RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 MAP4K4O95819 1239 aaPredicted RBP23.11■■□□□ 1.29
CDC42BPB-206ENST00000559790 PRMT2P55345 433 aa23.11■■□□□ 1.29
CDC42BPB-206ENST00000559790 GSTO1P78417 241 aa23.11■■□□□ 1.29
CDC42BPB-206ENST00000559790 ARHGEF6Q15052 776 aa23.11■■□□□ 1.29
CDC42BPB-206ENST00000559790 SHROOM1Q2M3G4 852 aaPredicted RBP23.11■■□□□ 1.29
CDC42BPB-206ENST00000559790 TREML2Q5T2D2 321 aa23.11■■□□□ 1.29
CDC42BPB-206ENST00000559790 EAF2Q96CJ1 260 aaPredicted RBP23.11■■□□□ 1.29
CDC42BPB-206ENST00000559790 SLC45A1Q9Y2W3 748 aa23.11■■□□□ 1.29
CDC42BPB-206ENST00000559790 TRIOBPQ9H2D6 2365 aa23.11■■□□□ 1.29
CDC42BPB-206ENST00000559790 TRIM75PA6NK02 468 aa23.1■■□□□ 1.29
CDC42BPB-206ENST00000559790 MYCP01106 439 aaPredicted RBP23.1■■□□□ 1.29
CDC42BPB-206ENST00000559790 LDHCP07864 332 aa23.1■■□□□ 1.29
CDC42BPB-206ENST00000559790 ZAP70P43403 619 aa23.1■■□□□ 1.29
CDC42BPB-206ENST00000559790 KIF22Q14807 665 aa23.1■■□□□ 1.29
CDC42BPB-206ENST00000559790 CEP85Q6P2H3 762 aa23.1■■□□□ 1.29
CDC42BPB-206ENST00000559790 ITPRIPQ8IWB1 547 aa23.1■■□□□ 1.29
CDC42BPB-206ENST00000559790 GABRQQ9UN88 632 aa23.1■■□□□ 1.29
CDC42BPB-206ENST00000559790 SURF6O75683 361 aaKnown RBP23.09■■□□□ 1.29
CDC42BPB-206ENST00000559790 PRKCZQ05513 592 aa23.09■■□□□ 1.29
CDC42BPB-206ENST00000559790 GADL1Q6ZQY3 521 aa23.09■■□□□ 1.29
CDC42BPB-206ENST00000559790 TEX11Q8IYF3 940 aa23.09■■□□□ 1.29
CDC42BPB-206ENST00000559790 AATFQ9NY61 560 aaKnown RBP eCLIP23.09■■□□□ 1.29
CDC42BPB-206ENST00000559790 FLT1P17948 1338 aa23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 MYPNQ86TC9 1320 aa23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 FRMPD3Q5JV73 1810 aa23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 BAZ2AQ9UIF9 1905 aaKnown RBP23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 PPP4CP60510 307 aa23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 TTC39AQ5SRH9 613 aa23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 FASTKD5Q7L8L6 764 aaKnown RBP23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 PANK1Q8TE04 598 aa23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 LRP2BPQ9P2M1 347 aa23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 AGTPBP1Q9UPW5 1226 aa23.08■■□□□ 1.29
CDC42BPB-206ENST00000559790 CAP2P40123 477 aa23.07■■□□□ 1.28
CDC42BPB-206ENST00000559790 DIEXFQ68CQ4 756 aaKnown RBP23.07■■□□□ 1.28
CDC42BPB-206ENST00000559790 NBPF11Q86T75 865 aa23.07■■□□□ 1.28
CDC42BPB-206ENST00000559790 METTL16Q86W50 562 aaKnown RBP23.07■■□□□ 1.28
CDC42BPB-206ENST00000559790 NDUFB9Q9Y6M9 179 aa23.07■■□□□ 1.28
CDC42BPB-206ENST00000559790 PARP14Q460N5 1801 aa23.07■■□□□ 1.28
CDC42BPB-206ENST00000559790 NAA16Q6N069 864 aaPredicted RBP23.06■■□□□ 1.28
CDC42BPB-206ENST00000559790 UBE2Q1Q7Z7E8 422 aa23.06■■□□□ 1.28
CDC42BPB-206ENST00000559790 FTSJ3Q8IY81 847 aaKnown RBP23.06■■□□□ 1.28
CDC42BPB-206ENST00000559790 TMEM106CQ9BVX2 250 aa23.06■■□□□ 1.28
CDC42BPB-206ENST00000559790 CCDC8Q9H0W5 538 aaPredicted RBP23.06■■□□□ 1.28
CDC42BPB-206ENST00000559790 RLFQ13129 1914 aa23.06■■□□□ 1.28
CDC42BPB-206ENST00000559790 RANBP2P49792 3224 aaKnown RBP23.05■■□□□ 1.28
CDC42BPB-206ENST00000559790 FMNL1O95466 1100 aaPredicted RBP23.05■■□□□ 1.28
CDC42BPB-206ENST00000559790 GRK4P32298 578 aa23.05■■□□□ 1.28
CDC42BPB-206ENST00000559790 DYNLL1P63167 89 aaKnown RBP23.04■■□□□ 1.28
CDC42BPB-206ENST00000559790 SPP2Q13103 211 aa23.04■■□□□ 1.28
CDC42BPB-206ENST00000559790 OS9Q13438 667 aaPredicted RBP23.04■■□□□ 1.28
CDC42BPB-206ENST00000559790 MAPKAPK5Q8IW41 473 aa23.04■■□□□ 1.28
CDC42BPB-206ENST00000559790 PROCA1Q8NCQ7 364 aaPredicted RBP23.04■■□□□ 1.28
CDC42BPB-206ENST00000559790 ANTXR1Q9H6X2 564 aa23.04■■□□□ 1.28
CDC42BPB-206ENST00000559790 HERC5Q9UII4 1024 aaKnown RBP23.04■■□□□ 1.28
CDC42BPB-206ENST00000559790 EXOC6BQ9Y2D4 811 aa23.04■■□□□ 1.28
CDC42BPB-206ENST00000559790 HMGCS2P54868 508 aa23.03■■□□□ 1.28
CDC42BPB-206ENST00000559790 FCGRTP55899 365 aa23.03■■□□□ 1.28
CDC42BPB-206ENST00000559790 SLC4A8Q2Y0W8 1093 aa23.03■■□□□ 1.28
CDC42BPB-206ENST00000559790 SH3D19Q5HYK7 790 aa23.03■■□□□ 1.28
CDC42BPB-206ENST00000559790 CCDC158Q5M9N0 1113 aa23.03■■□□□ 1.28
CDC42BPB-206ENST00000559790 ZNF280CQ8ND82 737 aa23.03■■□□□ 1.28
CDC42BPB-206ENST00000559790 TGFBRAP1Q8WUH2 860 aa23.03■■□□□ 1.28
CDC42BPB-206ENST00000559790 PALD1Q9ULE6 856 aa23.02■■□□□ 1.28
CDC42BPB-206ENST00000559790 A0A0G2JMZ2 1700 aa23.02■■□□□ 1.28
CDC42BPB-206ENST00000559790 CCL5P13501 91 aa23.01■■□□□ 1.27
CDC42BPB-206ENST00000559790 SIRT2Q8IXJ6 389 aa23.01■■□□□ 1.27
CDC42BPB-206ENST00000559790 RAET1EQ8TD07 263 aa23.01■■□□□ 1.27
CDC42BPB-206ENST00000559790 PI4KBQ9UBF8 816 aa23.01■■□□□ 1.27
CDC42BPB-206ENST00000559790 FLT3LGP49771 235 aa23■■□□□ 1.27
CDC42BPB-206ENST00000559790 FAM110CQ1W6H9 321 aa23■■□□□ 1.27
CDC42BPB-206ENST00000559790 POTEEQ6S8J3 1075 aa23■■□□□ 1.27
CDC42BPB-206ENST00000559790 ANKRD13CQ8N6S4 541 aa23■■□□□ 1.27
CDC42BPB-206ENST00000559790 WDR18Q9BV38 432 aa23■■□□□ 1.27
CDC42BPB-206ENST00000559790 DHX36Q9H2U1 1008 aaKnown RBP23■■□□□ 1.27
CDC42BPB-206ENST00000559790 USP17L5A8MUK1 530 aa22.99■■□□□ 1.27
CDC42BPB-206ENST00000559790 ELNP15502 786 aa22.99■■□□□ 1.27
CDC42BPB-206ENST00000559790 PLCG2P16885 1265 aa22.99■■□□□ 1.27
CDC42BPB-206ENST00000559790 HOXD10P28358 340 aa22.99■■□□□ 1.27
CDC42BPB-206ENST00000559790 SMCR8Q8TEV9 937 aaPredicted RBP22.99■■□□□ 1.27
CDC42BPB-206ENST00000559790 UNC93B1Q9H1C4 597 aa22.99■■□□□ 1.27
CDC42BPB-206ENST00000559790 ASCC2Q9H1I8 757 aaPredicted RBP22.99■■□□□ 1.27
CDC42BPB-206ENST00000559790 PEX10O60683 326 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 IGSF3O75054 1194 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 BAG3O95817 575 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 GJB1P08034 283 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 CYP7A1P22680 504 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 GJA8P48165 433 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 IRF5Q13568 498 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 MTMR2Q13614 643 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 HABP4Q5JVS0 413 aaKnown RBP22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 SLAIN1Q8ND83 568 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 TBC1D2Q9BYX2 928 aa22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 SAP30BPQ9UHR5 308 aaKnown RBP22.98■■□□□ 1.27
CDC42BPB-206ENST00000559790 GDF11O95390 407 aa22.97■■□□□ 1.27
CDC42BPB-206ENST00000559790 MIGA1Q8NAN2 632 aa22.97■■□□□ 1.27
CDC42BPB-206ENST00000559790 ZBTB21Q9ULJ3 1066 aa22.97■■□□□ 1.27
CDC42BPB-206ENST00000559790 TNPO2O14787 897 aaKnown RBP22.96■■□□□ 1.27
CDC42BPB-206ENST00000559790 ADCY3O60266 1144 aa22.96■■□□□ 1.27
CDC42BPB-206ENST00000559790 IDH1O75874 414 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms