RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 KCNA3P22001 575 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 CEBPZQ03701 1054 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 TBC1D22AQ8WUA7 517 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 EYA3Q99504 573 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 LLPHQ9BRT6 129 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 FAM217BQ9NTX9 383 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 TIAM2Q8IVF5 1701 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 POLR3DP05423 398 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 CACNB3P54284 484 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 RHBDL3P58872 404 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 ENAHQ8N8S7 591 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 ORC3Q9UBD5 711 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 ARPP21Q9UBL0 812 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 ADAMTSL1Q8N6G6 1762 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 SCN9AQ15858 1988 aa12.73□□□□□ -0.37
SNRPA1-211ENST00000560433 SART3Q15020 963 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 C12orf60Q5U649 245 aa12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 GIMAP6Q6P9H5 292 aa12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 TTLL6Q8N841 843 aa12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 FTOQ9C0B1 505 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 MTMR7Q9Y216 660 aa12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 TSPY2A6NKD2 308 aa12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 PPIP5K2O43314 1243 aa12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 LIFRP42702 1097 aa12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 PPP4CP60510 307 aa12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 SGMS1Q86VZ5 419 aa12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 ZSCAN10Q96SZ4 725 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-211ENST00000560433 FLT1P17948 1338 aa12.71□□□□□ -0.37
SNRPA1-211ENST00000560433 hCG_1642624A0A1W2PR95 340 aa12.71□□□□□ -0.37
SNRPA1-211ENST00000560433 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.376e-6■□□□□ 9
SNRPA1-211ENST00000560433 HMGN5P82970 282 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-211ENST00000560433 SEC23AQ15436 765 aa12.71□□□□□ -0.37
SNRPA1-211ENST00000560433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNRPA1-211ENST00000560433 USP17L3A6NCW0 530 aa12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 USP17L4A6NCW7 530 aa12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 YDJCA8MPS7 323 aa12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 IFIT1BQ5T764 474 aaKnown RBP12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 PODNQ7Z5L7 613 aa12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 MKNK2Q9HBH9 465 aa12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 DDX4Q9NQI0 724 aaKnown RBP12.71□□□□□ -0.38
SNRPA1-211ENST00000560433 QSER1Q2KHR3 1735 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 KIAA1551Q9HCM1 1747 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 DHX16O60231 1041 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 TFAP4Q01664 338 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 NTRK3Q16288 839 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 SBK1Q52WX2 424 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 IQCA1Q86XH1 822 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 SLC26A6Q9BXS9 759 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 C10orf71Q711Q0 1435 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 BAZ2BQ9UIF8 2168 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 CDK5RAP2Q96SN8 1893 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 GAKO14976 1311 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 ZBTB22O15209 634 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 PDE4BQ07343 736 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 RESTQ13127 1097 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 SKOR2Q2VWA4 1001 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 USP40Q9NVE5 1235 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 ATP6V1DQ9Y5K8 247 aa12.7□□□□□ -0.38
SNRPA1-211ENST00000560433 RAD17O75943 681 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 FGRP09769 529 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 NFIAQ12857 509 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 TTC6Q86TZ1 520 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 CCDC125Q86Z20 511 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 PIBF1Q8WXW3 757 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 IL17RBQ9NRM6 502 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 TMEM63CQ9P1W3 806 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 KIAA2012Q0VF49 1180 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 TCP10Q12799 353 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 RTN1Q16799 776 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 DACT2Q5SW24 774 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 APOBEC3HQ6NTF7 200 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 GAS2L3Q86XJ1 694 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 FANCBQ8NB91 859 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 SLC16A10Q8TF71 515 aa12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-211ENST00000560433 LAMB1P07942 1786 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 WDHD1O75717 1129 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 IARSP41252 1262 aaKnown RBP12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 CRKP46108 304 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 CDC42EP5Q6NZY7 148 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 RASGRP2Q7LDG7 609 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 ALG1Q9BT22 464 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 ORC4O43929 436 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 PLEKHA8P1O95397 391 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 KRT85P78386 507 aa12.68□□□□□ -0.38
SNRPA1-211ENST00000560433 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms