RNA–Protein interactions for RNA: ENST00000560785.1

PCSK6-212, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 4

Gene PCSK6, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-212ENST00000560785 TIMM10P62072 90 aa15.22■□□□□ 0.03
PCSK6-212ENST00000560785 GSTO1P78417 241 aa15.22■□□□□ 0.03
PCSK6-212ENST00000560785 SH3D19Q5HYK7 790 aa15.22■□□□□ 0.03
PCSK6-212ENST00000560785 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
PCSK6-212ENST00000560785 ERICH6Q7L0X2 663 aa15.22■□□□□ 0.03
PCSK6-212ENST00000560785 NSUN4Q96CB9 384 aaKnown RBP15.22■□□□□ 0.03
PCSK6-212ENST00000560785 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
PCSK6-212ENST00000560785 HMG20BQ9P0W2 317 aa15.22■□□□□ 0.03
PCSK6-212ENST00000560785 LAMA3Q16787 3333 aa15.22■□□□□ 0.03
PCSK6-212ENST00000560785 IGSF3O75054 1194 aa15.21■□□□□ 0.03
PCSK6-212ENST00000560785 GNAI3P08754 354 aa15.21■□□□□ 0.03
PCSK6-212ENST00000560785 CAP2P40123 477 aa15.21■□□□□ 0.03
PCSK6-212ENST00000560785 PICALMQ13492 652 aa15.21■□□□□ 0.03
PCSK6-212ENST00000560785 ANKRD13CQ8N6S4 541 aa15.21■□□□□ 0.03
PCSK6-212ENST00000560785 ZNF280CQ8ND82 737 aa15.21■□□□□ 0.03
PCSK6-212ENST00000560785 DEFB118Q96PH6 123 aa15.21■□□□□ 0.03
PCSK6-212ENST00000560785 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.21■□□□□ 0.03
PCSK6-212ENST00000560785 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
PCSK6-212ENST00000560785 HERC5Q9UII4 1024 aaKnown RBP15.21■□□□□ 0.03
PCSK6-212ENST00000560785 PLXNB2O15031 1838 aa15.2■□□□□ 0.02
PCSK6-212ENST00000560785 SRGAP3O43295 1099 aa15.2■□□□□ 0.02
PCSK6-212ENST00000560785 EVI5O60447 810 aa15.2■□□□□ 0.02
PCSK6-212ENST00000560785 HMGCRP04035 888 aa15.2■□□□□ 0.02
PCSK6-212ENST00000560785 LDHCP07864 332 aa15.2■□□□□ 0.02
PCSK6-212ENST00000560785 TFCP2Q12800 502 aa15.2■□□□□ 0.02
PCSK6-212ENST00000560785 PABPC4Q13310 644 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCSK6-212ENST00000560785 SPATA5Q8NB90 893 aa15.2■□□□□ 0.02
PCSK6-212ENST00000560785 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.2■□□□□ 0.021e-6■■■■■ 28.4
PCSK6-212ENST00000560785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.2■□□□□ 0.021e-9■■■■■ 35.2
PCSK6-212ENST00000560785 GJD2Q9UKL4 321 aa15.2■□□□□ 0.02
PCSK6-212ENST00000560785 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
PCSK6-212ENST00000560785 BMP8BP34820 402 aa15.19■□□□□ 0.02
PCSK6-212ENST00000560785 RARSP54136 660 aaKnown RBP15.19■□□□□ 0.02
PCSK6-212ENST00000560785 SPP2Q13103 211 aa15.19■□□□□ 0.02
PCSK6-212ENST00000560785 CCDC84Q86UT8 332 aaPredicted RBP15.19■□□□□ 0.02
PCSK6-212ENST00000560785 METTL16Q86W50 562 aaKnown RBP15.19■□□□□ 0.02
PCSK6-212ENST00000560785 WDR18Q9BV38 432 aa15.19■□□□□ 0.02
PCSK6-212ENST00000560785 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.19■□□□□ 0.02
PCSK6-212ENST00000560785 USP17L5A8MUK1 530 aa15.18■□□□□ 0.02
PCSK6-212ENST00000560785 TFRCP02786 760 aaKnown RBP15.18■□□□□ 0.02
PCSK6-212ENST00000560785 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
PCSK6-212ENST00000560785 GPR153Q6NV75 609 aa15.18■□□□□ 0.02
PCSK6-212ENST00000560785 NECAB2Q7Z6G3 386 aa15.18■□□□□ 0.02
PCSK6-212ENST00000560785 GDF15Q99988 308 aa15.18■□□□□ 0.02
PCSK6-212ENST00000560785 ASCC2Q9H1I8 757 aaPredicted RBP15.18■□□□□ 0.02
PCSK6-212ENST00000560785 DHX36Q9H2U1 1008 aaKnown RBP15.18■□□□□ 0.02
PCSK6-212ENST00000560785 RPTORQ8N122 1335 aa15.17■□□□□ 0.02
PCSK6-212ENST00000560785 CDK5RAP2Q96SN8 1893 aa15.17■□□□□ 0.02
PCSK6-212ENST00000560785 FAM196BA6NMK8 535 aa15.17■□□□□ 0.02
PCSK6-212ENST00000560785 HOXA7P31268 230 aaPredicted RBP15.17■□□□□ 0.02
PCSK6-212ENST00000560785 MCAMP43121 646 aa15.17■□□□□ 0.02
PCSK6-212ENST00000560785 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
PCSK6-212ENST00000560785 HMGCS2P54868 508 aa15.17■□□□□ 0.02
PCSK6-212ENST00000560785 RRP1BQ14684 758 aaKnown RBP15.17■□□□□ 0.02
PCSK6-212ENST00000560785 PI16Q6UXB8 463 aa15.17■□□□□ 0.02
PCSK6-212ENST00000560785 PAWRQ96IZ0 340 aaKnown RBP15.17■□□□□ 0.02
PCSK6-212ENST00000560785 AS3MTQ9HBK9 375 aa15.17■□□□□ 0.02
PCSK6-212ENST00000560785 GINM1Q9NU53 330 aa15.17■□□□□ 0.02
PCSK6-212ENST00000560785 UQCRFS1P1P0C7P4 283 aa15.16■□□□□ 0.02
PCSK6-212ENST00000560785 XRCC5P13010 732 aaKnown RBP15.16■□□□□ 0.02
PCSK6-212ENST00000560785 DIS3LQ8TF46 1054 aaKnown RBP15.16■□□□□ 0.02
PCSK6-212ENST00000560785 PI4KBQ9UBF8 816 aa15.16■□□□□ 0.02
PCSK6-212ENST00000560785 OGDHLQ9ULD0 1010 aa15.16■□□□□ 0.02
PCSK6-212ENST00000560785 DDX60LQ5H9U9 1706 aaKnown RBP15.16■□□□□ 0.02
PCSK6-212ENST00000560785 SOX1O00570 391 aaPredicted RBP15.15■□□□□ 0.02
PCSK6-212ENST00000560785 ASNSP08243 561 aa15.15■□□□□ 0.02
PCSK6-212ENST00000560785 PLCG2P16885 1265 aa15.15■□□□□ 0.02
PCSK6-212ENST00000560785 BACE1P56817 501 aa15.15■□□□□ 0.02
PCSK6-212ENST00000560785 PPP4CP60510 307 aa15.15■□□□□ 0.02
PCSK6-212ENST00000560785 SOCS4Q8WXH5 440 aa15.15■□□□□ 0.02
PCSK6-212ENST00000560785 ZNF512BQ96KM6 892 aaPredicted RBP15.15■□□□□ 0.02
PCSK6-212ENST00000560785 DNAJC18Q9H819 358 aa15.15■□□□□ 0.02
PCSK6-212ENST00000560785 HMX1Q9NP08 348 aaPredicted RBP15.15■□□□□ 0.02
PCSK6-212ENST00000560785 GPR108Q9NPR9 543 aa15.15■□□□□ 0.02
PCSK6-212ENST00000560785 C19orf81C9J6K1 198 aa15.14■□□□□ 0.01
PCSK6-212ENST00000560785 TBC1D9Q6ZT07 1266 aa15.14■□□□□ 0.01
PCSK6-212ENST00000560785 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
PCSK6-212ENST00000560785 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
PCSK6-212ENST00000560785 TRIB2Q92519 343 aa15.14■□□□□ 0.01
PCSK6-212ENST00000560785 NEUROD6Q96NK8 337 aa15.14■□□□□ 0.01
PCSK6-212ENST00000560785 NBPF3Q9H094 633 aa15.14■□□□□ 0.01
PCSK6-212ENST00000560785 RAI14Q9P0K7 980 aa15.14■□□□□ 0.01
PCSK6-212ENST00000560785 BAG3O95817 575 aa15.13■□□□□ 0.01
PCSK6-212ENST00000560785 GNAI2P04899 355 aa15.13■□□□□ 0.01
PCSK6-212ENST00000560785 TRIM27P14373 513 aa15.13■□□□□ 0.01
PCSK6-212ENST00000560785 MTMR2Q13614 643 aa15.13■□□□□ 0.01
PCSK6-212ENST00000560785 FOXP4Q8IVH2 680 aaPredicted RBP15.13■□□□□ 0.01
PCSK6-212ENST00000560785 TRMT44Q8IYL2 757 aaKnown RBP15.13■□□□□ 0.01
PCSK6-212ENST00000560785 GTF3C2Q8WUA4 911 aaPredicted RBP15.13■□□□□ 0.01
PCSK6-212ENST00000560785 USP6NLQ92738 828 aa15.13■□□□□ 0.01
PCSK6-212ENST00000560785 STAP2Q9UGK3 403 aa15.13■□□□□ 0.01
PCSK6-212ENST00000560785 FLT1P17948 1338 aa15.13■□□□□ 0.01
PCSK6-212ENST00000560785 CUL9Q8IWT3 2517 aa15.12■□□□□ 0.01
PCSK6-212ENST00000560785 PNMA6EA0A0J9YXQ4 647 aa15.12■□□□□ 0.01
PCSK6-212ENST00000560785 COL6A1P12109 1028 aa15.12■□□□□ 0.01
PCSK6-212ENST00000560785 IRX3P78415 501 aaPredicted RBP15.12■□□□□ 0.01
PCSK6-212ENST00000560785 LRIT3Q3SXY7 679 aa15.12■□□□□ 0.01
PCSK6-212ENST00000560785 GORABQ5T7V8 394 aa15.12■□□□□ 0.01
PCSK6-212ENST00000560785 LRP2BPQ9P2M1 347 aa15.12■□□□□ 0.01
PCSK6-212ENST00000560785 TAOK2Q9UL54 1235 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms