RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 ENPP3O14638 875 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 ATXN7O15265 892 aaPredicted RBP6.47□□□□□ -1.37
TPM1-222ENST00000560131 EFSO43281 561 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 PLIN1O60240 522 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 OFD1O75665 1012 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 CELA3AP09093 270 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 ITPKAP23677 461 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 MAP2K3P46734 347 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 RPS26P62854 115 aaKnown RBP6.47□□□□□ -1.37
TPM1-222ENST00000560131 APOBRQ0VD83 1088 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 LAMC2Q13753 1193 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 PTPROQ16827 1216 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 TTBK2Q6IQ55 1244 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 SMAP1Q8IYB5 467 aaPredicted RBP6.47□□□□□ -1.37
TPM1-222ENST00000560131 CEP120Q8N960 986 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 NECAB3Q96P71 396 aaPredicted RBP6.47□□□□□ -1.37
TPM1-222ENST00000560131 PNMA5Q96PV4 448 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 PCDHGC4Q9Y5F7 938 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 RTEL1-TNFRSF6BF6WH68 1400 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 TROQ12816 1431 aaPredicted RBP6.47□□□□□ -1.37
TPM1-222ENST00000560131 ANKRD50Q9ULJ7 1429 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 SYNJ2O15056 1496 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 ATP10AO60312 1499 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 RAPGEF6Q8TEU7 1601 aa6.47□□□□□ -1.37
TPM1-222ENST00000560131 PLEKHH1Q9ULM0 1364 aa6.46□□□□□ -1.37
TPM1-222ENST00000560131 PBRM1Q86U86 1689 aa6.46□□□□□ -1.37
TPM1-222ENST00000560131 PIK3R2O00459 728 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 MAP3K6O95382 1288 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 HOXD8P13378 290 aaPredicted RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 IBSPP21815 317 aaPredicted RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 DDIT3P35638 169 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 GRIA4P48058 902 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 IGBP1P78318 339 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 PLAURQ03405 335 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 CCDC173Q0VFZ6 552 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 RPS26P11Q5JNZ5 115 aaPredicted RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 ARTNQ5T4W7 220 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 RNF187Q5TA31 235 aaPredicted RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 UTP14CQ5TAP6 766 aaKnown RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 COL13A1Q5TAT6 717 aaPredicted RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 C20orf194Q5TEA3 1177 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 FAM196AQ6ZSG2 479 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 NBPF11Q86T75 865 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 HNRNPLLQ8WVV9 542 aaKnown RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 KCNB2Q92953 911 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 GPATCH3Q96I76 525 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 RNPC3Q96LT9 517 aaKnown RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 BRINP2Q9C0B6 783 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 SEC31BQ9NQW1 1179 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 DZANK1Q9NVP4 752 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 YEATS2Q9ULM3 1422 aa6.46□□□□□ -1.38
TPM1-222ENST00000560131 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.46□□□□□ -1.38
TPM1-222ENST00000560131 CDC42BPAQ5VT25 1732 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 ADAMTS12P58397 1594 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 ERBINQ96RT1 1412 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 A0A096LPE4 126 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 A0A1W2PPZ6 126 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 ENC1O14682 589 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 KHNYNO15037 678 aaKnown RBP6.45□□□□□ -1.38
TPM1-222ENST00000560131 TFE3P19532 575 aaPredicted RBP6.45□□□□□ -1.38
TPM1-222ENST00000560131 NFKB1P19838 968 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 MCM5P33992 734 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 TNP2Q05952 138 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 SPRED3Q2MJR0 410 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 TNNI3KQ59H18 835 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 LINC00114Q6XXX2 140 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 CLEC17AQ6ZS10 378 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 CCDC84Q86UT8 332 aaPredicted RBP6.45□□□□□ -1.38
TPM1-222ENST00000560131 ZSCAN30Q86W11 494 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 TMEM102Q8N9M5 508 aaPredicted RBP6.45□□□□□ -1.38
TPM1-222ENST00000560131 SNX21Q969T3 373 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 NXPE3Q969Y0 559 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 SHDQ96IW2 340 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 DEPDC7Q96QD5 511 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 BHLHE41Q9C0J9 482 aaPredicted RBP6.45□□□□□ -1.38
TPM1-222ENST00000560131 CCDC113Q9H0I3 377 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 SNTG2Q9NY99 539 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 KIAA0556O60303 1618 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 NUP153P49790 1475 aaKnown RBP6.45□□□□□ -1.38
TPM1-222ENST00000560131 IQGAP1P46940 1657 aa6.45□□□□□ -1.38
TPM1-222ENST00000560131 GPATCH8Q9UKJ3 1502 aaKnown RBP6.45□□□□□ -1.38
TPM1-222ENST00000560131 KANK1Q14678 1352 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 UNC13BO14795 1591 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 TARBP1Q13395 1621 aaKnown RBP6.44□□□□□ -1.38
TPM1-222ENST00000560131 hCG_2014768A0A024R1R8 64 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 FAM221BA6H8Z2 402 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 NFKBIEO00221 500 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 TRPA1O75762 1119 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 ACPPP15309 386 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 CHRNA4P43681 627 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 CRKP46108 304 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 RASA3Q14644 834 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 FOXD4L6Q3SYB3 417 aaPredicted RBP6.44□□□□□ -1.38
TPM1-222ENST00000560131 FOXD4L3Q6VB84 417 aaPredicted RBP6.44□□□□□ -1.38
TPM1-222ENST00000560131 TRIM42Q8IWZ5 723 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 ZCRB1Q8TBF4 217 aaKnown RBP6.44□□□□□ -1.38
TPM1-222ENST00000560131 EDARADDQ8WWZ3 215 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 TRIM44Q96DX7 344 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms