RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PDLIM7Q9NR12 457 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 FAM86C1Q9NVL1 165 aa8.55□□□□□ -1.04
HERC1-208ENST00000560462 ATRNL1Q5VV63 1379 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 MED23Q9ULK4 1368 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 GRXCR1A8MXD5 290 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 MS4A1P11836 297 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 ATP2B4P23634 1241 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 TCF15Q12870 199 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 MOGSQ13724 837 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 ST3GAL2Q16842 350 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 CFAP100Q494V2 611 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 SH3RF1Q7Z6J0 888 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 COA1Q9GZY4 146 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 SLC28A3Q9HAS3 691 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 MSRAQ9UJ68 235 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 FASNP49327 2511 aaKnown RBP8.54□□□□□ -1.04
HERC1-208ENST00000560462 AOX1Q06278 1338 aa8.54□□□□□ -1.04
HERC1-208ENST00000560462 ECM29Q5VYK3 1845 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 FPGSQ05932 587 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 RAB30Q15771 203 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 IER5LQ5T953 404 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 GPAT2Q6NUI2 795 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 FAM178BQ8IXR5 827 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 SMCR8Q8TEV9 937 aaPredicted RBP8.53□□□□□ -1.04
HERC1-208ENST00000560462 DDX12PQ92771 950 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 OCEL1Q9H607 264 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 RALYQ9UKM9 306 aaKnown RBP8.53□□□□□ -1.04
HERC1-208ENST00000560462 MYO15AQ9UKN7 3530 aa8.53□□□□□ -1.04
HERC1-208ENST00000560462 MYO9BQ13459 2157 aa8.52□□□□□ -1.04
HERC1-208ENST00000560462 POTEB3A0JP26 581 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 CLCN1P35523 988 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 GTF2IP78347 998 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 IRX5P78411 483 aaPredicted RBP8.52□□□□□ -1.05
HERC1-208ENST00000560462 MCM6Q14566 821 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 TRIM60Q495X7 471 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 HSP90AB3PQ58FF7 597 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 POTEBQ6S5H4 581 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 DGLUCYQ7Z3D6 616 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 CLUAP1Q96AJ1 413 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 TMEM39BQ9GZU3 492 aa8.52□□□□□ -1.05
HERC1-208ENST00000560462 GPR179Q6PRD1 2367 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 TRIOO75962 3097 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 RPAP1Q9BWH6 1393 aaPredicted RBP8.51□□□□□ -1.05
HERC1-208ENST00000560462 SOWAHBA6NEL2 793 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 DNM1LO00429 736 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 CCND3P30281 292 aaPredicted RBP8.51□□□□□ -1.05
HERC1-208ENST00000560462 RBM5P52756 815 aaKnown RBP eCLIP8.51□□□□□ -1.05
HERC1-208ENST00000560462 CACNB2Q08289 660 aaPredicted RBP8.51□□□□□ -1.05
HERC1-208ENST00000560462 SLC39A5Q6ZMH5 540 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 ASCL5Q7RTU5 278 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 CCDC82Q8N4S0 544 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 ANKRD13CQ8N6S4 541 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 ATOH1Q92858 354 aaPredicted RBP8.51□□□□□ -1.05
HERC1-208ENST00000560462 DCBLD2Q96PD2 775 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 IRF2BPLQ9H1B7 796 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 NKX2-4Q9H2Z4 354 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 GJD2Q9UKL4 321 aa8.51□□□□□ -1.05
HERC1-208ENST00000560462 F8W031 263 aaPredicted RBP8.5□□□□□ -1.05
HERC1-208ENST00000560462 MAST4O15021 2626 aa8.5□□□□□ -1.05
HERC1-208ENST00000560462 RAG1P15918 1043 aa8.5□□□□□ -1.05
HERC1-208ENST00000560462 TNNI2P48788 182 aa8.5□□□□□ -1.05
HERC1-208ENST00000560462 RIF1Q5UIP0 2472 aaKnown RBP8.5□□□□□ -1.05
HERC1-208ENST00000560462 ZNF428Q96B54 188 aa8.5□□□□□ -1.05
HERC1-208ENST00000560462 FAM89AQ96GI7 184 aa8.5□□□□□ -1.05
HERC1-208ENST00000560462 SEC31BQ9NQW1 1179 aa8.5□□□□□ -1.05
HERC1-208ENST00000560462 BSDC1Q9NW68 430 aaPredicted RBP8.5□□□□□ -1.05
HERC1-208ENST00000560462 ZNF70Q9UC06 446 aaPredicted RBP8.5□□□□□ -1.05
HERC1-208ENST00000560462 MTCH2Q9Y6C9 303 aa8.5□□□□□ -1.05
HERC1-208ENST00000560462 DMXL1Q9Y485 3027 aa8.5□□□□□ -1.05
HERC1-208ENST00000560462 PLXNA1Q9UIW2 1896 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 TCP10L2B9ZVM9 353 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 PROB1E7EW31 1015 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 ZKSCAN1P17029 563 aaPredicted RBP8.49□□□□□ -1.05
HERC1-208ENST00000560462 POU3F3P20264 500 aaPredicted RBP8.49□□□□□ -1.05
HERC1-208ENST00000560462 CYP2B6P20813 491 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 FAM110CQ1W6H9 321 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 FASTKD5Q7L8L6 764 aaKnown RBP8.49□□□□□ -1.05
HERC1-208ENST00000560462 TRMT44Q8IYL2 757 aaKnown RBP8.49□□□□□ -1.05
HERC1-208ENST00000560462 CERS5Q8N5B7 392 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.49□□□□□ -1.05
HERC1-208ENST00000560462 REPIN1Q9BWE0 567 aaKnown RBP8.49□□□□□ -1.05
HERC1-208ENST00000560462 GPCPD1Q9NPB8 672 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 DACH1Q9UI36 760 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 SLC45A1Q9Y2W3 748 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 TACC3Q9Y6A5 838 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 MYBBP1AQ9BQG0 1328 aaKnown RBP8.49□□□□□ -1.05
HERC1-208ENST00000560462 DNAH14Q0VDD8 3507 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 A0A0G2JMZ2 1700 aa8.49□□□□□ -1.05
HERC1-208ENST00000560462 PRR23AA6NEV1 266 aa8.48□□□□□ -1.05
HERC1-208ENST00000560462 CXCL11O14625 94 aa8.48□□□□□ -1.05
HERC1-208ENST00000560462 XRCC5P13010 732 aaKnown RBP8.48□□□□□ -1.05
HERC1-208ENST00000560462 NEUROD1Q13562 356 aa8.48□□□□□ -1.05
HERC1-208ENST00000560462 SNX17Q15036 470 aa8.48□□□□□ -1.05
HERC1-208ENST00000560462 PKN1Q16512 942 aa8.48□□□□□ -1.05
HERC1-208ENST00000560462 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
HERC1-208ENST00000560462 HOOK2Q96ED9 719 aa8.48□□□□□ -1.05
HERC1-208ENST00000560462 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
HERC1-208ENST00000560462 TDRD3Q9H7E2 651 aaKnown RBP8.48□□□□□ -1.05
HERC1-208ENST00000560462 WDR87Q6ZQQ6 2873 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms