RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ZSWIM5Q9P217 1185 aa16.79■□□□□ 0.28
COMMD4-205ENST00000562310 TACC3Q9Y6A5 838 aa16.79■□□□□ 0.28
COMMD4-205ENST00000562310 IFIT3O14879 490 aaKnown RBP16.78■□□□□ 0.28
COMMD4-205ENST00000562310 RCAN1P53805 252 aa16.78■□□□□ 0.28
COMMD4-205ENST00000562310 TTC6Q86TZ1 520 aa16.78■□□□□ 0.28
COMMD4-205ENST00000562310 IQCA1Q86XH1 822 aa16.78■□□□□ 0.28
COMMD4-205ENST00000562310 IDI2Q9BXS1 227 aa16.78■□□□□ 0.28
COMMD4-205ENST00000562310 KLF18A0A0U1RQI7 1052 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 GOLGA8BA8MQT2 603 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 DHX16O60231 1041 aaKnown RBP16.77■□□□□ 0.28
COMMD4-205ENST00000562310 PDIA3P30101 505 aaKnown RBP16.77■□□□□ 0.28
COMMD4-205ENST00000562310 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.28
COMMD4-205ENST00000562310 RASSF7Q02833 373 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 CXCL9Q07325 125 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 ST3GAL1Q11201 340 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 WTAPQ15007 396 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 CFAP100Q494V2 611 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 CCDC178Q5BJE1 867 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 C16orf86Q6ZW13 317 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 NECAB1Q8N987 351 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 OSBPL5Q9H0X9 879 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-205ENST00000562310 LY9Q9HBG7 655 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 TMOD2Q9NZR1 351 aa16.77■□□□□ 0.28
COMMD4-205ENST00000562310 SAP30BPQ9UHR5 308 aaKnown RBP16.77■□□□□ 0.28
COMMD4-205ENST00000562310 SBF1O95248 1867 aa16.77■□□□□ 0.27
COMMD4-205ENST00000562310 NID2Q14112 1375 aa16.77■□□□□ 0.27
COMMD4-205ENST00000562310 RANBP6O60518 1105 aaKnown RBP16.76■□□□□ 0.27
COMMD4-205ENST00000562310 HLA-DOAP06340 250 aa16.76■□□□□ 0.27
COMMD4-205ENST00000562310 STK3Q13188 491 aa16.76■□□□□ 0.27
COMMD4-205ENST00000562310 RAB3GAP1Q15042 981 aa16.76■□□□□ 0.27
COMMD4-205ENST00000562310 NFXL1Q6ZNB6 911 aa16.76■□□□□ 0.27
COMMD4-205ENST00000562310 MTMR14Q8NCE2 650 aa16.76■□□□□ 0.27
COMMD4-205ENST00000562310 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
COMMD4-205ENST00000562310 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-205ENST00000562310 KIF3AQ9Y496 699 aa16.76■□□□□ 0.27
COMMD4-205ENST00000562310 CCDC69A6NI79 296 aa16.75■□□□□ 0.27
COMMD4-205ENST00000562310 PDCP20941 246 aa16.75■□□□□ 0.27
COMMD4-205ENST00000562310 HMGN5P82970 282 aaKnown RBP16.75■□□□□ 0.27
COMMD4-205ENST00000562310 PICALMQ13492 652 aa16.75■□□□□ 0.27
COMMD4-205ENST00000562310 DLGAP5Q15398 846 aa16.75■□□□□ 0.27
COMMD4-205ENST00000562310 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
COMMD4-205ENST00000562310 STK11IPQ8N1F8 1099 aa16.75■□□□□ 0.27
COMMD4-205ENST00000562310 ZSCAN10Q96SZ4 725 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-205ENST00000562310 EHD4Q9H223 541 aa16.75■□□□□ 0.27
COMMD4-205ENST00000562310 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
COMMD4-205ENST00000562310 MKNK2Q9HBH9 465 aa16.75■□□□□ 0.27
COMMD4-205ENST00000562310 GPHNQ9NQX3 736 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-205ENST00000562310 SWAP70Q9UH65 585 aa16.75■□□□□ 0.27
COMMD4-205ENST00000562310 TNKSO95271 1327 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 SPDYE2BA6NHP3 402 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 TSPY2A6NKD2 308 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 FZD9O00144 591 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 ENTPD3O75355 529 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 PRDM1O75626 825 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 SPDYE6P0CI01 402 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 LMNB1P20700 586 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 GJB2P29033 226 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 SCRN1Q12765 414 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 SEC23AQ15436 765 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 APOA5Q6Q788 366 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 SYT17Q9BSW7 474 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 DDX4Q9NQI0 724 aaKnown RBP16.74■□□□□ 0.27
COMMD4-205ENST00000562310 BRPF3Q9ULD4 1205 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 SIPA1L1O43166 1804 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 ATRNL1Q5VV63 1379 aa16.74■□□□□ 0.27
COMMD4-205ENST00000562310 WDR33Q9C0J8 1336 aaKnown RBP16.73■□□□□ 0.27
COMMD4-205ENST00000562310 SMIM22K7EJ46 135 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 ZBTB43O43298 467 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 CDKL5O76039 1030 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 PLCD1P51178 756 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 FKBP1CQ5VVH2 108 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 CPLX2Q6PUV4 134 aaKnown RBP16.73■□□□□ 0.27
COMMD4-205ENST00000562310 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 ZNF444Q8N0Y2 327 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-205ENST00000562310 NKX2-3Q8TAU0 364 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 DYNLL2Q96FJ2 89 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 TCP11L1Q9NUJ3 509 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
COMMD4-205ENST00000562310 CDK8P49336 464 aa16.72■□□□□ 0.27
COMMD4-205ENST00000562310 METAP2P50579 478 aaKnown RBP eCLIP16.72■□□□□ 0.27
COMMD4-205ENST00000562310 EVX2Q03828 476 aa16.72■□□□□ 0.27
COMMD4-205ENST00000562310 GABPAQ06546 454 aa16.72■□□□□ 0.27
COMMD4-205ENST00000562310 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
COMMD4-205ENST00000562310 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
COMMD4-205ENST00000562310 IFIT1BQ5T764 474 aaKnown RBP16.72■□□□□ 0.27
COMMD4-205ENST00000562310 ENAHQ8N8S7 591 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-205ENST00000562310 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
COMMD4-205ENST00000562310 DPF2Q92785 391 aa16.72■□□□□ 0.27
COMMD4-205ENST00000562310 SERPINB13Q9UIV8 391 aa16.72■□□□□ 0.27
COMMD4-205ENST00000562310 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
COMMD4-205ENST00000562310 ZBTB12Q9Y330 459 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-205ENST00000562310 GREB1LQ9C091 1923 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-205ENST00000562310 GOLGA8AA7E2F4 631 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 CPLX1O14810 134 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 MYO1BO43795 1136 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 DDAH1O94760 285 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
COMMD4-205ENST00000562310 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms