RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 TDRD3Q9H7E2 651 aaKnown RBP8.46□□□□□ -1.06
CTDSPL2-210ENST00000560834 ARMT1Q9H993 441 aa8.46□□□□□ -1.06
CTDSPL2-210ENST00000560834 DDX4Q9NQI0 724 aaKnown RBP8.46□□□□□ -1.06
CTDSPL2-210ENST00000560834 HELLSQ9NRZ9 838 aa8.46□□□□□ -1.06
CTDSPL2-210ENST00000560834 GGA3Q9NZ52 723 aa8.46□□□□□ -1.06
CTDSPL2-210ENST00000560834 FLT1P17948 1338 aa8.46□□□□□ -1.06
CTDSPL2-210ENST00000560834 CCDC171Q6TFL3 1326 aa8.46□□□□□ -1.06
CTDSPL2-210ENST00000560834 RPAP1Q9BWH6 1393 aaPredicted RBP8.46□□□□□ -1.06
CTDSPL2-210ENST00000560834 MYH8P13535 1937 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 POLR2AP24928 1970 aaKnown RBP8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 SGSM2O43147 1006 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 BAG3O95817 575 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 CACNB3P54284 484 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 NFIAQ12857 509 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 C8orf34Q49A92 452 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 MCMDC2Q4G0Z9 681 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 RBM26Q5T8P6 1007 aaKnown RBP8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 VPS53Q5VIR6 699 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 CWC27Q6UX04 472 aaKnown RBP8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 CERS3Q8IU89 383 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 AIDAQ96BJ3 306 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 STRBPQ96SI9 672 aaKnown RBP8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 IDI2Q9BXS1 227 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 RRAGCQ9HB90 399 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 EPB41L4AQ9HCS5 686 aaPredicted RBP8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 PLA2G2EQ9NZK7 142 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 ZNF70Q9UC06 446 aaPredicted RBP8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 FAM198AQ9UFP1 575 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 PITPNM2Q9BZ72 1349 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 ATRNL1Q5VV63 1379 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 ATAD5Q96QE3 1844 aa8.45□□□□□ -1.06
CTDSPL2-210ENST00000560834 KIF3CO14782 793 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 PRKAB2O43741 272 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 VEGFAP15692 232 aaPredicted RBP8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 YY1P25490 414 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 ANGEL2Q5VTE6 544 aaKnown RBP8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 SMYD5Q6GMV2 418 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 TEX11Q8IYF3 940 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 SDR42E1Q8WUS8 393 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 NOL10Q9BSC4 688 aaKnown RBP8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 USP40Q9NVE5 1235 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 MKRN1Q9UHC7 482 aaKnown RBP8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 PGAP2Q9UHJ9 254 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 ZMYM6O95789 1325 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 TRPM7Q96QT4 1865 aa8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 GREB1LQ9C091 1923 aaPredicted RBP8.44□□□□□ -1.06
CTDSPL2-210ENST00000560834 DOCK1Q14185 1865 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 GSG1L2A8MUP6 293 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 MYO1BO43795 1136 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 EAPPQ56P03 285 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 FKBP1CQ5VVH2 108 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 PNMA8AQ86V59 439 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 LDHDQ86WU2 507 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 APOBEC3FQ8IUX4 373 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 MAPKAPK5Q8IW41 473 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 TGFBRAP1Q8WUH2 860 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 RUFY2Q8WXA3 655 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 CRNKL1Q9BZJ0 848 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 OSBPL5Q9H0X9 879 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 VEZTQ9HBM0 779 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 GPBP1L1Q9HC44 474 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 SCAF8Q9UPN6 1271 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 SLC4A4Q9Y6R1 1079 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 ROBO3Q96MS0 1386 aa8.43□□□□□ -1.06
CTDSPL2-210ENST00000560834 TCP10L2B9ZVM9 353 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 ADM5C9JUS6 153 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 ENTPD3O75355 529 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 HSPD1P10809 573 aaKnown RBP8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 GNAT2P19087 354 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 USP5P45974 858 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 PTH1RQ03431 593 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 PICALMQ13492 652 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 CASC1Q6TDU7 716 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 SH3BP5LQ7L8J4 393 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 FAM83AQ86UY5 434 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 ZFPM1Q8IX07 1006 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 DSCC1Q9BVC3 393 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 LSG1Q9H089 658 aaKnown RBP8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 DCP1AQ9NPI6 582 aaPredicted RBP8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 GPHNQ9NQX3 736 aaPredicted RBP8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 ATP8A2Q9NTI2 1148 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 TMOD2Q9NZR1 351 aa8.42□□□□□ -1.06
CTDSPL2-210ENST00000560834 DDTLA6NHG4 134 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 SMIM22K7EJ46 135 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 MFAP1P55081 439 aaKnown RBP8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 TCP10Q12799 353 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 TNFAIP1Q13829 316 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 RASA3Q14644 834 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 PPP1R15BQ5SWA1 713 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 GIMAP6Q6P9H5 292 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 IFNL3Q8IZI9 196 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 FAM151AQ8WW52 585 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 TEPSINQ96N21 525 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 GLIS2Q9BZE0 524 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 TMEM39BQ9GZU3 492 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 ARPP21Q9UBL0 812 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 SAP30BPQ9UHR5 308 aaKnown RBP8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 PPP2R3BQ9Y5P8 575 aa8.41□□□□□ -1.06
CTDSPL2-210ENST00000560834 PHIPQ8WWQ0 1821 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms