RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 IFIT2P09913 472 aaKnown RBP15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 CETPP11597 493 aa15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 PDE6AP16499 860 aa15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 CTGFP29279 349 aa15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 OTOP1Q7RTM1 612 aa15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 RIOK1Q9BRS2 568 aaKnown RBP15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 ARHGAP39Q9C0H5 1083 aa15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 BOLA2Q9H3K6 86 aa15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 HPS5Q9UPZ3 1129 aa15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 MYH7P12883 1935 aa15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 HTTP42858 3142 aa15.44■□□□□ 0.06
CHRNA3-208ENST00000561128 ECM2O94769 699 aaPredicted RBP15.43■□□□□ 0.06
CHRNA3-208ENST00000561128 OTUD7AQ8TE49 926 aaPredicted RBP15.43■□□□□ 0.06
CHRNA3-208ENST00000561128 LRRCC1Q9C099 1032 aa15.43■□□□□ 0.06
CHRNA3-208ENST00000561128 AFG3L2Q9Y4W6 797 aa15.43■□□□□ 0.06
CHRNA3-208ENST00000561128 ZHX2Q9Y6X8 837 aa15.43■□□□□ 0.06
CHRNA3-208ENST00000561128 SMIM22K7EJ46 135 aa15.42■□□□□ 0.06
CHRNA3-208ENST00000561128 TBC1D12O60347 775 aa15.42■□□□□ 0.06
CHRNA3-208ENST00000561128 MAP4K4O95819 1239 aaPredicted RBP15.42■□□□□ 0.06
CHRNA3-208ENST00000561128 SOX10P56693 466 aa15.42■□□□□ 0.06
CHRNA3-208ENST00000561128 LCORLQ8N3X6 602 aa15.42■□□□□ 0.06
CHRNA3-208ENST00000561128 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHRNA3-208ENST00000561128 DCTPP1Q9H773 170 aa15.42■□□□□ 0.06
CHRNA3-208ENST00000561128 ZNF532Q9HCE3 1301 aa15.42■□□□□ 0.06
CHRNA3-208ENST00000561128 A0A0G2JLL6 359 aaPredicted RBP15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 TRIM75PA6NK02 468 aa15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 PDHXO00330 501 aa15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 CTNND1O60716 968 aaKnown RBP15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 BAG3O95817 575 aa15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 ATP5JP18859 108 aa15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 PRRT2Q7Z6L0 340 aaPredicted RBP15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 HAUS7Q99871 368 aa15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 NOL10Q9BSC4 688 aaKnown RBP15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 TRIM17Q9Y577 477 aa15.41■□□□□ 0.06
CHRNA3-208ENST00000561128 GDF11O95390 407 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 CYP2C8P10632 490 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 PLCG2P16885 1265 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 CAP2P40123 477 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 MAP3K12Q12852 859 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 SLC9C2Q5TAH2 1124 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 OTUD7BQ6GQQ9 843 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 ANKRD23Q86SG2 305 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 METTL16Q86W50 562 aaKnown RBP15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 CHMP4BQ9H444 224 aaKnown RBP15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 PICK1Q9NRD5 415 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 PAG1Q9NWQ8 432 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 CPA4Q9UI42 421 aa15.4■□□□□ 0.06
CHRNA3-208ENST00000561128 PRKAB2O43741 272 aa15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 TLR2O60603 784 aa15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 CYP2D6P10635 497 aa15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 ADD2P35612 726 aa15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 SP3Q02447 781 aa15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 TREML2Q5T2D2 321 aa15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 FBXO46Q6PJ61 603 aaPredicted RBP15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 GADL1Q6ZQY3 521 aa15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 SDR42E1Q8WUS8 393 aa15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 ZFYVE28Q9HCC9 887 aa15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 BAZ2AQ9UIF9 1905 aaKnown RBP15.39■□□□□ 0.05
CHRNA3-208ENST00000561128 CXCL11O14625 94 aa15.38■□□□□ 0.05
CHRNA3-208ENST00000561128 PLCD1P51178 756 aa15.38■□□□□ 0.05
CHRNA3-208ENST00000561128 C17orf99Q6UX52 265 aa15.38■□□□□ 0.05
CHRNA3-208ENST00000561128 ARMT1Q9H993 441 aa15.38■□□□□ 0.05
CHRNA3-208ENST00000561128 ZCCHC17Q9NP64 241 aaKnown RBP15.38■□□□□ 0.05
CHRNA3-208ENST00000561128 PI4KBQ9UBF8 816 aa15.38■□□□□ 0.05
CHRNA3-208ENST00000561128 HERC5Q9UII4 1024 aaKnown RBP15.38■□□□□ 0.05
CHRNA3-208ENST00000561128 MAGEB6P1A0A0J9YX57 407 aa15.37■□□□□ 0.05
CHRNA3-208ENST00000561128 MBD4O95243 580 aa15.37■□□□□ 0.05
CHRNA3-208ENST00000561128 USP5P45974 858 aa15.37■□□□□ 0.05
CHRNA3-208ENST00000561128 SPP2Q13103 211 aa15.37■□□□□ 0.05
CHRNA3-208ENST00000561128 TTF1Q15361 905 aaPredicted RBP15.37■□□□□ 0.05
CHRNA3-208ENST00000561128 ERO1AQ96HE7 468 aa15.37■□□□□ 0.05
CHRNA3-208ENST00000561128 DHX36Q9H2U1 1008 aaKnown RBP15.37■□□□□ 0.05
CHRNA3-208ENST00000561128 SALL3Q9BXA9 1300 aa15.37■□□□□ 0.05
CHRNA3-208ENST00000561128 MGAMO43451 1857 aa15.36■□□□□ 0.05
CHRNA3-208ENST00000561128 CYP2D7A0A087X1C5 515 aa15.36■□□□□ 0.05
CHRNA3-208ENST00000561128 PEX10O60683 326 aa15.36■□□□□ 0.05
CHRNA3-208ENST00000561128 HMGCS2P54868 508 aa15.36■□□□□ 0.05
CHRNA3-208ENST00000561128 LACTBP83111 547 aaPredicted RBP15.36■□□□□ 0.05
CHRNA3-208ENST00000561128 SLC44A5Q8NCS7 719 aa15.36■□□□□ 0.05
CHRNA3-208ENST00000561128 ZBTB21Q9ULJ3 1066 aa15.36■□□□□ 0.05
CHRNA3-208ENST00000561128 PTPN22Q9Y2R2 807 aa15.36■□□□□ 0.05
CHRNA3-208ENST00000561128 PTCH2Q9Y6C5 1203 aa15.36■□□□□ 0.05
CHRNA3-208ENST00000561128 IGSF3O75054 1194 aa15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 BCRP11274 1271 aa15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 SHMT1P34896 483 aa15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 MTMR2Q13614 643 aa15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 PKN2Q16513 984 aaKnown RBP15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 CRACR2BQ8N4Y2 399 aaPredicted RBP15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 PI4K2BQ8TCG2 481 aa15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 TRIM47Q96LD4 638 aa15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 PUS7LQ9H0K6 701 aaKnown RBP15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 EFCC1Q9HA90 598 aa15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 ECHDC1Q9NTX5 307 aa15.35■□□□□ 0.05
CHRNA3-208ENST00000561128 RBBP6Q7Z6E9 1792 aaKnown RBP15.34■□□□□ 0.05
CHRNA3-208ENST00000561128 GH2P01242 217 aa15.34■□□□□ 0.05
CHRNA3-208ENST00000561128 GUCY1A2P33402 732 aa15.34■□□□□ 0.05
CHRNA3-208ENST00000561128 RGS19P49795 217 aa15.34■□□□□ 0.05
CHRNA3-208ENST00000561128 GABPAQ06546 454 aa15.34■□□□□ 0.05
CHRNA3-208ENST00000561128 ZNF280CQ8ND82 737 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms