RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 PARP2Q9UGN5 583 aa7.81□□□□□ -1.16
PSMA4-221ENST00000560842 AK5Q9Y6K8 562 aa7.81□□□□□ -1.16
PSMA4-221ENST00000560842 LEFTY1O75610 366 aa7.8□□□□□ -1.16
PSMA4-221ENST00000560842 LIG1P18858 919 aa7.8□□□□□ -1.16
PSMA4-221ENST00000560842 KCNMB1Q16558 191 aa7.8□□□□□ -1.16
PSMA4-221ENST00000560842 MLANAQ16655 118 aa7.8□□□□□ -1.16
PSMA4-221ENST00000560842 LILRA6Q6PI73 481 aa7.8□□□□□ -1.16
PSMA4-221ENST00000560842 SIAH1Q8IUQ4 282 aa7.8□□□□□ -1.16
PSMA4-221ENST00000560842 RGS22Q8NE09 1264 aa7.8□□□□□ -1.16
PSMA4-221ENST00000560842 ZSCAN18Q8TBC5 510 aaPredicted RBP7.8□□□□□ -1.16
PSMA4-221ENST00000560842 FAM8A1Q9UBU6 413 aa7.8□□□□□ -1.16
PSMA4-221ENST00000560842 TSPAN15O95858 294 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 SLFN14P0C7P3 912 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 GSTT1P30711 240 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 FCGRTP55899 365 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 ID3Q02535 119 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 ARHGAP27Q6ZUM4 889 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 DUSP23Q9BVJ7 150 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 BCL2L13Q9BXK5 485 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 TNKS2Q9H2K2 1166 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 DISC1Q9NRI5 854 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 PPM1HQ9ULR3 514 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 SNX11Q9Y5W9 270 aa7.79□□□□□ -1.16
PSMA4-221ENST00000560842 RBM47A0AV96 593 aaKnown RBP7.78□□□□□ -1.16
PSMA4-221ENST00000560842 FAAP100Q0VG06 881 aa7.78□□□□□ -1.16
PSMA4-221ENST00000560842 LCNL1Q6ZST4 164 aa7.78□□□□□ -1.16
PSMA4-221ENST00000560842 PPP1R16BQ96T49 567 aa7.78□□□□□ -1.16
PSMA4-221ENST00000560842 CCDC86Q9H6F5 360 aaKnown RBP7.78□□□□□ -1.16
PSMA4-221ENST00000560842 ZNF862O60290 1169 aa7.77□□□□□ -1.17
PSMA4-221ENST00000560842 EIF4BP23588 611 aaKnown RBP7.77□□□□□ -1.17
PSMA4-221ENST00000560842 DTHD1Q6ZMT9 781 aa7.77□□□□□ -1.17
PSMA4-221ENST00000560842 PRDM7Q9NQW5 492 aa7.77□□□□□ -1.17
PSMA4-221ENST00000560842 PCOLCE2Q9UKZ9 415 aa7.77□□□□□ -1.17
PSMA4-221ENST00000560842 PCDHGC5Q9Y5F6 944 aa7.77□□□□□ -1.17
PSMA4-221ENST00000560842 NCANO14594 1321 aa7.77□□□□□ -1.17
PSMA4-221ENST00000560842 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.76□□□□□ -1.17
PSMA4-221ENST00000560842 PRRG2O14669 202 aa7.76□□□□□ -1.17
PSMA4-221ENST00000560842 ZNF16P17020 682 aaPredicted RBP7.76□□□□□ -1.17
PSMA4-221ENST00000560842 TTLL4Q14679 1199 aa7.76□□□□□ -1.17
PSMA4-221ENST00000560842 KIF4BQ2VIQ3 1234 aa7.76□□□□□ -1.17
PSMA4-221ENST00000560842 LRRC56Q8IYG6 542 aaPredicted RBP7.76□□□□□ -1.17
PSMA4-221ENST00000560842 GIPC2Q8TF65 315 aa7.76□□□□□ -1.17
PSMA4-221ENST00000560842 CCDC9Q9Y3X0 531 aaKnown RBP7.76□□□□□ -1.17
PSMA4-221ENST00000560842 RNGTTO60942 597 aaKnown RBP7.75□□□□□ -1.17
PSMA4-221ENST00000560842 USP17L7P0C7H9 530 aa7.75□□□□□ -1.17
PSMA4-221ENST00000560842 ZNF326Q5BKZ1 582 aaKnown RBP7.75□□□□□ -1.17
PSMA4-221ENST00000560842 ANKLE2Q86XL3 938 aa7.75□□□□□ -1.17
PSMA4-221ENST00000560842 ASB11Q8WXH4 323 aa7.75□□□□□ -1.17
PSMA4-221ENST00000560842 LIN37Q96GY3 246 aaPredicted RBP7.75□□□□□ -1.17
PSMA4-221ENST00000560842 CTNND2Q9UQB3 1225 aa7.75□□□□□ -1.17
PSMA4-221ENST00000560842 CTSHP09668 335 aa7.74□□□□□ -1.17
PSMA4-221ENST00000560842 XPCQ01831 940 aaPredicted RBP7.74□□□□□ -1.17
PSMA4-221ENST00000560842 PSMD2Q13200 908 aa7.74□□□□□ -1.17
PSMA4-221ENST00000560842 MRPL58Q14197 206 aaKnown RBP7.74□□□□□ -1.17
PSMA4-221ENST00000560842 NECAB3Q96P71 396 aaPredicted RBP7.74□□□□□ -1.17
PSMA4-221ENST00000560842 ZC3H12CQ9C0D7 883 aaKnown RBP7.74□□□□□ -1.17
PSMA4-221ENST00000560842 KRT82Q9NSB4 513 aa7.74□□□□□ -1.17
PSMA4-221ENST00000560842 ZSCAN22P10073 491 aaPredicted RBP7.73□□□□□ -1.17
PSMA4-221ENST00000560842 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
PSMA4-221ENST00000560842 ITIH2P19823 946 aa7.73□□□□□ -1.17
PSMA4-221ENST00000560842 ZP2Q05996 745 aa7.73□□□□□ -1.17
PSMA4-221ENST00000560842 SYDE1Q6ZW31 735 aaPredicted RBP7.73□□□□□ -1.17
PSMA4-221ENST00000560842 FAM214BQ7L5A3 538 aa7.73□□□□□ -1.17
PSMA4-221ENST00000560842 HEXIM2Q96MH2 286 aaKnown RBP7.73□□□□□ -1.17
PSMA4-221ENST00000560842 TMEM39AQ9NV64 488 aa7.73□□□□□ -1.17
PSMA4-221ENST00000560842 AKAP2Q9Y2D5 859 aa7.73□□□□□ -1.17
PSMA4-221ENST00000560842 B8ZZF3 427 aa7.72□□□□□ -1.17
PSMA4-221ENST00000560842 SORBS3O60504 671 aa7.72□□□□□ -1.17
PSMA4-221ENST00000560842 ITGAEP38570 1179 aa7.72□□□□□ -1.17
PSMA4-221ENST00000560842 AFMP43652 599 aa7.72□□□□□ -1.17
PSMA4-221ENST00000560842 HNRNPUQ00839 825 aaKnown RBP eCLIP7.72□□□□□ -1.17
PSMA4-221ENST00000560842 FYB2Q5VWT5 728 aa7.72□□□□□ -1.17
PSMA4-221ENST00000560842 FAM161BQ96MY7 647 aa7.72□□□□□ -1.17
PSMA4-221ENST00000560842 CEP44Q9C0F1 390 aa7.72□□□□□ -1.17
PSMA4-221ENST00000560842 RAPGEFL1Q9UHV5 662 aa7.72□□□□□ -1.17
PSMA4-221ENST00000560842 USP31Q70CQ4 1352 aa7.71□□□□□ -1.17
PSMA4-221ENST00000560842 ENC1O14682 589 aa7.71□□□□□ -1.18
PSMA4-221ENST00000560842 NEFMP07197 916 aa7.71□□□□□ -1.18
PSMA4-221ENST00000560842 GSTP1P09211 210 aaKnown RBP7.71□□□□□ -1.18
PSMA4-221ENST00000560842 ST13P50502 369 aaKnown RBP7.71□□□□□ -1.18
PSMA4-221ENST00000560842 ZNF157P51786 506 aaPredicted RBP7.71□□□□□ -1.18
PSMA4-221ENST00000560842 IKZF1Q13422 519 aa7.71□□□□□ -1.18
PSMA4-221ENST00000560842 TTLL10Q6ZVT0 673 aa7.71□□□□□ -1.18
PSMA4-221ENST00000560842 TOP6BLQ8N6T0 577 aa7.71□□□□□ -1.18
PSMA4-221ENST00000560842 LMCD1Q9NZU5 365 aa7.71□□□□□ -1.18
PSMA4-221ENST00000560842 IGF2BP3O00425 579 aaKnown RBP eCLIP7.7□□□□□ -1.18
PSMA4-221ENST00000560842 KRT1P04264 644 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 GLI1P08151 1106 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 PPP2R3AQ06190 1150 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 PRR23BQ6ZRT6 265 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 SV2BQ7L1I2 683 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 PDZD3Q86UT5 571 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 CRELD1Q96HD1 420 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 CACNA2D2Q9NY47 1150 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 PODXL2Q9NZ53 605 aa7.7□□□□□ -1.18
PSMA4-221ENST00000560842 C1QTNF9P0C862 333 aa7.69□□□□□ -1.18
PSMA4-221ENST00000560842 AMIGO3Q86WK7 504 aa7.69□□□□□ -1.18
PSMA4-221ENST00000560842 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
PSMA4-221ENST00000560842 SPACA3Q8IXA5 215 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms