RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 RCAN3Q9UKA8 241 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 AFG3L2Q9Y4W6 797 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 ZHX2Q9Y6X8 837 aa13.73□□□□□ -0.21
GABPB1-210ENST00000560825 DOCK3Q8IZD9 2030 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 PDHXO00330 501 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 TLR2O60603 784 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 PKN2Q16513 984 aaKnown RBP13.72□□□□□ -0.21
GABPB1-210ENST00000560825 OTUD7BQ6GQQ9 843 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 C17orf99Q6UX52 265 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 MAPKAPK5Q8IW41 473 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 SCYL3Q8IZE3 742 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 EDC3Q96F86 508 aaKnown RBP13.72□□□□□ -0.21
GABPB1-210ENST00000560825 ZFYVE28Q9HCC9 887 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 PTCH2Q9Y6C5 1203 aa13.72□□□□□ -0.21
GABPB1-210ENST00000560825 PLXNB2O15031 1838 aa13.71□□□□□ -0.21
GABPB1-210ENST00000560825 BAZ2AQ9UIF9 1905 aaKnown RBP13.71□□□□□ -0.21
GABPB1-210ENST00000560825 COL2A1P02458 1487 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-210ENST00000560825 CCDC158Q5M9N0 1113 aa13.71□□□□□ -0.22
GABPB1-210ENST00000560825 NAA16Q6N069 864 aaPredicted RBP13.71□□□□□ -0.22
GABPB1-210ENST00000560825 MIGA1Q8NAN2 632 aa13.71□□□□□ -0.22
GABPB1-210ENST00000560825 RHPN1Q8TCX5 695 aa13.71□□□□□ -0.22
GABPB1-210ENST00000560825 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.22
GABPB1-210ENST00000560825 HOOK2Q96ED9 719 aa13.71□□□□□ -0.22
GABPB1-210ENST00000560825 ERO1AQ96HE7 468 aa13.71□□□□□ -0.22
GABPB1-210ENST00000560825 ZNF512BQ96KM6 892 aaPredicted RBP13.71□□□□□ -0.22
GABPB1-210ENST00000560825 EFCC1Q9HA90 598 aa13.71□□□□□ -0.22
GABPB1-210ENST00000560825 SAP30BPQ9UHR5 308 aaKnown RBP13.71□□□□□ -0.22
GABPB1-210ENST00000560825 A0A0G2JLL6 359 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-210ENST00000560825 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
GABPB1-210ENST00000560825 MYCP01106 439 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-210ENST00000560825 LACTBP83111 547 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-210ENST00000560825 TREML2Q5T2D2 321 aa13.7□□□□□ -0.22
GABPB1-210ENST00000560825 PRRT2Q7Z6L0 340 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-210ENST00000560825 ANKRD23Q86SG2 305 aa13.7□□□□□ -0.22
GABPB1-210ENST00000560825 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
GABPB1-210ENST00000560825 TRIM47Q96LD4 638 aa13.7□□□□□ -0.22
GABPB1-210ENST00000560825 PALD1Q9ULE6 856 aa13.7□□□□□ -0.22
GABPB1-210ENST00000560825 FLT1P17948 1338 aa13.7□□□□□ -0.22
GABPB1-210ENST00000560825 PEX10O60683 326 aa13.69□□□□□ -0.22
GABPB1-210ENST00000560825 GSTO1P78417 241 aa13.69□□□□□ -0.22
GABPB1-210ENST00000560825 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.69□□□□□ -0.22
GABPB1-210ENST00000560825 SMIM22K7EJ46 135 aa13.68□□□□□ -0.22
GABPB1-210ENST00000560825 SMARCA5O60264 1052 aaPredicted RBP13.68□□□□□ -0.22
GABPB1-210ENST00000560825 CTNND1O60716 968 aaKnown RBP13.68□□□□□ -0.22
GABPB1-210ENST00000560825 IDH1O75874 414 aaKnown RBP13.68□□□□□ -0.22
GABPB1-210ENST00000560825 LDHCP07864 332 aa13.68□□□□□ -0.22
GABPB1-210ENST00000560825 PPP4CP60510 307 aa13.68□□□□□ -0.22
GABPB1-210ENST00000560825 GADL1Q6ZQY3 521 aa13.68□□□□□ -0.22
GABPB1-210ENST00000560825 MAGEB6Q8N7X4 407 aa13.68□□□□□ -0.22
GABPB1-210ENST00000560825 SH3TC2Q8TF17 1288 aa13.68□□□□□ -0.22
GABPB1-210ENST00000560825 MYH8P13535 1937 aa13.68□□□□□ -0.22
GABPB1-210ENST00000560825 PDE4DIPQ5VU43 2346 aa13.67□□□□□ -0.22
GABPB1-210ENST00000560825 TBC1D12O60347 775 aa13.67□□□□□ -0.22
GABPB1-210ENST00000560825 BCRP11274 1271 aa13.67□□□□□ -0.22
GABPB1-210ENST00000560825 EN2P19622 333 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-210ENST00000560825 CYP7A1P22680 504 aa13.67□□□□□ -0.22
GABPB1-210ENST00000560825 PICK1Q9NRD5 415 aa13.67□□□□□ -0.22
GABPB1-210ENST00000560825 CXCL11O14625 94 aa13.66□□□□□ -0.22
GABPB1-210ENST00000560825 GDF11O95390 407 aa13.66□□□□□ -0.22
GABPB1-210ENST00000560825 CAP2P40123 477 aa13.66□□□□□ -0.22
GABPB1-210ENST00000560825 ARMC5Q96C12 935 aa13.66□□□□□ -0.22
GABPB1-210ENST00000560825 ZNF333Q96JL9 665 aa13.66□□□□□ -0.22
GABPB1-210ENST00000560825 ZCCHC17Q9NP64 241 aaKnown RBP13.66□□□□□ -0.22
GABPB1-210ENST00000560825 DDX19BQ9UMR2 479 aa13.66□□□□□ -0.22
GABPB1-210ENST00000560825 KIAA0100Q14667 2235 aaKnown RBP13.66□□□□□ -0.22
GABPB1-210ENST00000560825 PSMC4P43686 418 aa13.65□□□□□ -0.22
GABPB1-210ENST00000560825 SPP2Q13103 211 aa13.65□□□□□ -0.22
GABPB1-210ENST00000560825 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-210ENST00000560825 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.22
GABPB1-210ENST00000560825 GABRQQ9UN88 632 aa13.65□□□□□ -0.22
GABPB1-210ENST00000560825 TCRBV5S4A2TA0A5A2 114 aa13.64□□□□□ -0.23
GABPB1-210ENST00000560825 GOLIM4O00461 696 aa13.64□□□□□ -0.23
GABPB1-210ENST00000560825 OSBPP22059 807 aa13.64□□□□□ -0.23
GABPB1-210ENST00000560825 HMGCS2P54868 508 aa13.64□□□□□ -0.23
GABPB1-210ENST00000560825 POTEEQ6S8J3 1075 aa13.64□□□□□ -0.23
GABPB1-210ENST00000560825 METTL16Q86W50 562 aaKnown RBP13.64□□□□□ -0.23
GABPB1-210ENST00000560825 PLCD1P51178 756 aa13.64□□□□□ -0.23
GABPB1-210ENST00000560825 MTFR1Q15390 333 aa13.64□□□□□ -0.23
GABPB1-210ENST00000560825 ERC1Q8IUD2 1116 aa13.64□□□□□ -0.23
GABPB1-210ENST00000560825 DNAJC2Q99543 621 aaKnown RBP13.64□□□□□ -0.23
GABPB1-210ENST00000560825 PARP14Q460N5 1801 aa13.63□□□□□ -0.23
GABPB1-210ENST00000560825 BAG3O95817 575 aa13.63□□□□□ -0.23
GABPB1-210ENST00000560825 CYP2D6P10635 497 aa13.63□□□□□ -0.23
GABPB1-210ENST00000560825 PDE6AP16499 860 aa13.63□□□□□ -0.23
GABPB1-210ENST00000560825 PRKCZQ05513 592 aa13.63□□□□□ -0.23
GABPB1-210ENST00000560825 TSHZ3Q63HK5 1081 aa13.63□□□□□ -0.23
GABPB1-210ENST00000560825 LCORLQ8N3X6 602 aa13.63□□□□□ -0.23
GABPB1-210ENST00000560825 KIF1BPQ96EK5 621 aa13.63□□□□□ -0.23
GABPB1-210ENST00000560825 PI4KBQ9UBF8 816 aa13.63□□□□□ -0.23
GABPB1-210ENST00000560825 RLFQ13129 1914 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 ZNF532Q9HCE3 1301 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 DNAH12Q6ZR08 3092 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 MAP4K4O95819 1239 aaPredicted RBP13.62□□□□□ -0.23
GABPB1-210ENST00000560825 MTMR2Q13614 643 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 SLC9C1Q4G0N8 1177 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 ANKRD13CQ8N6S4 541 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 ZNF280CQ8ND82 737 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 SDR42E1Q8WUS8 393 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 PARK7Q99497 189 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms