CNOT1-204ENST00000563130 MAGEB6Q8N7X4 407 aa7.51□□□□□ -1.21
CNOT1-204ENST00000563130 JMYQ8N9B5 988 aa7.51□□□□□ -1.21
CNOT1-204ENST00000563130 GPATCH3Q96I76 525 aa7.51□□□□□ -1.21
CNOT1-204ENST00000563130 HS3ST6Q96QI5 342 aa7.51□□□□□ -1.21
CNOT1-204ENST00000563130 GLRX3O76003 335 aaKnown RBP7.5□□□□□ -1.21
CNOT1-204ENST00000563130 BAG3O95817 575 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 PDE6AP16499 860 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 CYP7A1P22680 504 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 RGS3P49796 1198 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 PDE1AP54750 535 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 HUNKP57058 714 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 LDLRAD1Q5T700 205 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 SLC9C2Q5TAH2 1124 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 B4GALNT3Q6L9W6 998 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 MOB2Q70IA6 237 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 ZFPM1Q8IX07 1006 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 RIOK1Q9BRS2 568 aaKnown RBP7.5□□□□□ -1.21
CNOT1-204ENST00000563130 LNPKQ9C0E8 428 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 DDX4Q9NQI0 724 aaKnown RBP7.5□□□□□ -1.21
CNOT1-204ENST00000563130 AATFQ9NY61 560 aaKnown RBP eCLIP7.5□□□□□ -1.21
CNOT1-204ENST00000563130 MKRN1Q9UHC7 482 aaKnown RBP7.5□□□□□ -1.21
CNOT1-204ENST00000563130 ATRNL1Q5VV63 1379 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 UNCXA6NJT0 531 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 ERC2O15083 957 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 USP2O75604 605 aaPredicted RBP7.5□□□□□ -1.21
CNOT1-204ENST00000563130 ADD2P35612 726 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 VEGFBP49765 207 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 UBE3CQ15386 1083 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 SH3BP5LQ7L8J4 393 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 CERS3Q8IU89 383 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 KBTBD3Q8NAB2 608 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 OSBPL3Q9H4L5 887 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 FZD1Q9UP38 647 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 PCNTO95613 3336 aa7.5□□□□□ -1.21
CNOT1-204ENST00000563130 COL2A1P02458 1487 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 FAM155AB1AL88 458 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 PPP1R12BO60237 982 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 MAP3K10Q02779 954 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 TCP10Q12799 353 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 PPP4R3BQ5MIZ7 849 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 RGMBQ6NW40 437 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 SH3RF3Q8TEJ3 882 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 ZNF532Q9HCE3 1301 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 DDTLA6NHG4 134 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 UBE2Q2LH0YL09 131 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 CHGBP05060 677 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 ECE1P42892 770 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 DYNLL1P63167 89 aaKnown RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 CYP4F22Q6NT55 531 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 ARMC9Q7Z3E5 817 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 PLEKHM2Q8IWE5 1019 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 MIGA1Q8NAN2 632 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 CAPNS2Q96L46 248 aa7.49□□□□□ -1.21
CNOT1-204ENST00000563130 NOL10Q9BSC4 688 aaKnown RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.49□□□□□ -1.212e-7■■■■□ 26.7
CNOT1-204ENST00000563130 OSBPL5Q9H0X9 879 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 ANGEL1Q9UNK9 670 aaKnown RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 WDR33Q9C0J8 1336 aaKnown RBP7.49□□□□□ -1.21
CNOT1-204ENST00000563130 THSD7BQ9C0I4 1608 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 CENPBP07199 599 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-204ENST00000563130 PRKG1Q13976 671 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 SLFNL1Q499Z3 407 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 TEX11Q8IYF3 940 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.48□□□□□ -1.215e-7■■■■□ 21.4
CNOT1-204ENST00000563130 HOOK2Q96ED9 719 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 SLC10A3P09131 477 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 MAP2K2P36507 400 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 IREB2P48200 963 aaKnown RBP7.48□□□□□ -1.21
CNOT1-204ENST00000563130 FOSBP53539 338 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 PICALMQ13492 652 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 TTLL12Q14166 644 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-204ENST00000563130 ZSCAN25Q6NSZ9 544 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-204ENST00000563130 ZNF454Q8N9F8 522 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 CCDC102AQ96A19 550 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 CSRNP1Q96S65 589 aa7.48□□□□□ -1.21
CNOT1-204ENST00000563130 ZNF112Q9UJU3 913 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms