RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ITPK1Q13572 414 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 MAPKAPK5Q8IW41 473 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 RIPOR2Q9Y4F9 1068 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 SYKP43405 635 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 RASGRF1Q13972 1273 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 CHST3Q7LGC8 479 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 PODNQ7Z5L7 613 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 PPFIBP1Q86W92 1011 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 SP8Q8IXZ3 490 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 LINC00116Q8NCU8 138 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 NALCNQ8IZF0 1738 aa8.62□□□□□ -1.03
TCF4-216ENST00000562680 SMARCC2Q8TAQ2 1214 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 SAP30BPQ9UHR5 308 aaKnown RBP8.61□□□□□ -1.03
TCF4-216ENST00000562680 SPDYE3A6NKU9 549 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 TFAP4Q01664 338 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 DHX36Q9H2U1 1008 aaKnown RBP8.61□□□□□ -1.03
TCF4-216ENST00000562680 STK24Q9Y6E0 443 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 WDR19Q8NEZ3 1342 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 NTSR2O95665 410 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 ZNF654Q8IZM8 581 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 PICK1Q9NRD5 415 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 ALX1Q15699 326 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 SLC4A8Q2Y0W8 1093 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 GALNT17Q6IS24 598 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 USP48Q86UV5 1035 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 ZHX3Q9H4I2 956 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 BCS1LQ9Y276 419 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 CAMTA1Q9Y6Y1 1673 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 PPP4R3AQ6IN85 833 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 GJA3Q9Y6H8 435 aa8.61□□□□□ -1.03
TCF4-216ENST00000562680 TNNT1P13805 278 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 SLC10A5Q5PT55 438 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 KRT25Q7Z3Z0 450 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 ZSCAN10Q96SZ4 725 aaPredicted RBP8.6□□□□□ -1.03
TCF4-216ENST00000562680 SEC62Q99442 399 aaKnown RBP8.6□□□□□ -1.03
TCF4-216ENST00000562680 ZMYM6O95789 1325 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 TOPAZ1Q8N9V7 1692 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 CPA1P15085 419 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 TMEM132AQ24JP5 1023 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 NOC3LQ8WTT2 800 aaKnown RBP8.6□□□□□ -1.03
TCF4-216ENST00000562680 DNM1Q05193 864 aaKnown RBP8.6□□□□□ -1.03
TCF4-216ENST00000562680 DALRD3Q5D0E6 543 aaKnown RBP8.6□□□□□ -1.03
TCF4-216ENST00000562680 ATG9AQ7Z3C6 839 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 TOP1P11387 765 aaKnown RBP8.6□□□□□ -1.03
TCF4-216ENST00000562680 MCAMP43121 646 aa8.6□□□□□ -1.03
TCF4-216ENST00000562680 CYP21A2P08686 494 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 INTS5Q6P9B9 1019 aaKnown RBP8.59□□□□□ -1.03
TCF4-216ENST00000562680 WWC3Q9ULE0 1092 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 CNPY2Q9Y2B0 182 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 BRD1O95696 1058 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 PPP1R2P41236 205 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 RCAN1P53805 252 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 NECTIN1Q15223 517 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 FAM114A1Q8IWE2 563 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 PDILTQ8N807 584 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
TCF4-216ENST00000562680 CELF1Q92879 486 aaKnown RBP8.59□□□□□ -1.03
TCF4-216ENST00000562680 OSBP2Q969R2 916 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 PALD1Q9ULE6 856 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 TNKSO95271 1327 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 PRDM1O75626 825 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 YEATS4O95619 227 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 LIFRP42702 1097 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 SPAG1Q07617 926 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 CHURC1Q8WUH1 139 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 ZKSCAN3Q9BRR0 538 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 AS3MTQ9HBK9 375 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 SLC1A4P43007 532 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 RFX5P48382 616 aaPredicted RBP8.59□□□□□ -1.03
TCF4-216ENST00000562680 CBX1P83916 185 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 CUL4AQ13619 759 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 ANTXR1Q9H6X2 564 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 GDPD2Q9HCC8 539 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 PIH1D3Q9NQM4 214 aaKnown RBP8.59□□□□□ -1.03
TCF4-216ENST00000562680 TMOD4Q9NZQ9 345 aa8.59□□□□□ -1.03
TCF4-216ENST00000562680 STRBPQ96SI9 672 aaKnown RBP8.59□□□□□ -1.04
TCF4-216ENST00000562680 MYCBPQ99417 103 aaPredicted RBP8.59□□□□□ -1.04
TCF4-216ENST00000562680 NEMFO60524 1076 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 DOK7Q18PE1 504 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 KRT79Q5XKE5 535 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 PRR5LQ6MZQ0 368 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 LRSAM1Q6UWE0 723 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 DIS3L2Q8IYB7 885 aaKnown RBP8.58□□□□□ -1.04
TCF4-216ENST00000562680 CD209Q9NNX6 404 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 hCG_1984214I3L0E3 225 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 DYNC1I1O14576 645 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 ME3Q16798 604 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 KIAA0825Q8IV33 1275 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 ZNF713Q8N859 430 aaPredicted RBP8.58□□□□□ -1.04
TCF4-216ENST00000562680 FANCBQ8NB91 859 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 USP25Q9UHP3 1055 aa8.58□□□□□ -1.04
TCF4-216ENST00000562680 ZBTB12Q9Y330 459 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms