RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 PICALMQ13492 652 aa16.52■□□□□ 0.24
SPG7-206ENST00000562775 TMEM67Q5HYA8 995 aa16.52■□□□□ 0.24
SPG7-206ENST00000562775 GTF3C6Q969F1 213 aa16.52■□□□□ 0.24
SPG7-206ENST00000562775 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
SPG7-206ENST00000562775 IDI2Q9BXS1 227 aa16.52■□□□□ 0.24
SPG7-206ENST00000562775 DDX4Q9NQI0 724 aaKnown RBP16.52■□□□□ 0.24
SPG7-206ENST00000562775 PCDHAC2Q9Y5I4 1007 aa16.52■□□□□ 0.24
SPG7-206ENST00000562775 FZD9O00144 591 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 RANBP6O60518 1105 aaKnown RBP16.51■□□□□ 0.23
SPG7-206ENST00000562775 PRDM1O75626 825 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 PDIA3P30101 505 aaKnown RBP16.51■□□□□ 0.23
SPG7-206ENST00000562775 MMP14P50281 582 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 SLC4A8Q2Y0W8 1093 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 ARHGAP27Q6ZUM4 889 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 TTC6Q86TZ1 520 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 SGMS1Q86VZ5 419 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 OSBPL5Q9H0X9 879 aaPredicted RBP16.51■□□□□ 0.23
SPG7-206ENST00000562775 ZNF287Q9HBT7 754 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 SMC3Q9UQE7 1217 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 KLF18A0A0U1RQI7 1052 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 ERICH2A1L162 156 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 RPS12P25398 132 aaKnown RBP16.51■□□□□ 0.23
SPG7-206ENST00000562775 EIF6P56537 245 aaKnown RBP16.51■□□□□ 0.23
SPG7-206ENST00000562775 NUCB2P80303 420 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 IQCA1Q86XH1 822 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 DYNLL2Q96FJ2 89 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 PRMT6Q96LA8 375 aaPredicted RBP16.51■□□□□ 0.23
SPG7-206ENST00000562775 UBAC1Q9BSL1 405 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 BRPF3Q9ULD4 1205 aa16.51■□□□□ 0.23
SPG7-206ENST00000562775 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
SPG7-206ENST00000562775 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
SPG7-206ENST00000562775 SCRN1Q12765 414 aa16.5■□□□□ 0.23
SPG7-206ENST00000562775 NFIAQ12857 509 aa16.5■□□□□ 0.23
SPG7-206ENST00000562775 DLGAP5Q15398 846 aa16.5■□□□□ 0.23
SPG7-206ENST00000562775 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
SPG7-206ENST00000562775 MTMR14Q8NCE2 650 aa16.5■□□□□ 0.23
SPG7-206ENST00000562775 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
SPG7-206ENST00000562775 MKNK2Q9HBH9 465 aa16.5■□□□□ 0.23
SPG7-206ENST00000562775 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
SPG7-206ENST00000562775 LMNB1P20700 586 aa16.49■□□□□ 0.23
SPG7-206ENST00000562775 WTAPQ15007 396 aa16.49■□□□□ 0.23
SPG7-206ENST00000562775 ZSCAN10Q96SZ4 725 aaPredicted RBP16.49■□□□□ 0.23
SPG7-206ENST00000562775 ZKSCAN3Q9BRR0 538 aa16.49■□□□□ 0.23
SPG7-206ENST00000562775 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
SPG7-206ENST00000562775 DHX36Q9H2U1 1008 aaKnown RBP16.49■□□□□ 0.23
SPG7-206ENST00000562775 TNKSO95271 1327 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 CDK8P49336 464 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 SEC23AQ15436 765 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 APOA5Q6Q788 366 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 ZNF444Q8N0Y2 327 aaPredicted RBP16.48■□□□□ 0.23
SPG7-206ENST00000562775 SENP2Q9HC62 589 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 TMOD2Q9NZR1 351 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 FAM198AQ9UFP1 575 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
SPG7-206ENST00000562775 TSPY2A6NKD2 308 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 ENTPD3O75355 529 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 GJB2P29033 226 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 CACNB3P54284 484 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 CCT2P78371 535 aaKnown RBP16.47■□□□□ 0.23
SPG7-206ENST00000562775 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 SLC44A5Q8NCS7 719 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 DPF2Q92785 391 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 DICER1Q9UPY3 1922 aaKnown RBP16.47■□□□□ 0.23
SPG7-206ENST00000562775 ZBTB43O43298 467 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 DHX16O60231 1041 aaKnown RBP16.47■□□□□ 0.23
SPG7-206ENST00000562775 RASA1P20936 1047 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 ZNF280AP59817 542 aaPredicted RBP16.47■□□□□ 0.23
SPG7-206ENST00000562775 TFAP4Q01664 338 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 GABPAQ06546 454 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 ZBED3Q96IU2 234 aaPredicted RBP16.47■□□□□ 0.23
SPG7-206ENST00000562775 EHD4Q9H223 541 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
SPG7-206ENST00000562775 RCAN1P53805 252 aa16.46■□□□□ 0.23
SPG7-206ENST00000562775 CCDC178Q5BJE1 867 aa16.46■□□□□ 0.23
SPG7-206ENST00000562775 ZFPM1Q8IX07 1006 aa16.46■□□□□ 0.23
SPG7-206ENST00000562775 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
SPG7-206ENST00000562775 SMARCC2Q8TAQ2 1214 aa16.46■□□□□ 0.23
SPG7-206ENST00000562775 NCOA5Q9HCD5 579 aaKnown RBP16.46■□□□□ 0.23
SPG7-206ENST00000562775 ZNF70Q9UC06 446 aaPredicted RBP16.46■□□□□ 0.23
SPG7-206ENST00000562775 SWAP70Q9UH65 585 aa16.46■□□□□ 0.23
SPG7-206ENST00000562775 SERPINB13Q9UIV8 391 aa16.46■□□□□ 0.23
SPG7-206ENST00000562775 TAOK2Q9UL54 1235 aa16.46■□□□□ 0.23
SPG7-206ENST00000562775 COL2A1P02458 1487 aaPredicted RBP16.45■□□□□ 0.22
SPG7-206ENST00000562775 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
SPG7-206ENST00000562775 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
SPG7-206ENST00000562775 PDIA4P13667 645 aaKnown RBP16.45■□□□□ 0.22
SPG7-206ENST00000562775 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
SPG7-206ENST00000562775 METAP2P50579 478 aaKnown RBP eCLIP16.45■□□□□ 0.22
SPG7-206ENST00000562775 TCP10Q12799 353 aa16.45■□□□□ 0.22
SPG7-206ENST00000562775 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
SPG7-206ENST00000562775 FKBP1CQ5VVH2 108 aa16.45■□□□□ 0.22
SPG7-206ENST00000562775 NSUN7Q8NE18 718 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms