RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PATL2C9JE40 543 aaKnown RBP7.83□□□□□ -1.16
SMG1-206ENST00000562668 CELA3AP09093 270 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 USP17L7P0C7H9 530 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 ITGB5P18084 799 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 LRRC14Q15048 493 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 PPM1JQ5JR12 505 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 RASIP1Q5U651 963 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 SCARA3Q6AZY7 606 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 TRAIPQ9BWF2 469 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 MKNK2Q9HBH9 465 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 ABCC8Q09428 1581 aa7.83□□□□□ -1.16
SMG1-206ENST00000562668 BIVM-ERCC5R4GMW8 1640 aa7.82□□□□□ -1.16
SMG1-206ENST00000562668 SYNJ1O43426 1573 aa7.82□□□□□ -1.16
SMG1-206ENST00000562668 CEACAM5P06731 702 aa7.82□□□□□ -1.16
SMG1-206ENST00000562668 NTF4P34130 210 aa7.82□□□□□ -1.16
SMG1-206ENST00000562668 PLCL1Q15111 1095 aa7.82□□□□□ -1.16
SMG1-206ENST00000562668 IFI16Q16666 785 aaKnown RBP7.82□□□□□ -1.16
SMG1-206ENST00000562668 PCNX4Q63HM2 1172 aa7.82□□□□□ -1.16
SMG1-206ENST00000562668 ARHGAP27Q6ZUM4 889 aa7.82□□□□□ -1.16
SMG1-206ENST00000562668 PICK1Q9NRD5 415 aa7.82□□□□□ -1.16
SMG1-206ENST00000562668 CSADQ9Y600 493 aa7.82□□□□□ -1.16
SMG1-206ENST00000562668 TARBP1Q13395 1621 aaKnown RBP7.81□□□□□ -1.16
SMG1-206ENST00000562668 DCDC2CA8MYV0 355 aa7.81□□□□□ -1.16
SMG1-206ENST00000562668 LDHBP07195 334 aaKnown RBP7.81□□□□□ -1.16
SMG1-206ENST00000562668 SPRED2Q7Z698 418 aa7.81□□□□□ -1.16
SMG1-206ENST00000562668 TOP2BQ02880 1626 aa7.81□□□□□ -1.16
SMG1-206ENST00000562668 POLA1P09884 1462 aaPredicted RBP7.81□□□□□ -1.16
SMG1-206ENST00000562668 JUNBP17275 347 aaPredicted RBP7.8□□□□□ -1.16
SMG1-206ENST00000562668 OXCT1P55809 520 aa7.8□□□□□ -1.16
SMG1-206ENST00000562668 RING1Q06587 406 aa7.8□□□□□ -1.16
SMG1-206ENST00000562668 ZBTB37Q5TC79 503 aa7.8□□□□□ -1.16
SMG1-206ENST00000562668 UBE3DQ7Z6J8 389 aa7.8□□□□□ -1.16
SMG1-206ENST00000562668 FRMD6Q96NE9 622 aa7.8□□□□□ -1.16
SMG1-206ENST00000562668 PCDHA4Q9UN74 947 aa7.8□□□□□ -1.16
SMG1-206ENST00000562668 CYP8B1Q9UNU6 501 aa7.8□□□□□ -1.16
SMG1-206ENST00000562668 TTF2Q9UNY4 1162 aaKnown RBP7.8□□□□□ -1.16
SMG1-206ENST00000562668 WDR97A6NE52 1622 aa7.79□□□□□ -1.16
SMG1-206ENST00000562668 FANCGO15287 622 aa7.79□□□□□ -1.16
SMG1-206ENST00000562668 PRKCQQ04759 706 aa7.79□□□□□ -1.16
SMG1-206ENST00000562668 BNIP3Q12983 259 aa7.79□□□□□ -1.16
SMG1-206ENST00000562668 ZNF792Q3KQV3 632 aa7.79□□□□□ -1.16
SMG1-206ENST00000562668 C12orf40Q86WS4 652 aa7.79□□□□□ -1.16
SMG1-206ENST00000562668 ELMO3Q96BJ8 720 aa7.79□□□□□ -1.16
SMG1-206ENST00000562668 VAV3Q9UKW4 847 aa7.79□□□□□ -1.16
SMG1-206ENST00000562668 WRNQ14191 1432 aaPredicted RBP eCLIP7.78□□□□□ -1.16
SMG1-206ENST00000562668 CD8BP10966 210 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 ITIH2P19823 946 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 FUT4P22083 530 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 GNA15P30679 374 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 SV2BQ7L1I2 683 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 GAL3ST3Q96A11 431 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 ASIC4Q96FT7 647 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 HRASLS5Q96KN8 279 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 PRDM10Q9NQV6 1147 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 FGD5Q6ZNL6 1462 aa7.78□□□□□ -1.16
SMG1-206ENST00000562668 IFT140Q96RY7 1462 aa7.77□□□□□ -1.17
SMG1-206ENST00000562668 TMEM265A0A087WTH1 108 aa7.77□□□□□ -1.17
SMG1-206ENST00000562668 PRPF40AO75400 957 aaKnown RBP7.77□□□□□ -1.17
SMG1-206ENST00000562668 KCT2Q8NC54 265 aa7.77□□□□□ -1.17
SMG1-206ENST00000562668 HEXIM2Q96MH2 286 aaKnown RBP7.77□□□□□ -1.17
SMG1-206ENST00000562668 TNKS2Q9H2K2 1166 aa7.77□□□□□ -1.17
SMG1-206ENST00000562668 GTF2IRD1Q9UHL9 959 aa7.77□□□□□ -1.17
SMG1-206ENST00000562668 PLAGL2Q9UPG8 496 aa7.77□□□□□ -1.17
SMG1-206ENST00000562668 RAD54L2Q9Y4B4 1467 aa7.76□□□□□ -1.17
SMG1-206ENST00000562668 PAPLNO95428 1278 aa7.76□□□□□ -1.17
SMG1-206ENST00000562668 EIF4BP23588 611 aaKnown RBP7.76□□□□□ -1.17
SMG1-206ENST00000562668 CD96P40200 585 aa7.76□□□□□ -1.17
SMG1-206ENST00000562668 AOC3Q16853 763 aa7.76□□□□□ -1.17
SMG1-206ENST00000562668 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
SMG1-206ENST00000562668 CDC37L1Q7L3B6 337 aa7.76□□□□□ -1.17
SMG1-206ENST00000562668 ARMCX6Q7L4S7 300 aa7.76□□□□□ -1.17
SMG1-206ENST00000562668 ZNF608Q9ULD9 1512 aaPredicted RBP7.76□□□□□ -1.17
SMG1-206ENST00000562668 PRAMEF27A3QJZ7 478 aa7.75□□□□□ -1.17
SMG1-206ENST00000562668 IGF2BP3O00425 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMG1-206ENST00000562668 YBX3P16989 372 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMG1-206ENST00000562668 ANGEL2Q5VTE6 544 aaKnown RBP7.75□□□□□ -1.17
SMG1-206ENST00000562668 FAM214BQ7L5A3 538 aa7.75□□□□□ -1.17
SMG1-206ENST00000562668 FGD1P98174 961 aa7.74□□□□□ -1.17
SMG1-206ENST00000562668 PTPN11Q06124 597 aaPredicted RBP7.74□□□□□ -1.17
SMG1-206ENST00000562668 INPP5AQ14642 412 aa7.74□□□□□ -1.17
SMG1-206ENST00000562668 TTBK2Q6IQ55 1244 aa7.74□□□□□ -1.17
SMG1-206ENST00000562668 SND1Q7KZF4 910 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMG1-206ENST00000562668 HDXQ7Z353 690 aa7.74□□□□□ -1.17
SMG1-206ENST00000562668 ZNF507Q8TCN5 953 aa7.74□□□□□ -1.17
SMG1-206ENST00000562668 PLPPR2Q96GM1 343 aa7.74□□□□□ -1.17
SMG1-206ENST00000562668 RC3H2Q9HBD1 1191 aaKnown RBP7.74□□□□□ -1.17
SMG1-206ENST00000562668 ADAMTS6Q9UKP5 1117 aa7.74□□□□□ -1.17
SMG1-206ENST00000562668 SNX11Q9Y5W9 270 aa7.74□□□□□ -1.17
SMG1-206ENST00000562668 EIF4G3O43432 1585 aaKnown RBP7.74□□□□□ -1.17
SMG1-206ENST00000562668 SOGA1O94964 1423 aa7.73□□□□□ -1.17
SMG1-206ENST00000562668 BIN1O00499 593 aa7.73□□□□□ -1.17
SMG1-206ENST00000562668 LRIG2O94898 1065 aa7.73□□□□□ -1.17
SMG1-206ENST00000562668 RNASE1P07998 156 aaKnown RBP7.73□□□□□ -1.17
SMG1-206ENST00000562668 WIPI1Q5MNZ9 446 aaPredicted RBP7.73□□□□□ -1.17
SMG1-206ENST00000562668 OGFOD2Q6N063 350 aa7.73□□□□□ -1.17
SMG1-206ENST00000562668 CYFIP1Q7L576 1253 aa7.73□□□□□ -1.17
SMG1-206ENST00000562668 SPACA3Q8IXA5 215 aa7.73□□□□□ -1.17
SMG1-206ENST00000562668 MBNL3Q9NUK0 354 aaKnown RBP7.73□□□□□ -1.17
SMG1-206ENST00000562668 MAPK8IP1Q9UQF2 711 aa7.73□□□□□ -1.17
SMG1-206ENST00000562668 ABCA10Q8WWZ4 1543 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms