RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, human

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-208	ENST00000559891	MYO1B	O43795	1136 aa		13.74	□□□□□ -0.21
TM2D3-208	ENST00000559891	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.74	□□□□□ -0.21
TM2D3-208	ENST00000559891	CHST3	Q7LGC8	479 aa		13.74	□□□□□ -0.21
TM2D3-208	ENST00000559891	KCNB2	Q92953	911 aa		13.74	□□□□□ -0.21
TM2D3-208	ENST00000559891	SNX21	Q969T3	373 aa		13.74	□□□□□ -0.21
TM2D3-208	ENST00000559891	DNAJC18	Q9H819	358 aa		13.74	□□□□□ -0.21
TM2D3-208	ENST00000559891	ADM5	C9JUS6	153 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	IMMT	Q16891	758 aa	Known RBP	13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	DEFB129	Q9H1M3	183 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	GOLGA6L3	A6NEY3	463 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	DDIT3	P35638	169 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	GIMAP6	Q6P9H5	292 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	MIGA2	Q7L4E1	593 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	SPRYD3	Q8NCJ5	442 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	TEPSIN	Q96N21	525 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	TMOD2	Q9NZR1	351 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	CTNNA3	Q9UI47	895 aa		13.73	□□□□□ -0.21
TM2D3-208	ENST00000559891	SCN4A	P35499	1836 aa		13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	ZMYM6	O95789	1325 aa		13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	SBK1	Q52WX2	424 aa		13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	RRP12	Q5JTH9	1297 aa	Known RBP	13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	JAKMIP1	Q96N16	626 aa	Known RBP	13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	LARP6	Q9BRS8	491 aa	Known RBP	13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891		B4E1Z4	1266 aa		13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	RRP1B	Q14684	758 aa	Known RBP	13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	MAP1S	Q66K74	1059 aa	Predicted RBP	13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	CERS3	Q8IU89	383 aa		13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	FAM151A	Q8WW52	585 aa		13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	CSRNP1	Q96S65	589 aa		13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	LRRC2	Q9BYS8	371 aa		13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	GPHN	Q9NQX3	736 aa	Predicted RBP	13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	LAMA4	Q16363	1823 aa		13.72	□□□□□ -0.21
TM2D3-208	ENST00000559891	LAMB1	P07942	1786 aa		13.71	□□□□□ -0.21
TM2D3-208	ENST00000559891	DDX11L8	A8MPP1	907 aa		13.71	□□□□□ -0.21
TM2D3-208	ENST00000559891	ENTPD3	O75355	529 aa		13.71	□□□□□ -0.21
TM2D3-208	ENST00000559891	CD2BP2	O95400	341 aa	Known RBP	13.71	□□□□□ -0.21
TM2D3-208	ENST00000559891	USP50	Q70EL3	339 aa	Predicted RBP	13.71	□□□□□ -0.21
TM2D3-208	ENST00000559891	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.71	□□□□□ -0.21
TM2D3-208	ENST00000559891	TOMM22	Q9NS69	142 aa		13.71	□□□□□ -0.21
TM2D3-208	ENST00000559891	ANAPC4	Q9UJX5	808 aa		13.71	□□□□□ -0.21
TM2D3-208	ENST00000559891	IQCA1L	A6NCM1	817 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	EPB41L2	O43491	1005 aa	Known RBP	13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	TRAK2	O60296	914 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	XRCC6	P12956	609 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	VEGFA	P15692	232 aa	Predicted RBP	13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	CAST	P20810	708 aa	Known RBP	13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	MCC	P23508	829 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	MMP14	P50281	582 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	JAG1	P78504	1218 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	FAM47A	Q5JRC9	791 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	AKNAD1	Q5T1N1	836 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	CYB5R4	Q7L1T6	521 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	NMT2	O60551	498 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	ZKSCAN1	P17029	563 aa	Predicted RBP	13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	CDK8	P49336	464 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	GABPA	Q06546	454 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	TSGA10IP	Q3SY00	556 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	RNF20	Q5VTR2	975 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	USP48	Q86UV5	1035 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	ZKSCAN3	Q9BRR0	538 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	CLEC11A	Q9Y240	323 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	ATRNL1	Q5VV63	1379 aa		13.7	□□□□□ -0.22
TM2D3-208	ENST00000559891	TRAF5	O00463	557 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	KDM4A	O75164	1064 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	ANTXR2	P58335	489 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	PRKG1	Q13976	671 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	FKBP1C	Q5VVH2	108 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	MFSD6	Q6ZSS7	791 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	FAM83A	Q86UY5	434 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	STAG1	Q8WVM7	1258 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	NEK1	Q96PY6	1258 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	FOXD4L1	Q9NU39	408 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	SHMT1	P34896	483 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	C16orf86	Q6ZW13	317 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	KRT26	Q7Z3Y9	468 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	TTC6	Q86TZ1	520 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	CLEC10A	Q8IUN9	316 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	DCPS	Q96C86	337 aa	Known RBP	13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	SENP2	Q9HC62	589 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	ZSWIM5	Q9P217	1185 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	PI4KB	Q9UBF8	816 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	SERPINB13	Q9UIV8	391 aa		13.69	□□□□□ -0.22
TM2D3-208	ENST00000559891	SSC5D	A1L4H1	1573 aa		13.68	□□□□□ -0.22
TM2D3-208	ENST00000559891	RASA1	P20936	1047 aa		13.68	□□□□□ -0.22
TM2D3-208	ENST00000559891	NOL8	Q76FK4	1167 aa	Known RBP	13.68	□□□□□ -0.22
TM2D3-208	ENST00000559891	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.68	□□□□□ -0.22
TM2D3-208	ENST00000559891	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.68	□□□□□ -0.22
TM2D3-208	ENST00000559891	ISY1	Q9ULR0	285 aa	Known RBP	13.68	□□□□□ -0.22
TM2D3-208	ENST00000559891	ROBO3	Q96MS0	1386 aa		13.68	□□□□□ -0.22
TM2D3-208	ENST00000559891	RANBP6	O60518	1105 aa	Known RBP	13.67	□□□□□ -0.22
TM2D3-208	ENST00000559891	DTNB	O60941	627 aa		13.67	□□□□□ -0.22
TM2D3-208	ENST00000559891	FGR	P09769	529 aa		13.67	□□□□□ -0.22
TM2D3-208	ENST00000559891	NEK4	P51957	841 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms