RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 PI16Q6UXB8 463 aa6.34□□□□□ -1.39
DENND4A-205ENST00000562540 SYDE1Q6ZW31 735 aaPredicted RBP6.34□□□□□ -1.39
DENND4A-205ENST00000562540 GPBAR1Q8TDU6 330 aa6.34□□□□□ -1.39
DENND4A-205ENST00000562540 ALKBH8Q96BT7 664 aaKnown RBP6.34□□□□□ -1.39
DENND4A-205ENST00000562540 EMILIN2Q9BXX0 1053 aa6.34□□□□□ -1.39
DENND4A-205ENST00000562540 CBX8Q9HC52 389 aa6.34□□□□□ -1.39
DENND4A-205ENST00000562540 PICK1Q9NRD5 415 aa6.34□□□□□ -1.39
DENND4A-205ENST00000562540 RAPGEFL1Q9UHV5 662 aa6.34□□□□□ -1.39
DENND4A-205ENST00000562540 AKAP2Q9Y2D5 859 aa6.34□□□□□ -1.39
DENND4A-205ENST00000562540 IGF2BP3O00425 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
DENND4A-205ENST00000562540 NME2P22392 152 aa6.33□□□□□ -1.4
DENND4A-205ENST00000562540 SPACA3Q8IXA5 215 aa6.33□□□□□ -1.4
DENND4A-205ENST00000562540 BCO2Q9BYV7 579 aa6.33□□□□□ -1.4
DENND4A-205ENST00000562540 PRDM10Q9NQV6 1147 aa6.33□□□□□ -1.4
DENND4A-205ENST00000562540 GNAT3A8MTJ3 354 aa6.32□□□□□ -1.4
DENND4A-205ENST00000562540 INHBBP09529 407 aa6.32□□□□□ -1.4
DENND4A-205ENST00000562540 C1QTNF9P0C862 333 aa6.32□□□□□ -1.4
DENND4A-205ENST00000562540 PPM1JQ5JR12 505 aa6.32□□□□□ -1.4
DENND4A-205ENST00000562540 RBCK1Q9BYM8 510 aa6.32□□□□□ -1.4
DENND4A-205ENST00000562540 GTF3C3Q9Y5Q9 886 aa6.32□□□□□ -1.4
DENND4A-205ENST00000562540 CSADQ9Y600 493 aa6.32□□□□□ -1.4
DENND4A-205ENST00000562540 CLCN7P51798 805 aa6.31□□□□□ -1.4
DENND4A-205ENST00000562540 ZNF252P-AS1Q0IIN9 211 aa6.31□□□□□ -1.4
DENND4A-205ENST00000562540 FYB2Q5VWT5 728 aa6.31□□□□□ -1.4
DENND4A-205ENST00000562540 PRR23BQ6ZRT6 265 aa6.31□□□□□ -1.4
DENND4A-205ENST00000562540 FAM214BQ7L5A3 538 aa6.31□□□□□ -1.4
DENND4A-205ENST00000562540 CTNND2Q9UQB3 1225 aa6.31□□□□□ -1.4
DENND4A-205ENST00000562540 PITPNM2Q9BZ72 1349 aa6.3□□□□□ -1.4
DENND4A-205ENST00000562540 AFMP43652 599 aa6.3□□□□□ -1.4
DENND4A-205ENST00000562540 NKPD1Q17RQ9 610 aa6.3□□□□□ -1.4
DENND4A-205ENST00000562540 UBE3DQ7Z6J8 389 aa6.3□□□□□ -1.4
DENND4A-205ENST00000562540 TXNDC2Q86VQ3 553 aa6.3□□□□□ -1.4
DENND4A-205ENST00000562540 DCDC2CA8MYV0 355 aa6.29□□□□□ -1.4
DENND4A-205ENST00000562540 NTF4P34130 210 aa6.29□□□□□ -1.4
DENND4A-205ENST00000562540 NXPE4Q6UWF7 544 aa6.29□□□□□ -1.4
DENND4A-205ENST00000562540 MPRIPQ6WCQ1 1025 aa6.29□□□□□ -1.4
DENND4A-205ENST00000562540 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
DENND4A-205ENST00000562540 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
DENND4A-205ENST00000562540 PRDM5Q9NQX1 630 aaPredicted RBP6.29□□□□□ -1.4
DENND4A-205ENST00000562540 CACNA2D2Q9NY47 1150 aa6.29□□□□□ -1.4
DENND4A-205ENST00000562540 SAMM50Q9Y512 469 aa6.29□□□□□ -1.4
DENND4A-205ENST00000562540 FANCGO15287 622 aa6.28□□□□□ -1.4
DENND4A-205ENST00000562540 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.28□□□□□ -1.4
DENND4A-205ENST00000562540 MPZL3Q6UWV2 235 aa6.28□□□□□ -1.4
DENND4A-205ENST00000562540 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
DENND4A-205ENST00000562540 TMC7Q7Z402 723 aa6.28□□□□□ -1.4
DENND4A-205ENST00000562540 AMIGO3Q86WK7 504 aa6.28□□□□□ -1.4
DENND4A-205ENST00000562540 C12orf40Q86WS4 652 aa6.28□□□□□ -1.4
DENND4A-205ENST00000562540 NECAB3Q96P71 396 aaPredicted RBP6.28□□□□□ -1.4
DENND4A-205ENST00000562540 PNMA6FA0A0J9YX94 578 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 TRIM37O94972 964 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 GLI1P08151 1106 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 CTSWP56202 376 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 ZBTB37Q5TC79 503 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 ARMCX6Q7L4S7 300 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 CYFIP1Q7L576 1253 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 KCT2Q8NC54 265 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 GRIN3AQ8TCU5 1115 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 KIRREL1Q96J84 757 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 CARS2Q9HA77 564 aaKnown RBP6.27□□□□□ -1.41
DENND4A-205ENST00000562540 MAPK8IP1Q9UQF2 711 aa6.27□□□□□ -1.41
DENND4A-205ENST00000562540 FAM155AB1AL88 458 aaPredicted RBP6.26□□□□□ -1.41
DENND4A-205ENST00000562540 NPIPB6E9PJ23 425 aa6.26□□□□□ -1.41
DENND4A-205ENST00000562540 EOMESO95936 686 aa6.26□□□□□ -1.41
DENND4A-205ENST00000562540 LLGL2Q6P1M3 1020 aa6.26□□□□□ -1.41
DENND4A-205ENST00000562540 C3orf58Q8NDZ4 430 aa6.26□□□□□ -1.41
DENND4A-205ENST00000562540 ELMO3Q96BJ8 720 aa6.26□□□□□ -1.41
DENND4A-205ENST00000562540 C20orf173Q96LM9 149 aa6.26□□□□□ -1.41
DENND4A-205ENST00000562540 CEP44Q9C0F1 390 aa6.26□□□□□ -1.41
DENND4A-205ENST00000562540 PCDHA4Q9UN74 947 aa6.26□□□□□ -1.41
DENND4A-205ENST00000562540 NFIBO00712 420 aa6.25□□□□□ -1.41
DENND4A-205ENST00000562540 ENC1O14682 589 aa6.25□□□□□ -1.41
DENND4A-205ENST00000562540 PAGE1O75459 146 aa6.25□□□□□ -1.41
DENND4A-205ENST00000562540 BMP6P22004 513 aa6.25□□□□□ -1.41
DENND4A-205ENST00000562540 GSTT1P30711 240 aa6.25□□□□□ -1.41
DENND4A-205ENST00000562540 RING1Q06587 406 aa6.25□□□□□ -1.41
DENND4A-205ENST00000562540 TMEM67Q5HYA8 995 aa6.25□□□□□ -1.41
DENND4A-205ENST00000562540 TPX2Q9ULW0 747 aaKnown RBP6.25□□□□□ -1.41
DENND4A-205ENST00000562540 FBXO24O75426 580 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 LRIG2O94898 1065 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 LRRC14Q15048 493 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 ENOX2Q16206 610 aaKnown RBP6.24□□□□□ -1.41
DENND4A-205ENST00000562540 MFSD4AQ8N468 514 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 ZNF507Q8TCN5 953 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 HSPA12BQ96MM6 686 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 KRTAP9-8Q9BYQ0 159 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 ATP13A1Q9HD20 1204 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 BIN2Q9UBW5 565 aaPredicted RBP6.24□□□□□ -1.41
DENND4A-205ENST00000562540 DCTN4Q9UJW0 460 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 PPM1HQ9ULR3 514 aa6.24□□□□□ -1.41
DENND4A-205ENST00000562540 SOWAHDA6NJG2 315 aa6.23□□□□□ -1.41
DENND4A-205ENST00000562540 PRR33A8MZF0 331 aa6.23□□□□□ -1.41
DENND4A-205ENST00000562540 SLITRK5O94991 958 aa6.23□□□□□ -1.41
DENND4A-205ENST00000562540 HOXA5P20719 270 aa6.23□□□□□ -1.41
DENND4A-205ENST00000562540 CDKAL1Q5VV42 579 aa6.23□□□□□ -1.41
DENND4A-205ENST00000562540 NPAS4Q8IUM7 802 aa6.23□□□□□ -1.41
DENND4A-205ENST00000562540 KCNK12Q9HB15 430 aa6.23□□□□□ -1.41
DENND4A-205ENST00000562540 SEMA3GQ9NS98 782 aa6.23□□□□□ -1.41
DENND4A-205ENST00000562540 PRAMEF27A3QJZ7 478 aa6.22□□□□□ -1.41
DENND4A-205ENST00000562540 H3BS24 57 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms