RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 NOB1Q9ULX3 412 aaKnown RBP14.89□□□□□ -0.03
MARK3-221ENST00000560603 PTPRFP10586 1907 aa14.89□□□□□ -0.03
MARK3-221ENST00000560603 LAMA3Q16787 3333 aa14.89□□□□□ -0.03
MARK3-221ENST00000560603 HMGCRP04035 888 aa14.88□□□□□ -0.03
MARK3-221ENST00000560603 GNAI3P08754 354 aa14.88□□□□□ -0.03
MARK3-221ENST00000560603 RHBDL3P58872 404 aa14.88□□□□□ -0.03
MARK3-221ENST00000560603 SPP2Q13103 211 aa14.88□□□□□ -0.03
MARK3-221ENST00000560603 TREML2Q5T2D2 321 aa14.88□□□□□ -0.03
MARK3-221ENST00000560603 PAWRQ96IZ0 340 aaKnown RBP14.88□□□□□ -0.03
MARK3-221ENST00000560603 NOL10Q9BSC4 688 aaKnown RBP14.88□□□□□ -0.03
MARK3-221ENST00000560603 AS3MTQ9HBK9 375 aa14.88□□□□□ -0.03
MARK3-221ENST00000560603 DOCK3Q8IZD9 2030 aa14.88□□□□□ -0.03
MARK3-221ENST00000560603 USP17L5A8MUK1 530 aa14.87□□□□□ -0.03
MARK3-221ENST00000560603 CCDC84Q86UT8 332 aaPredicted RBP14.87□□□□□ -0.03
MARK3-221ENST00000560603 SLC17A8Q8NDX2 589 aa14.87□□□□□ -0.03
MARK3-221ENST00000560603 NEUROD6Q96NK8 337 aa14.87□□□□□ -0.03
MARK3-221ENST00000560603 HMX1Q9NP08 348 aaPredicted RBP14.87□□□□□ -0.03
MARK3-221ENST00000560603 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
MARK3-221ENST00000560603 COL2A1P02458 1487 aaPredicted RBP14.87□□□□□ -0.03
MARK3-221ENST00000560603 PHIPQ8WWQ0 1821 aa14.87□□□□□ -0.03
MARK3-221ENST00000560603 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 SLURP2P0DP57 97 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 CAP2P40123 477 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 HMGCS2P54868 508 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 TFCP2Q12800 502 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 TEX11Q8IYF3 940 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 MEIS3Q99687 375 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 RAI14Q9P0K7 980 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 HMG20BQ9P0W2 317 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 STAP2Q9UGK3 403 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 RPTORQ8N122 1335 aa14.86□□□□□ -0.03
MARK3-221ENST00000560603 FAM196BA6NMK8 535 aa14.85□□□□□ -0.03
MARK3-221ENST00000560603 IRX3P78415 501 aaPredicted RBP14.85□□□□□ -0.03
MARK3-221ENST00000560603 SH3D19Q5HYK7 790 aa14.85□□□□□ -0.03
MARK3-221ENST00000560603 SPATA5Q8NB90 893 aa14.85□□□□□ -0.03
MARK3-221ENST00000560603 NSUN4Q96CB9 384 aaKnown RBP14.85□□□□□ -0.03
MARK3-221ENST00000560603 NBPF3Q9H094 633 aa14.85□□□□□ -0.03
MARK3-221ENST00000560603 ASCC2Q9H1I8 757 aaPredicted RBP14.85□□□□□ -0.03
MARK3-221ENST00000560603 DHX36Q9H2U1 1008 aaKnown RBP14.85□□□□□ -0.03
MARK3-221ENST00000560603 TMOD4Q9NZQ9 345 aa14.85□□□□□ -0.03
MARK3-221ENST00000560603 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.85□□□□□ -0.03
MARK3-221ENST00000560603 COL6A3P12111 3177 aa14.85□□□□□ -0.03
MARK3-221ENST00000560603 BAG3O95817 575 aa14.84□□□□□ -0.03
MARK3-221ENST00000560603 PLCG2P16885 1265 aa14.84□□□□□ -0.03
MARK3-221ENST00000560603 BMP8BP34820 402 aa14.84□□□□□ -0.03
MARK3-221ENST00000560603 MTX1Q13505 466 aa14.84□□□□□ -0.03
MARK3-221ENST00000560603 TRMT2AQ8IZ69 625 aaKnown RBP14.84□□□□□ -0.03
MARK3-221ENST00000560603 CDCA7LQ96GN5 454 aa14.84□□□□□ -0.03
MARK3-221ENST00000560603 LRP2BPQ9P2M1 347 aa14.84□□□□□ -0.03
MARK3-221ENST00000560603 PI4KBQ9UBF8 816 aa14.84□□□□□ -0.03
MARK3-221ENST00000560603 MORF4L1Q9UBU8 362 aa14.84□□□□□ -0.03
MARK3-221ENST00000560603 GJD2Q9UKL4 321 aa14.84□□□□□ -0.03
MARK3-221ENST00000560603 ASNSP08243 561 aa14.83□□□□□ -0.04
MARK3-221ENST00000560603 UQCRFS1P1P0C7P4 283 aa14.83□□□□□ -0.04
MARK3-221ENST00000560603 G3BP1Q13283 466 aaKnown RBP eCLIP14.83□□□□□ -0.04
MARK3-221ENST00000560603 TRMT44Q8IYL2 757 aaKnown RBP14.83□□□□□ -0.04
MARK3-221ENST00000560603 C7orf61Q8IZ16 206 aa14.83□□□□□ -0.04
MARK3-221ENST00000560603 DIS3LQ8TF46 1054 aaKnown RBP14.83□□□□□ -0.04
MARK3-221ENST00000560603 ZNF384Q8TF68 577 aa14.83□□□□□ -0.04
MARK3-221ENST00000560603 SOCS4Q8WXH5 440 aa14.83□□□□□ -0.04
MARK3-221ENST00000560603 ARHGAP45Q92619 1136 aa14.83□□□□□ -0.04
MARK3-221ENST00000560603 WDR18Q9BV38 432 aa14.83□□□□□ -0.04
MARK3-221ENST00000560603 TRIM34Q9BYJ4 488 aa14.83□□□□□ -0.04
MARK3-221ENST00000560603 DLL1O00548 723 aa14.82□□□□□ -0.04
MARK3-221ENST00000560603 ARID4AP29374 1257 aaPredicted RBP14.82□□□□□ -0.04
MARK3-221ENST00000560603 PDE3AQ14432 1141 aa14.82□□□□□ -0.04
MARK3-221ENST00000560603 GPR153Q6NV75 609 aa14.82□□□□□ -0.04
MARK3-221ENST00000560603 TBC1D9Q6ZT07 1266 aa14.82□□□□□ -0.04
MARK3-221ENST00000560603 CCAR1Q8IX12 1150 aaKnown RBP14.82□□□□□ -0.04
MARK3-221ENST00000560603 GDF15Q99988 308 aa14.82□□□□□ -0.04
MARK3-221ENST00000560603 NUDT12Q9BQG2 462 aa14.82□□□□□ -0.04
MARK3-221ENST00000560603 C11orf49Q9H6J7 331 aa14.82□□□□□ -0.04
MARK3-221ENST00000560603 GINM1Q9NU53 330 aa14.82□□□□□ -0.04
MARK3-221ENST00000560603 LOC285556D6RIA3 1793 aa14.82□□□□□ -0.04
MARK3-221ENST00000560603 C19orf81C9J6K1 198 aa14.81□□□□□ -0.04
MARK3-221ENST00000560603 XRCC5P13010 732 aaKnown RBP14.81□□□□□ -0.04
MARK3-221ENST00000560603 HOXA7P31268 230 aaPredicted RBP14.81□□□□□ -0.04
MARK3-221ENST00000560603 BACE1P56817 501 aa14.81□□□□□ -0.04
MARK3-221ENST00000560603 MTMR2Q13614 643 aa14.81□□□□□ -0.04
MARK3-221ENST00000560603 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
MARK3-221ENST00000560603 GPRC5AQ8NFJ5 357 aa14.81□□□□□ -0.04
MARK3-221ENST00000560603 GTF3C2Q8WUA4 911 aaPredicted RBP14.81□□□□□ -0.04
MARK3-221ENST00000560603 LRCH3Q96II8 777 aa14.81□□□□□ -0.04
MARK3-221ENST00000560603 ZMYND8Q9ULU4 1186 aaPredicted RBP14.81□□□□□ -0.04
MARK3-221ENST00000560603 SOX1O00570 391 aaPredicted RBP14.8□□□□□ -0.04
MARK3-221ENST00000560603 IPO8O15397 1037 aaKnown RBP14.8□□□□□ -0.04
MARK3-221ENST00000560603 IGSF3O75054 1194 aa14.8□□□□□ -0.04
MARK3-221ENST00000560603 GNAI2P04899 355 aa14.8□□□□□ -0.04
MARK3-221ENST00000560603 CYP2B6P20813 491 aa14.8□□□□□ -0.04
MARK3-221ENST00000560603 MAPK4P31152 587 aa14.8□□□□□ -0.04
MARK3-221ENST00000560603 RARSP54136 660 aaKnown RBP14.8□□□□□ -0.04
MARK3-221ENST00000560603 NAA16Q6N069 864 aaPredicted RBP14.8□□□□□ -0.04
MARK3-221ENST00000560603 PI16Q6UXB8 463 aa14.8□□□□□ -0.04
MARK3-221ENST00000560603 ATF7IPQ6VMQ6 1270 aa14.8□□□□□ -0.04
MARK3-221ENST00000560603 FOXP4Q8IVH2 680 aaPredicted RBP14.8□□□□□ -0.04
MARK3-221ENST00000560603 SH3RF3Q8TEJ3 882 aaPredicted RBP14.8□□□□□ -0.04
MARK3-221ENST00000560603 P2RX7Q99572 595 aaKnown RBP14.8□□□□□ -0.04
MARK3-221ENST00000560603 OGDHLQ9ULD0 1010 aa14.8□□□□□ -0.04
MARK3-221ENST00000560603 ATAD5Q96QE3 1844 aa14.8□□□□□ -0.04
MARK3-221ENST00000560603 USP17L10C9JJH3 530 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms