RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 ECM29Q5VYK3 1845 aa24.73■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 SLC39A14Q15043 492 aa24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 STX1AQ16623 288 aa24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 PRR5LQ6MZQ0 368 aa24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 ZNF804AQ7Z570 1209 aa24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 DZIP1Q86YF9 867 aaKnown RBP24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 FMR1NBQ8N0W7 255 aaPredicted RBP24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 ARPP21Q9UBL0 812 aaPredicted RBP24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 ORC4O43929 436 aa24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 NT5C2P49902 561 aa24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 CRACR2BQ8N4Y2 399 aaPredicted RBP24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.72■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 CCDC88AQ3V6T2 1871 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 UBR3Q6ZT12 1888 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 USP17L12C9JPN9 530 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 USP17L21D6R901 530 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 PPP6R2O75170 966 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 CALM1P0DP23 149 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 CALM2P0DP24 149 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 CALM3P0DP25 149 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 GSTO1P78417 241 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 SBK1Q52WX2 424 aa24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 QTRT2Q9H974 415 aaKnown RBP24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 AATFQ9NY61 560 aaKnown RBP eCLIP24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.71■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 KIAA1551Q9HCM1 1747 aa24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 TPM3P06753 285 aa24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 CMA1P23946 247 aa24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 PRDX5P30044 214 aa24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 ZNF165P49910 485 aa24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 PLCB2Q00722 1185 aa24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 CATIPQ7Z7H3 387 aa24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 TXNRD3Q86VQ6 643 aa24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 TDRD7Q8NHU6 1098 aaKnown RBP24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 NUP133Q8WUM0 1156 aa24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 RBM17Q96I25 401 aaKnown RBP24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 DCP1AQ9NPI6 582 aaPredicted RBP24.7■■□□□ 1.55
VPS9D1-AS1-202ENST00000562866 GYS1P13807 737 aa24.7■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 IFIT1BQ5T764 474 aaKnown RBP24.7■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 NBPF11Q86T75 865 aa24.7■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 ENAHQ8N8S7 591 aaPredicted RBP24.7■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 RBM28Q9NW13 759 aaKnown RBP24.7■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 MMP1P03956 469 aa24.69■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 LDHBP07195 334 aaKnown RBP24.69■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 CRY2Q49AN0 593 aa24.69■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 LUZP1Q86V48 1076 aa24.69■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 RNF26Q9BY78 433 aaPredicted RBP24.69■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 ANO10Q9NW15 660 aa24.69■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.69■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 CYP2D7A0A087X1C5 515 aa24.68■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 GOLGA6L6A8MZA4 724 aa24.68■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 AKAP17AQ02040 695 aaKnown RBP24.68■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 SDF4Q9BRK5 362 aa24.68■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 DNAJC25Q9H1X3 360 aa24.68■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 FOXP1Q9H334 677 aaPredicted RBP24.68■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 LAMB1P07942 1786 aa24.68■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 A0A1B0GVL5 298 aa24.67■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 DDAH1O94760 285 aa24.67■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 SERPINB2P05120 415 aa24.67■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 ATP2B4P23634 1241 aa24.67■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 NDUFA8P51970 172 aa24.67■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 PDE4BQ07343 736 aa24.67■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 NOSTRINQ8IVI9 506 aa24.67■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 XBP1P17861 261 aa24.67■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 AXDND1Q5T1B0 1012 aaPredicted RBP24.67■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 BAZ2AQ9UIF9 1905 aaKnown RBP24.66■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 LDHCP07864 332 aa24.66■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 KRT27Q7Z3Y8 459 aa24.66■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 CERS3Q8IU89 383 aa24.66■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 MAP3K14Q99558 947 aa24.66■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 NOL10Q9BSC4 688 aaKnown RBP24.66■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.66■■□□□ 1.541e-8■■■■□ 20.8
VPS9D1-AS1-202ENST00000562866 DLEC1Q9Y238 1755 aa24.66■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 BBOX1O75936 387 aa24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 BAG3O95817 575 aa24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 PTPAQ15257 358 aa24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 NAT10Q9H0A0 1025 aaKnown RBP24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 AP5Z1O43299 807 aa24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 GUCY1A2P33402 732 aa24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 KIAA2012Q0VF49 1180 aa24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 DIS3L2Q8IYB7 885 aaKnown RBP24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 TIGD1Q96MW7 591 aa24.65■■□□□ 1.54
VPS9D1-AS1-202ENST00000562866 GOLGA6L19H0YKK7 550 aa24.64■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 PRDM1O75626 825 aa24.64■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 GPSM2P81274 684 aa24.64■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 ZRSR1Q15695 479 aaKnown RBP24.64■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.64■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 GGA1Q9UJY5 639 aa24.64■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 SMIM22K7EJ46 135 aa24.63■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 PRPF3O43395 683 aaKnown RBP24.63■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 CUTAO60888 179 aa24.63■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 PFKFB1P16118 471 aa24.63■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 RILPL1Q5EBL4 403 aa24.63■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 AMOTL1Q8IY63 956 aa24.63■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 CEP57L1Q8IYX8 460 aa24.63■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 FAM237AA0A1B0GTK4 181 aa24.62■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 OFD1O75665 1012 aa24.62■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 ZNF202O95125 648 aa24.62■■□□□ 1.53
VPS9D1-AS1-202ENST00000562866 HOXA10P31260 410 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms