RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 ANO2Q9NQ90 1003 aa10.34□□□□□ -0.75
LRRC28-215ENST00000559774 AK9Q5TCS8 1911 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 IREB2P48200 963 aaKnown RBP10.33□□□□□ -0.76
LRRC28-215ENST00000559774 PLCD1P51178 756 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 PTH1RQ03431 593 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 PDE4BQ07343 736 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 PPARAQ07869 468 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 NECTIN1Q15223 517 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 TSGA10IPQ3SY00 556 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 NBPF12Q5TAG4 269 aaPredicted RBP10.33□□□□□ -0.76
LRRC28-215ENST00000559774 C16orf86Q6ZW13 317 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 CCDC17Q96LX7 622 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 ZNF341Q9BYN7 854 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 RNF41Q9H4P4 317 aaPredicted RBP10.33□□□□□ -0.76
LRRC28-215ENST00000559774 ZNF112Q9UJU3 913 aa10.33□□□□□ -0.76
LRRC28-215ENST00000559774 ZKSCAN1P17029 563 aaPredicted RBP10.32□□□□□ -0.76
LRRC28-215ENST00000559774 TATDN1Q6P1N9 297 aa10.32□□□□□ -0.76
LRRC28-215ENST00000559774 ARMC9Q7Z3E5 817 aa10.32□□□□□ -0.76
LRRC28-215ENST00000559774 CRACR2BQ8N4Y2 399 aaPredicted RBP10.32□□□□□ -0.76
LRRC28-215ENST00000559774 C2orf69Q8N8R5 385 aa10.32□□□□□ -0.76
LRRC28-215ENST00000559774 IL27Q8NEV9 243 aa10.32□□□□□ -0.76
LRRC28-215ENST00000559774 STAG1Q8WVM7 1258 aa10.32□□□□□ -0.76
LRRC28-215ENST00000559774 KCNB2Q92953 911 aa10.32□□□□□ -0.76
LRRC28-215ENST00000559774 KLRG1Q96E93 195 aa10.32□□□□□ -0.76
LRRC28-215ENST00000559774 USP26Q9BXU7 913 aa10.32□□□□□ -0.76
LRRC28-215ENST00000559774 CNNM2Q9H8M5 875 aa10.32□□□□□ -0.76
LRRC28-215ENST00000559774 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.32□□□□□ -0.76
LRRC28-215ENST00000559774 SAP30BPQ9UHR5 308 aaKnown RBP10.32□□□□□ -0.76
LRRC28-215ENST00000559774 RBM8AQ9Y5S9 174 aaKnown RBP10.32□□□□□ -0.76
LRRC28-215ENST00000559774 PHF20L1A8MW92 1017 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 MINDY4BA8MYZ0 360 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 ORC4O43929 436 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 CTNND1O60716 968 aaKnown RBP10.31□□□□□ -0.76
LRRC28-215ENST00000559774 USP2O75604 605 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-215ENST00000559774 MCCP23508 829 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 HOXD11P31277 338 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-215ENST00000559774 CDK8P49336 464 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 KRT32Q14532 448 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 PPP4R3BQ5MIZ7 849 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 AKNAD1Q5T1N1 836 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 LDLRAD1Q5T700 205 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 HHIPL1Q96JK4 782 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 TBC1D2Q9BYX2 928 aa10.31□□□□□ -0.76
LRRC28-215ENST00000559774 GBA2Q9HCG7 927 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-215ENST00000559774 FOCADQ5VW36 1801 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 DDX60LQ5H9U9 1706 aaKnown RBP10.3□□□□□ -0.76
LRRC28-215ENST00000559774 TRAF5O00463 557 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 CELF2O95319 508 aaKnown RBP10.3□□□□□ -0.76
LRRC28-215ENST00000559774 CYP21A2P08686 494 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 HSPA4P34932 840 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 ANAPC15P60006 121 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 MAP3K9P80192 1104 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 NOL9Q5SY16 702 aaKnown RBP10.3□□□□□ -0.76
LRRC28-215ENST00000559774 PRAMEF18Q5VWM3 479 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 CST9Q5W186 159 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 MFSD6Q6ZSS7 791 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 ANKRD13AQ8IZ07 590 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.3□□□□□ -0.76
LRRC28-215ENST00000559774 IL17RAQ96F46 866 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 BACH2Q9BYV9 841 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 KRT23Q9C075 422 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 UPF2Q9HAU5 1272 aaKnown RBP10.3□□□□□ -0.76
LRRC28-215ENST00000559774 MKNK2Q9HBH9 465 aa10.3□□□□□ -0.76
LRRC28-215ENST00000559774 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.3□□□□□ -0.76
LRRC28-215ENST00000559774 TMEM88BA6NKF7 163 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 SLC27A2O14975 620 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 ASNSP08243 561 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 HMGB1P09429 215 aaKnown RBP10.29□□□□□ -0.76
LRRC28-215ENST00000559774 CYP2D6P10635 497 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 SHMT1P34896 483 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 CAP2P40123 477 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 APLP1P51693 650 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 TRDNQ13061 729 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 CERKLQ49MI3 558 aaPredicted RBP10.29□□□□□ -0.76
LRRC28-215ENST00000559774 CCDC178Q5BJE1 867 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 CREB3L3Q68CJ9 461 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 MIGA2Q7L4E1 593 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 CDAN1Q8IWY9 1227 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 ZNF444Q8N0Y2 327 aaPredicted RBP10.29□□□□□ -0.76
LRRC28-215ENST00000559774 ESR2Q92731 530 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 MTA3Q9BTC8 594 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 DNAJC18Q9H819 358 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 CABP5Q9NP86 173 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 TCP11L1Q9NUJ3 509 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 SYNPO2Q9UMS6 1093 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 SCAF8Q9UPN6 1271 aaKnown RBP10.29□□□□□ -0.76
LRRC28-215ENST00000559774 CSADQ9Y600 493 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 SSC5DA1L4H1 1573 aa10.29□□□□□ -0.76
LRRC28-215ENST00000559774 CYP2D7A0A087X1C5 515 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 RASA1P20936 1047 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 PSMA5P28066 241 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 TMEM179Q6ZVK1 233 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 SAPCD2Q86UD0 394 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 SCYL3Q8IZE3 742 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 NCOA7Q8NI08 942 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 DYNLL2Q96FJ2 89 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 WRNIP1Q96S55 665 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 NBPF3Q9H094 633 aa10.28□□□□□ -0.76
LRRC28-215ENST00000559774 CREBZFQ9NS37 354 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms