RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 DOCK2Q92608 1830 aa18.29■□□□□ 0.52
LRRC28-213ENST00000559399 CEP85Q6P2H3 762 aa18.29■□□□□ 0.52
LRRC28-213ENST00000559399 DHX36Q9H2U1 1008 aaKnown RBP18.29■□□□□ 0.52
LRRC28-213ENST00000559399 TLR7Q9NYK1 1049 aaKnown RBP18.29■□□□□ 0.52
LRRC28-213ENST00000559399 AGTPBP1Q9UPW5 1226 aa18.29■□□□□ 0.52
LRRC28-213ENST00000559399 PDE4DIPQ5VU43 2346 aa18.29■□□□□ 0.52
LRRC28-213ENST00000559399 BRCA2P51587 3418 aa18.28■□□□□ 0.52
LRRC28-213ENST00000559399 CAP2P40123 477 aa18.28■□□□□ 0.52
LRRC28-213ENST00000559399 ZAP70P43403 619 aa18.28■□□□□ 0.52
LRRC28-213ENST00000559399 PPP4CP60510 307 aa18.28■□□□□ 0.52
LRRC28-213ENST00000559399 ADGRA1Q86SQ6 560 aa18.28■□□□□ 0.52
LRRC28-213ENST00000559399 TBC1D2Q9BYX2 928 aa18.28■□□□□ 0.52
LRRC28-213ENST00000559399 PI4KBQ9UBF8 816 aa18.28■□□□□ 0.52
LRRC28-213ENST00000559399 MKI67P46013 3256 aaKnown RBP18.27■□□□□ 0.52
LRRC28-213ENST00000559399 MYH2Q9UKX2 1941 aa18.27■□□□□ 0.52
LRRC28-213ENST00000559399 FLT1P17948 1338 aa18.27■□□□□ 0.52
LRRC28-213ENST00000559399 GRK4P32298 578 aa18.27■□□□□ 0.52
LRRC28-213ENST00000559399 PRKCZQ05513 592 aa18.27■□□□□ 0.52
LRRC28-213ENST00000559399 SPP2Q13103 211 aa18.27■□□□□ 0.52
LRRC28-213ENST00000559399 ZNF280CQ8ND82 737 aa18.27■□□□□ 0.52
LRRC28-213ENST00000559399 EAF2Q96CJ1 260 aaPredicted RBP18.27■□□□□ 0.52
LRRC28-213ENST00000559399 CCDC8Q9H0W5 538 aaPredicted RBP18.27■□□□□ 0.52
LRRC28-213ENST00000559399 PIH1D3Q9NQM4 214 aaKnown RBP18.27■□□□□ 0.52
LRRC28-213ENST00000559399 PNMA3Q9UL41 463 aa18.27■□□□□ 0.52
LRRC28-213ENST00000559399 TREML2Q5T2D2 321 aa18.26■□□□□ 0.51
LRRC28-213ENST00000559399 MAPKAPK5Q8IW41 473 aa18.26■□□□□ 0.51
LRRC28-213ENST00000559399 PROCA1Q8NCQ7 364 aaPredicted RBP18.26■□□□□ 0.51
LRRC28-213ENST00000559399 PANK1Q8TE04 598 aa18.26■□□□□ 0.51
LRRC28-213ENST00000559399 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
LRRC28-213ENST00000559399 GCC1Q96CN9 775 aa18.26■□□□□ 0.51
LRRC28-213ENST00000559399 USP17L5A8MUK1 530 aa18.25■□□□□ 0.51
LRRC28-213ENST00000559399 RRP1BQ14684 758 aaKnown RBP18.25■□□□□ 0.51
LRRC28-213ENST00000559399 MTFR1Q15390 333 aa18.25■□□□□ 0.51
LRRC28-213ENST00000559399 ERC1Q8IUD2 1116 aa18.25■□□□□ 0.51
LRRC28-213ENST00000559399 AS3MTQ9HBK9 375 aa18.25■□□□□ 0.51
LRRC28-213ENST00000559399 EXOC6BQ9Y2D4 811 aa18.25■□□□□ 0.51
LRRC28-213ENST00000559399 RBBP6Q7Z6E9 1792 aaKnown RBP18.25■□□□□ 0.51
LRRC28-213ENST00000559399 TNPO2O14787 897 aaKnown RBP18.24■□□□□ 0.51
LRRC28-213ENST00000559399 IDH1O75874 414 aaKnown RBP18.24■□□□□ 0.51
LRRC28-213ENST00000559399 CYP7A1P22680 504 aa18.24■□□□□ 0.51
LRRC28-213ENST00000559399 HMGCS2P54868 508 aa18.24■□□□□ 0.51
LRRC28-213ENST00000559399 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
LRRC28-213ENST00000559399 CRACR2BQ8N4Y2 399 aaPredicted RBP18.24■□□□□ 0.51
LRRC28-213ENST00000559399 SLAIN1Q8ND83 568 aa18.24■□□□□ 0.51
LRRC28-213ENST00000559399 TRIM34Q9BYJ4 488 aa18.24■□□□□ 0.51
LRRC28-213ENST00000559399 BIN2Q9UBW5 565 aaPredicted RBP18.24■□□□□ 0.51
LRRC28-213ENST00000559399 ZSWIM8A7E2V4 1837 aa18.23■□□□□ 0.51
LRRC28-213ENST00000559399 DOCK1Q14185 1865 aa18.23■□□□□ 0.51
LRRC28-213ENST00000559399 MS4A1P11836 297 aa18.23■□□□□ 0.51
LRRC28-213ENST00000559399 UBXN2AP68543 259 aa18.23■□□□□ 0.51
LRRC28-213ENST00000559399 FAM110CQ1W6H9 321 aa18.23■□□□□ 0.51
LRRC28-213ENST00000559399 HSP90AB4PQ58FF6 505 aa18.23■□□□□ 0.51
LRRC28-213ENST00000559399 AACSQ86V21 672 aa18.23■□□□□ 0.51
LRRC28-213ENST00000559399 CERS3Q8IU89 383 aa18.23■□□□□ 0.51
LRRC28-213ENST00000559399 FOXP4Q8IVH2 680 aaPredicted RBP18.23■□□□□ 0.51
LRRC28-213ENST00000559399 ANKRD13CQ8N6S4 541 aa18.23■□□□□ 0.51
LRRC28-213ENST00000559399 MAST2Q6P0Q8 1798 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 HLA-DOAP06340 250 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 ASNSP08243 561 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 FLT3LGP49771 235 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 DYNLL1P63167 89 aaKnown RBP18.22■□□□□ 0.51
LRRC28-213ENST00000559399 SH3D19Q5HYK7 790 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 METTL16Q86W50 562 aaKnown RBP18.22■□□□□ 0.51
LRRC28-213ENST00000559399 NKX2-3Q8TAU0 364 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 SHISA4Q96DD7 197 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 WDR18Q9BV38 432 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 DNAJC18Q9H819 358 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 GABRQQ9UN88 632 aa18.22■□□□□ 0.51
LRRC28-213ENST00000559399 AK9Q5TCS8 1911 aa18.21■□□□□ 0.51
LRRC28-213ENST00000559399 CCL5P13501 91 aa18.21■□□□□ 0.51
LRRC28-213ENST00000559399 GCLCP48506 637 aaPredicted RBP18.21■□□□□ 0.51
LRRC28-213ENST00000559399 MAP3K12Q12852 859 aa18.21■□□□□ 0.51
LRRC28-213ENST00000559399 MTMR2Q13614 643 aa18.21■□□□□ 0.51
LRRC28-213ENST00000559399 TMED8Q6PL24 325 aaPredicted RBP18.21■□□□□ 0.51
LRRC28-213ENST00000559399 MAGEB6Q8N7X4 407 aa18.21■□□□□ 0.51
LRRC28-213ENST00000559399 MIGA1Q8NAN2 632 aa18.21■□□□□ 0.51
LRRC28-213ENST00000559399 RNF208Q9H0X6 261 aa18.21■□□□□ 0.51
LRRC28-213ENST00000559399 GINM1Q9NU53 330 aa18.21■□□□□ 0.51
LRRC28-213ENST00000559399 SAP30BPQ9UHR5 308 aaKnown RBP18.21■□□□□ 0.51
LRRC28-213ENST00000559399 GJB1P08034 283 aa18.2■□□□□ 0.5
LRRC28-213ENST00000559399 GJA8P48165 433 aa18.2■□□□□ 0.5
LRRC28-213ENST00000559399 BACE1P56817 501 aa18.2■□□□□ 0.5
LRRC28-213ENST00000559399 IRF5Q13568 498 aa18.2■□□□□ 0.5
LRRC28-213ENST00000559399 COA7Q96BR5 231 aa18.2■□□□□ 0.5
LRRC28-213ENST00000559399 ASCC2Q9H1I8 757 aaPredicted RBP18.2■□□□□ 0.5
LRRC28-213ENST00000559399 TMOD4Q9NZQ9 345 aa18.2■□□□□ 0.5
LRRC28-213ENST00000559399 NDUFB9Q9Y6M9 179 aa18.2■□□□□ 0.5
LRRC28-213ENST00000559399 ADCY3O60266 1144 aa18.19■□□□□ 0.5
LRRC28-213ENST00000559399 GDF11O95390 407 aa18.19■□□□□ 0.5
LRRC28-213ENST00000559399 USP5P45974 858 aa18.19■□□□□ 0.5
LRRC28-213ENST00000559399 PXYLP1Q8TE99 480 aa18.19■□□□□ 0.5
LRRC28-213ENST00000559399 ANTXR1Q9H6X2 564 aa18.19■□□□□ 0.5
LRRC28-213ENST00000559399 IL1RAPL2Q9NP60 686 aa18.19■□□□□ 0.5
LRRC28-213ENST00000559399 ZBTB21Q9ULJ3 1066 aa18.19■□□□□ 0.5
LRRC28-213ENST00000559399 HMMRO75330 724 aa18.18■□□□□ 0.5
LRRC28-213ENST00000559399 INHAP05111 366 aa18.18■□□□□ 0.5
LRRC28-213ENST00000559399 ELNP15502 786 aa18.18■□□□□ 0.5
LRRC28-213ENST00000559399 IRX3P78415 501 aaPredicted RBP18.18■□□□□ 0.5
LRRC28-213ENST00000559399 JAG1P78504 1218 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms