RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 STIM2Q9P246 746 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.79□□□□□ -1.64
SPG11-225ENST00000561391 KIF1AQ12756 1690 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 TNRC18O15417 2968 aaPredicted RBP4.79□□□□□ -1.64
SPG11-225ENST00000561391 PRAG1Q86YV5 1406 aa4.79□□□□□ -1.64
SPG11-225ENST00000561391 GPRASP1Q5JY77 1395 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 ANKRD30AQ9BXX3 1397 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 TULP4Q9NRJ4 1543 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 PEAK1Q9H792 1746 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 TOPAZ1Q8N9V7 1692 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 ATP7BP35670 1465 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 EXOC5O00471 708 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 ICMTO60725 284 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 MPSTP25325 297 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 BRD2P25440 801 aaKnown RBP4.78□□□□□ -1.64
SPG11-225ENST00000561391 GP2P55259 537 aaKnown RBP4.78□□□□□ -1.64
SPG11-225ENST00000561391 SAFB2Q14151 953 aaKnown RBP eCLIP4.78□□□□□ -1.64
SPG11-225ENST00000561391 PCSK7Q16549 785 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 TMEM132EQ6IEE7 984 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 ELMSAN1Q6PJG2 1045 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 TOM1L2Q6ZVM7 507 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 BTLAQ7Z6A9 289 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 SLC51AQ86UW1 340 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 C7orf43Q8WVR3 580 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 AKTIPQ9H8T0 292 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 BCS1LQ9Y276 419 aa4.78□□□□□ -1.64
SPG11-225ENST00000561391 PHRF1Q9P1Y6 1649 aaKnown RBP4.78□□□□□ -1.64
SPG11-225ENST00000561391 NRXN1Q9ULB1 1477 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 TNFRSF10BO14763 440 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 ZBTB39O15060 712 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 FAM13AO94988 1023 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 NOM1Q5C9Z4 860 aaKnown RBP4.77□□□□□ -1.65
SPG11-225ENST00000561391 FAM26DQ5JW98 314 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 TMCO4Q5TGY1 634 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 SMIM5Q71RC9 77 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 ATCAYQ86WG3 371 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 TREML1Q86YW5 311 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 ETFBKMTQ8IXQ9 262 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 NGDNQ8NEJ9 315 aaKnown RBP4.77□□□□□ -1.65
SPG11-225ENST00000561391 MYO19Q96H55 970 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 EGFL7Q9UHF1 273 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 OAS3Q9Y6K5 1087 aaKnown RBP4.77□□□□□ -1.65
SPG11-225ENST00000561391 KCPQ6ZWJ8 1503 aa4.77□□□□□ -1.65
SPG11-225ENST00000561391 GSC2O15499 205 aa4.76□□□□□ -1.65
SPG11-225ENST00000561391 MICAL2O94851 1124 aa4.76□□□□□ -1.65
SPG11-225ENST00000561391 EIF1AXP47813 144 aaKnown RBP4.76□□□□□ -1.65
SPG11-225ENST00000561391 SOX10P56693 466 aa4.76□□□□□ -1.65
SPG11-225ENST00000561391 DNM1Q05193 864 aaKnown RBP4.76□□□□□ -1.65
SPG11-225ENST00000561391 CCINQ13939 588 aa4.76□□□□□ -1.65
SPG11-225ENST00000561391 SND1Q7KZF4 910 aaKnown RBP eCLIP4.76□□□□□ -1.65
SPG11-225ENST00000561391 SLC17A8Q8NDX2 589 aa4.76□□□□□ -1.65
SPG11-225ENST00000561391 FMN2Q9NZ56 1722 aa4.76□□□□□ -1.65
SPG11-225ENST00000561391 PARP4Q9UKK3 1724 aaKnown RBP4.76□□□□□ -1.65
SPG11-225ENST00000561391 A0A0G2JLW4 131 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 TGFBR3LH3BV60 316 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 TGFB1P01137 390 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 VEGFAP15692 232 aaPredicted RBP4.75□□□□□ -1.65
SPG11-225ENST00000561391 EPB42P16452 691 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 ZAP70P43403 619 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 HABP4Q5JVS0 413 aaKnown RBP4.75□□□□□ -1.65
SPG11-225ENST00000561391 PERM1Q5SV97 790 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 DZIP1LQ8IYY4 767 aaKnown RBP4.75□□□□□ -1.65
SPG11-225ENST00000561391 RGL4Q8IZJ4 473 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 ABTB2Q8N961 1025 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 TMC1Q8TDI8 760 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 LPIN3Q9BQK8 851 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 GSX2Q9BZM3 304 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 MCOLN1Q9GZU1 580 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 FRRS1LQ9P0K9 344 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 RNF181Q9P0P0 153 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 USP20Q9Y2K6 914 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 E9PCH4 1651 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 IQGAP3Q86VI3 1631 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 COL24A1Q17RW2 1714 aa4.75□□□□□ -1.65
SPG11-225ENST00000561391 KAT6BQ8WYB5 2073 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 PDE4DIPQ5VU43 2346 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 USP6P35125 1406 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 DAPK1P53355 1430 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 CRB1P82279 1406 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 ALX3O95076 343 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 IGLV1-40P01703 118 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 GLB1P16278 677 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 MAPK1P28482 360 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 GRIK1P39086 918 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 IDH3AP50213 366 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 CCDC27Q2M243 656 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 ALKBH2Q6NS38 261 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 KRT25Q7Z3Z0 450 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 CMTR1Q8N1G2 835 aaKnown RBP4.74□□□□□ -1.65
SPG11-225ENST00000561391 GPR152Q8TDT2 470 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 MRPL18Q9H0U6 180 aaKnown RBP4.74□□□□□ -1.65
SPG11-225ENST00000561391 CCDC87Q9NVE4 849 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 BRPF3Q9ULD4 1205 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 PAPPAQ13219 1627 aa4.74□□□□□ -1.65
SPG11-225ENST00000561391 BCL9O00512 1426 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 ANKRD50Q9ULJ7 1429 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 KIAA1324LA8MWY0 1029 aaPredicted RBP4.73□□□□□ -1.65
SPG11-225ENST00000561391 OPLAHO14841 1288 aa4.73□□□□□ -1.65
SPG11-225ENST00000561391 DEAF1O75398 565 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms