RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 GRAPQ13588 217 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
SPG11-217ENST00000559511 DLEC1Q9Y238 1755 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 MROH7-TTC4A0A0A0MT08 1334 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 WDHD1O75717 1129 aaPredicted RBP12.82□□□□□ -0.36
SPG11-217ENST00000559511 SERPINB2P05120 415 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 HIBADHP31937 336 aaKnown RBP12.82□□□□□ -0.36
SPG11-217ENST00000559511 SSRP1Q08945 709 aaKnown RBP12.82□□□□□ -0.36
SPG11-217ENST00000559511 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
SPG11-217ENST00000559511 TXNRD3Q86VQ6 643 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 C17orf53Q8N3J3 647 aaPredicted RBP12.82□□□□□ -0.36
SPG11-217ENST00000559511 PIBF1Q8WXW3 757 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 RNF41Q9H4P4 317 aaPredicted RBP12.82□□□□□ -0.36
SPG11-217ENST00000559511 ANAPC4Q9UJX5 808 aa12.82□□□□□ -0.36
SPG11-217ENST00000559511 LAMB1P07942 1786 aa12.81□□□□□ -0.36
SPG11-217ENST00000559511 CYP2D7A0A087X1C5 515 aa12.81□□□□□ -0.36
SPG11-217ENST00000559511 IFNAR1P17181 557 aa12.81□□□□□ -0.36
SPG11-217ENST00000559511 U2AF2P26368 475 aaKnown RBP eCLIP12.81□□□□□ -0.36
SPG11-217ENST00000559511 MARCKSP29966 332 aaPredicted RBP12.81□□□□□ -0.36
SPG11-217ENST00000559511 SLC39A14Q15043 492 aa12.81□□□□□ -0.36
SPG11-217ENST00000559511 RTN1Q16799 776 aa12.81□□□□□ -0.36
SPG11-217ENST00000559511 PLA2G4DQ86XP0 818 aa12.81□□□□□ -0.36
SPG11-217ENST00000559511 CMTR1Q8N1G2 835 aaKnown RBP12.81□□□□□ -0.36
SPG11-217ENST00000559511 MAP3K14Q99558 947 aa12.81□□□□□ -0.36
SPG11-217ENST00000559511 R3HCC1Q9Y3T6 440 aaKnown RBP12.81□□□□□ -0.36
SPG11-217ENST00000559511 PDS5AQ29RF7 1337 aaKnown RBP12.81□□□□□ -0.36
SPG11-217ENST00000559511 ZNF75DP51815 510 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 PTPAQ15257 358 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 CRY2Q49AN0 593 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 ZNF772Q68DY9 489 aaPredicted RBP12.8□□□□□ -0.36
SPG11-217ENST00000559511 NBPF11Q86T75 865 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 SDF4Q9BRK5 362 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 MTA3Q9BTC8 594 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
SPG11-217ENST00000559511 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 ERICH2A1L162 156 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 PFKFB1P16118 471 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 CMA1P23946 247 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 DDR1Q08345 913 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 GNL2Q13823 731 aaKnown RBP12.8□□□□□ -0.36
SPG11-217ENST00000559511 TRIM29Q14134 588 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 SEC23AQ15436 765 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 DHX40Q8IX18 779 aaKnown RBP12.8□□□□□ -0.36
SPG11-217ENST00000559511 ZNF654Q8IZM8 581 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 CCDC82Q8N4S0 544 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 NSUN4Q96CB9 384 aaKnown RBP12.8□□□□□ -0.36
SPG11-217ENST00000559511 UBAC1Q9BSL1 405 aa12.8□□□□□ -0.36
SPG11-217ENST00000559511 TNS1Q9HBL0 1735 aaKnown RBP12.79□□□□□ -0.36
SPG11-217ENST00000559511 TNKSO95271 1327 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 GOLGA6L6A8MZA4 724 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 ZNF202O95125 648 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 PTGS1P23219 599 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 ST5P78524 1137 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 MECOMQ03112 1051 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 NOLC1Q14978 699 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPG11-217ENST00000559511 NUP133Q8WUM0 1156 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 ESR2Q92731 530 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 RPGRQ92834 1020 aaKnown RBP12.79□□□□□ -0.36
SPG11-217ENST00000559511 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 BRIP1Q9BX63 1249 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 POLRMTO00411 1230 aaKnown RBP12.79□□□□□ -0.36
SPG11-217ENST00000559511 EVX2Q03828 476 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 TMTC2Q8N394 836 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 CRACR2BQ8N4Y2 399 aaPredicted RBP12.79□□□□□ -0.36
SPG11-217ENST00000559511 FANCBQ8NB91 859 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 ANKIB1Q9P2G1 1089 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 NRBP1Q9UHY1 535 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 KCNJ14Q9UNX9 436 aa12.79□□□□□ -0.36
SPG11-217ENST00000559511 XDHP47989 1333 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 CDK5RAP2Q96SN8 1893 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 LTBP1Q14766 1721 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 ZBTB22O15209 634 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 PPP6R2O75170 966 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 MMP1P03956 469 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 TPM3P06753 285 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 ZNF827Q17R98 1081 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 CTR9Q6PD62 1173 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 SHC4Q6S5L8 630 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 TRIM22Q8IYM9 498 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 ENAHQ8N8S7 591 aaPredicted RBP12.78□□□□□ -0.36
SPG11-217ENST00000559511 WASF1Q92558 559 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 KIAA1468Q9P260 1216 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 JAG2Q9Y219 1238 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 LEMD3Q9Y2U8 911 aa12.78□□□□□ -0.36
SPG11-217ENST00000559511 BTBD18B2RXH4 712 aa12.77□□□□□ -0.36
SPG11-217ENST00000559511 GOLGA6L19H0YKK7 550 aa12.77□□□□□ -0.36
SPG11-217ENST00000559511 PLSCR1O15162 318 aa12.77□□□□□ -0.36
SPG11-217ENST00000559511 PRDM1O75626 825 aa12.77□□□□□ -0.36
SPG11-217ENST00000559511 PRDX5P30044 214 aa12.77□□□□□ -0.36
SPG11-217ENST00000559511 RCAN1P53805 252 aa12.77□□□□□ -0.36
SPG11-217ENST00000559511 CHAF1AQ13111 956 aaPredicted RBP12.77□□□□□ -0.36
SPG11-217ENST00000559511 CCDC186Q7Z3E2 898 aa12.77□□□□□ -0.36
SPG11-217ENST00000559511 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.77□□□□□ -0.36
SPG11-217ENST00000559511 NOSTRINQ8IVI9 506 aa12.77□□□□□ -0.36
SPG11-217ENST00000559511 KIAA1524Q8TCG1 905 aa12.77□□□□□ -0.36
SPG11-217ENST00000559511 SPTLC3Q9NUV7 552 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms