RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 U3KQE9 123 aa8.97□□□□□ -0.97
HMBOX1-216ENST00000561377 BIN1O00499 593 aa8.96□□□□□ -0.98
HMBOX1-216ENST00000561377 YBX3P16989 372 aaKnown RBP eCLIP8.96□□□□□ -0.98
HMBOX1-216ENST00000561377 FUT4P22083 530 aa8.96□□□□□ -0.98
HMBOX1-216ENST00000561377 AOC3Q16853 763 aa8.96□□□□□ -0.98
HMBOX1-216ENST00000561377 RASIP1Q5U651 963 aa8.96□□□□□ -0.98
HMBOX1-216ENST00000561377 SNX11Q9Y5W9 270 aa8.96□□□□□ -0.98
HMBOX1-216ENST00000561377 IGF2BP3O00425 579 aaKnown RBP eCLIP8.95□□□□□ -0.98
HMBOX1-216ENST00000561377 PRPF40AO75400 957 aaKnown RBP8.95□□□□□ -0.98
HMBOX1-216ENST00000561377 ITIH2P19823 946 aa8.95□□□□□ -0.98
HMBOX1-216ENST00000561377 ZNF507Q8TCN5 953 aa8.95□□□□□ -0.98
HMBOX1-216ENST00000561377 PLAGL2Q9UPG8 496 aa8.95□□□□□ -0.98
HMBOX1-216ENST00000561377 HDXQ7Z353 690 aa8.94□□□□□ -0.98
HMBOX1-216ENST00000561377 UBE3DQ7Z6J8 389 aa8.94□□□□□ -0.98
HMBOX1-216ENST00000561377 HEXIM2Q96MH2 286 aaKnown RBP8.94□□□□□ -0.98
HMBOX1-216ENST00000561377 TNKS2Q9H2K2 1166 aa8.94□□□□□ -0.98
HMBOX1-216ENST00000561377 PRAMEF27A3QJZ7 478 aa8.93□□□□□ -0.98
HMBOX1-216ENST00000561377 LRIG2O94898 1065 aa8.93□□□□□ -0.98
HMBOX1-216ENST00000561377 ANGEL2Q5VTE6 544 aaKnown RBP8.93□□□□□ -0.98
HMBOX1-216ENST00000561377 LRFN4Q6PJG9 635 aa8.93□□□□□ -0.98
HMBOX1-216ENST00000561377 FAM214BQ7L5A3 538 aa8.93□□□□□ -0.98
HMBOX1-216ENST00000561377 PI4K2BQ8TCG2 481 aa8.93□□□□□ -0.98
HMBOX1-216ENST00000561377 RC3H2Q9HBD1 1191 aaKnown RBP8.93□□□□□ -0.98
HMBOX1-216ENST00000561377 GNAT3A8MTJ3 354 aa8.92□□□□□ -0.98
HMBOX1-216ENST00000561377 PAPLNO95428 1278 aa8.92□□□□□ -0.98
HMBOX1-216ENST00000561377 LMNB1P20700 586 aa8.92□□□□□ -0.98
HMBOX1-216ENST00000561377 INPP5AQ14642 412 aa8.92□□□□□ -0.98
HMBOX1-216ENST00000561377 TTBK2Q6IQ55 1244 aa8.92□□□□□ -0.98
HMBOX1-216ENST00000561377 ARMCX6Q7L4S7 300 aa8.92□□□□□ -0.98
HMBOX1-216ENST00000561377 SNCAIPQ9Y6H5 919 aa8.92□□□□□ -0.98
HMBOX1-216ENST00000561377 AK5Q9Y6K8 562 aa8.92□□□□□ -0.98
HMBOX1-216ENST00000561377 CD96P40200 585 aa8.91□□□□□ -0.98
HMBOX1-216ENST00000561377 OGFOD2Q6N063 350 aa8.91□□□□□ -0.98
HMBOX1-216ENST00000561377 CYFIP1Q7L576 1253 aa8.91□□□□□ -0.98
HMBOX1-216ENST00000561377 ASB11Q8WXH4 323 aa8.91□□□□□ -0.98
HMBOX1-216ENST00000561377 GAL3ST3Q96A11 431 aa8.91□□□□□ -0.98
HMBOX1-216ENST00000561377 PLPPR2Q96GM1 343 aa8.91□□□□□ -0.98
HMBOX1-216ENST00000561377 EOMESO95936 686 aa8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 RNASE1P07998 156 aaKnown RBP8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 RPS26P62854 115 aaKnown RBP8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 PTPN11Q06124 597 aaPredicted RBP8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 CCDC85BQ15834 202 aaPredicted RBP8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 EAPPQ56P03 285 aaPredicted RBP8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 SND1Q7KZF4 910 aaKnown RBP eCLIP8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 ATG4DQ86TL0 474 aaPredicted RBP8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 WNT10AQ9GZT5 417 aa8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 PRDM5Q9NQX1 630 aaPredicted RBP8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 MAPK8IP1Q9UQF2 711 aa8.9□□□□□ -0.98
HMBOX1-216ENST00000561377 ANKRD33BA6NCL7 494 aa8.89□□□□□ -0.99
HMBOX1-216ENST00000561377 BTBD11A6QL63 1104 aa8.89□□□□□ -0.99
HMBOX1-216ENST00000561377 WIPI1Q5MNZ9 446 aaPredicted RBP8.89□□□□□ -0.99
HMBOX1-216ENST00000561377 SPACA3Q8IXA5 215 aa8.89□□□□□ -0.99
HMBOX1-216ENST00000561377 DUSP9Q99956 384 aaKnown RBP8.89□□□□□ -0.99
HMBOX1-216ENST00000561377 FOXQ1Q9C009 403 aa8.89□□□□□ -0.99
HMBOX1-216ENST00000561377 MBNL3Q9NUK0 354 aaKnown RBP8.89□□□□□ -0.99
HMBOX1-216ENST00000561377 CLCN7P51798 805 aa8.88□□□□□ -0.99
HMBOX1-216ENST00000561377 ETF1P62495 437 aaKnown RBP8.88□□□□□ -0.99
HMBOX1-216ENST00000561377 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.88□□□□□ -0.99
HMBOX1-216ENST00000561377 MFSD2AQ8NA29 543 aa8.88□□□□□ -0.99
HMBOX1-216ENST00000561377 ADAMTS6Q9UKP5 1117 aa8.88□□□□□ -0.99
HMBOX1-216ENST00000561377 CAP2P40123 477 aa8.87□□□□□ -0.99
HMBOX1-216ENST00000561377 NKPD1Q17RQ9 610 aa8.87□□□□□ -0.99
HMBOX1-216ENST00000561377 SLC23A3Q6PIS1 610 aa8.87□□□□□ -0.99
HMBOX1-216ENST00000561377 HID1Q8IV36 788 aa8.87□□□□□ -0.99
HMBOX1-216ENST00000561377 POU5F2Q8N7G0 328 aa8.87□□□□□ -0.99
HMBOX1-216ENST00000561377 FBRSQ9HAH7 460 aa8.87□□□□□ -0.99
HMBOX1-216ENST00000561377 SLITRK5O94991 958 aa8.86□□□□□ -0.99
HMBOX1-216ENST00000561377 IKZF1Q13422 519 aa8.86□□□□□ -0.99
HMBOX1-216ENST00000561377 SLBPQ14493 270 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMBOX1-216ENST00000561377 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
HMBOX1-216ENST00000561377 LRRN4CLQ8ND94 238 aa8.86□□□□□ -0.99
HMBOX1-216ENST00000561377 MIPEPQ99797 713 aa8.86□□□□□ -0.99
HMBOX1-216ENST00000561377 TPX2Q9ULW0 747 aaKnown RBP8.86□□□□□ -0.99
HMBOX1-216ENST00000561377 LIG3P49916 1009 aa8.85□□□□□ -0.99
HMBOX1-216ENST00000561377 SFRP5Q5T4F7 317 aa8.85□□□□□ -0.99
HMBOX1-216ENST00000561377 AGMOQ6ZNB7 445 aa8.85□□□□□ -0.99
HMBOX1-216ENST00000561377 TACC3Q9Y6A5 838 aa8.85□□□□□ -0.99
HMBOX1-216ENST00000561377 PITPNM2Q9BZ72 1349 aa8.84□□□□□ -0.99
HMBOX1-216ENST00000561377 ZP2Q05996 745 aa8.84□□□□□ -0.99
HMBOX1-216ENST00000561377 SEPT6Q14141 434 aa8.84□□□□□ -0.99
HMBOX1-216ENST00000561377 NKG7Q16617 165 aa8.84□□□□□ -0.99
HMBOX1-216ENST00000561377 ZNF746Q6NUN9 644 aaPredicted RBP8.84□□□□□ -0.99
HMBOX1-216ENST00000561377 C22orf34Q6ZV56 151 aa8.84□□□□□ -0.99
HMBOX1-216ENST00000561377 FAM168AQ92567 244 aa8.84□□□□□ -0.99
HMBOX1-216ENST00000561377 MIR1-1HGQ9H1L0 117 aa8.84□□□□□ -0.99
HMBOX1-216ENST00000561377 PCDHB5Q9Y5E4 795 aa8.84□□□□□ -0.99
HMBOX1-216ENST00000561377 FAM155AB1AL88 458 aaPredicted RBP8.83□□□□□ -1
HMBOX1-216ENST00000561377 RLBP1P12271 317 aa8.83□□□□□ -1
HMBOX1-216ENST00000561377 PDIA4P13667 645 aaKnown RBP8.83□□□□□ -1
HMBOX1-216ENST00000561377 GRK4P32298 578 aa8.83□□□□□ -1
HMBOX1-216ENST00000561377 CDK8P49336 464 aa8.83□□□□□ -1
HMBOX1-216ENST00000561377 MAP3K11Q16584 847 aa8.83□□□□□ -1
HMBOX1-216ENST00000561377 MFSD4AQ8N468 514 aa8.83□□□□□ -1
HMBOX1-216ENST00000561377 RNF19AQ9NV58 838 aa8.83□□□□□ -1
HMBOX1-216ENST00000561377 CARMIL2Q6F5E8 1435 aa8.82□□□□□ -1
HMBOX1-216ENST00000561377 CST3P01034 146 aaPredicted RBP8.82□□□□□ -1
HMBOX1-216ENST00000561377 ZNF865P0CJ78 1059 aaPredicted RBP8.82□□□□□ -1
HMBOX1-216ENST00000561377 PSMD2Q13200 908 aa8.82□□□□□ -1
HMBOX1-216ENST00000561377 DIEXFQ68CQ4 756 aaKnown RBP8.82□□□□□ -1
HMBOX1-216ENST00000561377 LETMD1Q6P1Q0 360 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms