RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 GTF3C2Q8WUA4 911 aaPredicted RBP7.34□□□□□ -1.23
USP8-216ENST00000561206 BORCS6Q96GS4 357 aa7.34□□□□□ -1.23
USP8-216ENST00000561206 ATP13A1Q9HD20 1204 aa7.34□□□□□ -1.23
USP8-216ENST00000561206 ABCB6Q9NP58 842 aa7.34□□□□□ -1.23
USP8-216ENST00000561206 BMP7P18075 431 aa7.33□□□□□ -1.24
USP8-216ENST00000561206 NTF4P34130 210 aa7.33□□□□□ -1.24
USP8-216ENST00000561206 FAAP100Q0VG06 881 aa7.33□□□□□ -1.24
USP8-216ENST00000561206 MARCH10Q8NA82 808 aaPredicted RBP7.33□□□□□ -1.24
USP8-216ENST00000561206 BAHD1Q8TBE0 780 aaPredicted RBP7.33□□□□□ -1.24
USP8-216ENST00000561206 ALPK1Q96QP1 1244 aa7.33□□□□□ -1.24
USP8-216ENST00000561206 ZC3H12CQ9C0D7 883 aaKnown RBP7.33□□□□□ -1.24
USP8-216ENST00000561206 SSU72Q9NP77 194 aaKnown RBP7.33□□□□□ -1.24
USP8-216ENST00000561206 FAM13AO94988 1023 aa7.32□□□□□ -1.24
USP8-216ENST00000561206 SKOR2Q2VWA4 1001 aaPredicted RBP7.32□□□□□ -1.24
USP8-216ENST00000561206 FOXQ1Q9C009 403 aa7.32□□□□□ -1.24
USP8-216ENST00000561206 PSPNO60542 156 aa7.31□□□□□ -1.24
USP8-216ENST00000561206 HSPA12BQ96MM6 686 aa7.31□□□□□ -1.24
USP8-216ENST00000561206 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.3□□□□□ -1.24
USP8-216ENST00000561206 RAC2P15153 192 aa7.3□□□□□ -1.24
USP8-216ENST00000561206 KRTAP1-1Q07627 177 aa7.3□□□□□ -1.24
USP8-216ENST00000561206 EHD4Q9H223 541 aa7.3□□□□□ -1.24
USP8-216ENST00000561206 PRDM5Q9NQX1 630 aaPredicted RBP7.3□□□□□ -1.24
USP8-216ENST00000561206 CACNA2D2Q9NY47 1150 aa7.3□□□□□ -1.24
USP8-216ENST00000561206 AAMPQ13685 434 aa7.29□□□□□ -1.24
USP8-216ENST00000561206 THAP5Q7Z6K1 395 aa7.29□□□□□ -1.24
USP8-216ENST00000561206 PRRT2Q7Z6L0 340 aaPredicted RBP7.29□□□□□ -1.24
USP8-216ENST00000561206 TMPRSS5Q9H3S3 457 aa7.29□□□□□ -1.24
USP8-216ENST00000561206 TMEM238LA0A1B0GVL6 79 aa7.28□□□□□ -1.24
USP8-216ENST00000561206 ADRB1P08588 477 aa7.28□□□□□ -1.24
USP8-216ENST00000561206 RING1Q06587 406 aa7.28□□□□□ -1.24
USP8-216ENST00000561206 MTMR3Q13615 1198 aa7.28□□□□□ -1.24
USP8-216ENST00000561206 USPL1Q5W0Q7 1092 aa7.28□□□□□ -1.24
USP8-216ENST00000561206 XYLT2Q9H1B5 865 aa7.28□□□□□ -1.24
USP8-216ENST00000561206 ST14Q9Y5Y6 855 aa7.28□□□□□ -1.24
USP8-216ENST00000561206 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.24
USP8-216ENST00000561206 TRIM13O60858 407 aa7.27□□□□□ -1.25
USP8-216ENST00000561206 SEMA7AO75326 666 aa7.27□□□□□ -1.25
USP8-216ENST00000561206 HPXP02790 462 aa7.27□□□□□ -1.25
USP8-216ENST00000561206 DLG4P78352 724 aa7.27□□□□□ -1.25
USP8-216ENST00000561206 CCDC87Q9NVE4 849 aa7.27□□□□□ -1.25
USP8-216ENST00000561206 PEX10O60683 326 aa7.26□□□□□ -1.25
USP8-216ENST00000561206 TCERG1LQ5VWI1 586 aa7.26□□□□□ -1.25
USP8-216ENST00000561206 TTC6Q86TZ1 520 aa7.26□□□□□ -1.25
USP8-216ENST00000561206 ZNF157P51786 506 aaPredicted RBP7.25□□□□□ -1.25
USP8-216ENST00000561206 SF3B2Q13435 895 aaKnown RBP7.25□□□□□ -1.25
USP8-216ENST00000561206 UBE3DQ7Z6J8 389 aa7.25□□□□□ -1.25
USP8-216ENST00000561206 IRF2BP1Q8IU81 584 aa7.25□□□□□ -1.25
USP8-216ENST00000561206 MFSD4AQ8N468 514 aa7.25□□□□□ -1.25
USP8-216ENST00000561206 MYLIPQ8WY64 445 aa7.25□□□□□ -1.25
USP8-216ENST00000561206 KCNB2Q92953 911 aa7.25□□□□□ -1.25
USP8-216ENST00000561206 MCOLN1Q9GZU1 580 aa7.25□□□□□ -1.25
USP8-216ENST00000561206 PRR33A8MZF0 331 aa7.24□□□□□ -1.25
USP8-216ENST00000561206 NEFLP07196 543 aa7.24□□□□□ -1.25
USP8-216ENST00000561206 NPHS2Q9NP85 383 aa7.24□□□□□ -1.25
USP8-216ENST00000561206 TMEM39AQ9NV64 488 aa7.24□□□□□ -1.25
USP8-216ENST00000561206 CAPN6Q9Y6Q1 641 aa7.24□□□□□ -1.25
USP8-216ENST00000561206 FAM155AB1AL88 458 aaPredicted RBP7.23□□□□□ -1.25
USP8-216ENST00000561206 CELA3BP08861 270 aa7.23□□□□□ -1.25
USP8-216ENST00000561206 PPP2R3AQ06190 1150 aa7.23□□□□□ -1.25
USP8-216ENST00000561206 ZNF252P-AS1Q0IIN9 211 aa7.23□□□□□ -1.25
USP8-216ENST00000561206 TMEM151BQ8IW70 566 aa7.23□□□□□ -1.25
USP8-216ENST00000561206 SP110Q9HB58 689 aa7.23□□□□□ -1.25
USP8-216ENST00000561206 SLAMF8Q9P0V8 285 aa7.23□□□□□ -1.25
USP8-216ENST00000561206 TMEM59LQ9UK28 342 aa7.23□□□□□ -1.25
USP8-216ENST00000561206 DNAJC25-GNG10A0A024R161 153 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 MYOCOSA0A1B0GUC4 107 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 H3BS24 57 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 FANCGO15287 622 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 ERVFC1P60507 584 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 ZNF385BQ569K4 471 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 PPM1JQ5JR12 505 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 CDKAL1Q5VV42 579 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 STK35Q8TDR2 534 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 DNAJC25Q9H1X3 360 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 TRAK1Q9UPV9 953 aa7.22□□□□□ -1.25
USP8-216ENST00000561206 LRIG2O94898 1065 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 SLITRK5O94991 958 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 ARNTP27540 789 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 FKBP4Q02790 459 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP8-216ENST00000561206 RALGPS1Q5JS13 557 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 SFRP5Q5T4F7 317 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 ARMCX6Q7L4S7 300 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 SULF2Q8IWU5 870 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 KCT2Q8NC54 265 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 GPBAR1Q8TDU6 330 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 GCM1Q9NP62 436 aa7.21□□□□□ -1.26
USP8-216ENST00000561206 CNOT6Q9ULM6 557 aaKnown RBP7.21□□□□□ -1.26
USP8-216ENST00000561206 TEX51A0A1B0GUA7 166 aa7.2□□□□□ -1.26
USP8-216ENST00000561206 SSFA2P28290 1259 aa7.2□□□□□ -1.26
USP8-216ENST00000561206 ZBTB37Q5TC79 503 aa7.2□□□□□ -1.26
USP8-216ENST00000561206 PBXIP1Q96AQ6 731 aa7.2□□□□□ -1.26
USP8-216ENST00000561206 RNF32Q9H0A6 362 aa7.2□□□□□ -1.26
USP8-216ENST00000561206 CPNE3O75131 537 aaKnown RBP7.19□□□□□ -1.26
USP8-216ENST00000561206 ZXDCQ2QGD7 858 aaPredicted RBP7.19□□□□□ -1.26
USP8-216ENST00000561206 ERICH6BQ5W0A0 696 aa7.19□□□□□ -1.26
USP8-216ENST00000561206 TMPRSS7Q7RTY8 843 aa7.19□□□□□ -1.26
USP8-216ENST00000561206 KCTD3Q9Y597 815 aa7.19□□□□□ -1.26
USP8-216ENST00000561206 RFXAPO00287 272 aa7.18□□□□□ -1.26
USP8-216ENST00000561206 ESR1P03372 595 aa7.18□□□□□ -1.26
USP8-216ENST00000561206 EFEMP1Q12805 493 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms