RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 GRM8O00222 908 aa11.29□□□□□ -0.6
SNRPA1-208ENST00000559686 FAM109BQ6ICB4 259 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-208ENST00000559686 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
SNRPA1-208ENST00000559686 TRIB2Q92519 343 aa11.29□□□□□ -0.6
SNRPA1-208ENST00000559686 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-208ENST00000559686 OGDHLQ9ULD0 1010 aa11.29□□□□□ -0.6
SNRPA1-208ENST00000559686 MROH5Q6ZUA9 1318 aa11.29□□□□□ -0.6
SNRPA1-208ENST00000559686 PEX10O60683 326 aa11.28□□□□□ -0.6
SNRPA1-208ENST00000559686 BEND3Q5T5X7 828 aa11.28□□□□□ -0.6
SNRPA1-208ENST00000559686 SLC4A10Q6U841 1118 aa11.28□□□□□ -0.6
SNRPA1-208ENST00000559686 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
SNRPA1-208ENST00000559686 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-208ENST00000559686 AGTPBP1Q9UPW5 1226 aa11.28□□□□□ -0.6
SNRPA1-208ENST00000559686 COL2A1P02458 1487 aaPredicted RBP11.27□□□□□ -0.6
SNRPA1-208ENST00000559686 RGS3P49796 1198 aa11.27□□□□□ -0.61
SNRPA1-208ENST00000559686 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-208ENST00000559686 FAM110CQ1W6H9 321 aa11.27□□□□□ -0.61
SNRPA1-208ENST00000559686 KLHDC4Q8TBB5 520 aa11.27□□□□□ -0.61
SNRPA1-208ENST00000559686 MRIQ9BWK5 157 aa11.27□□□□□ -0.61
SNRPA1-208ENST00000559686 GJD2Q9UKL4 321 aa11.27□□□□□ -0.61
SNRPA1-208ENST00000559686 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
SNRPA1-208ENST00000559686 SLC45A1Q9Y2W3 748 aa11.27□□□□□ -0.61
SNRPA1-208ENST00000559686 MUC3AQ02505 3323 aa11.27□□□□□ -0.61
SNRPA1-208ENST00000559686 MAST2Q6P0Q8 1798 aa11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 FRMPD3Q5JV73 1810 aa11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 FAM196BA6NMK8 535 aa11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 FOSL2P15408 326 aa11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 PRDX5P30044 214 aa11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 CCND3P30281 292 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 PICALMQ13492 652 aa11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 SEMA6BQ9H3T3 888 aa11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 ATRNL1Q5VV63 1379 aa11.26□□□□□ -0.61
SNRPA1-208ENST00000559686 ATAD5Q96QE3 1844 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 TMEM265A0A087WTH1 108 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 PDE8BO95263 885 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 COL6A1P12109 1028 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 HMGCS2P54868 508 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 CACNB2Q08289 660 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 DDX10Q13206 875 aaKnown RBP11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 SHHQ15465 462 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 SH3BP5LQ7L8J4 393 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 WDR66Q8TBY9 1149 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 SENP6Q9GZR1 1112 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 LOC285556D6RIA3 1793 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 LTBP2Q14767 1821 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 MYH2Q9UKX2 1941 aa11.25□□□□□ -0.61
SNRPA1-208ENST00000559686 LDHBP07195 334 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 IFIT1P09914 478 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 ZKSCAN1P17029 563 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 GCLCP48506 637 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 SPP2Q13103 211 aa11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 CCL14Q16627 93 aa11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 C9orf50Q5SZB4 431 aa11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 ASCC2Q9H1I8 757 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 TTYH1Q9H313 450 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 BICC1Q9H694 974 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 PRKAG2Q9UGJ0 569 aa11.24□□□□□ -0.61
SNRPA1-208ENST00000559686 CACNA1FO60840 1977 aa11.23□□□□□ -0.61
SNRPA1-208ENST00000559686 TNFRSF10AO00220 468 aa11.23□□□□□ -0.61
SNRPA1-208ENST00000559686 CTNND1O60716 968 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-208ENST00000559686 MAP3K21Q5TCX8 1036 aa11.23□□□□□ -0.61
SNRPA1-208ENST00000559686 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
SNRPA1-208ENST00000559686 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
SNRPA1-208ENST00000559686 ATP11BQ9Y2G3 1177 aa11.23□□□□□ -0.61
SNRPA1-208ENST00000559686 NBPF7P0C2Y1 421 aaPredicted RBP11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 SLC5A1P13866 664 aa11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 CNGA1P29973 690 aa11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 RTP1P59025 263 aa11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 PUM3Q15397 648 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 CCAR1Q8IX12 1150 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 USP38Q8NB14 1042 aa11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 PROCA1Q8NCQ7 364 aaPredicted RBP11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 PPM1EQ8WY54 764 aa11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 FAM122AQ96E09 287 aa11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 NUDT12Q9BQG2 462 aa11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 CWC22Q9HCG8 908 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 SALL2Q9Y467 1007 aaPredicted RBP11.22□□□□□ -0.61
SNRPA1-208ENST00000559686 FANCIQ9NVI1 1328 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 ENTPD3O75355 529 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 VAMP4O75379 141 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 FGFR2P21802 821 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 IRX3P78415 501 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 EXOSC9Q06265 439 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 PABPC4Q13310 644 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 PDE3AQ14432 1141 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 TJAP1Q5JTD0 557 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 WWC1Q8IX03 1113 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 HOMEZQ8IX15 550 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 PAGR1Q9BTK6 254 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 DDX4Q9NQI0 724 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-208ENST00000559686 NDUFB9Q9Y6M9 179 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms