RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 ADAMTS7Q9UKP4 1686 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 SYNDIG1LA6NDD5 238 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 IL33O95760 270 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 GTF2A1P52655 376 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 RBM5P52756 815 aaKnown RBP eCLIP6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 ITKQ08881 620 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 ATP6V1E2Q96A05 226 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 ASPSCR1Q9BZE9 553 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 NIF3L1Q9GZT8 377 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 COL18A1P39060 1754 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 CTAGE5O15320 804 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 ZBTB24O43167 697 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 NDUFB5O43674 189 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 PRPF38BQ5VTL8 546 aaKnown RBP6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 AGAP9Q5VTM2 703 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 MMS22LQ6ZRQ5 1243 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 MCM10Q7L590 875 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 TPH2Q8IWU9 490 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 TAF4BQ92750 862 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 USP25Q9UHP3 1055 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 TSR3Q9UJK0 312 aaKnown RBP6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 APAF1O14727 1248 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 TIPRLO75663 272 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 CCDC175P0C221 793 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 STT3AP46977 705 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 FKBP5Q13451 457 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 PADI6Q6TGC4 694 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 SIX5Q8N196 739 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 PRKD2Q9BZL6 878 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 ZBTB3Q9H5J0 574 aa6.75□□□□□ -1.33
CTDSPL2-206ENST00000559175 HOXC13P31276 330 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 CENPTQ96BT3 561 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 HOOK2Q96ED9 719 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 YIPF4Q9BSR8 244 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 RBCK1Q9BYM8 510 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 EFCC1Q9HA90 598 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 TBK1Q9UHD2 729 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 R3HCC1Q9Y3T6 440 aaKnown RBP6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 SNX5Q9Y5X3 404 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 SYNRGQ9UMZ2 1314 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 CCP110O43303 1012 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 COQ9O75208 318 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 NEK2P51955 445 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 FAM180BQ6P0A1 224 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 PDXDC2PQ6P474 469 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 FBF1Q8TES7 1133 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 ZFPM2Q8WW38 1151 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 NCAPGQ9BPX3 1015 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 SIRPGQ9P1W8 387 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 ZNF180Q9UJW8 692 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 GLI3P10071 1580 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 PER1O15534 1290 aaPredicted RBP6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 HSP90AB1P08238 724 aaKnown RBP6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 NCAM1P13591 858 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 MAPK9P45984 424 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 TSGA10IPQ3SY00 556 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 RASGRP2Q7LDG7 609 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 C1orf216Q8TAB5 229 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 UHMK1Q8TAS1 419 aaKnown RBP6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 ZNF652Q9Y2D9 606 aa6.74□□□□□ -1.33
CTDSPL2-206ENST00000559175 ATP5J2-PTCD1G3V325 749 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 H0YHG0 523 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 HTATSF1O43719 755 aaKnown RBP6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 PEX19P40855 299 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 SARNPP82979 210 aaKnown RBP6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 HYIQ5T013 277 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 C6orf118Q5T5N4 469 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 XRRA1Q6P2D8 792 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 C2orf49Q9BVC5 232 aaPredicted RBP6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 ACAD8Q9UKU7 415 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 LMNB2Q03252 620 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 MTMR1Q13613 665 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 DDB1Q16531 1140 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 CCDC81Q6ZN84 652 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 EEPD1Q7L9B9 569 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 TRMT2BQ96GJ1 504 aaKnown RBP6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 PPP1R9AQ9ULJ8 1098 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 RREB1Q92766 1687 aa6.73□□□□□ -1.33
CTDSPL2-206ENST00000559175 KLF4O43474 513 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 SETSIPP0DME0 302 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 CLCN6P51797 869 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 DDX10Q13206 875 aaKnown RBP6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 SLMAPQ14BN4 828 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 FAM47EQ6ZV65 393 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 PCDHGC3Q9UN70 934 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 CFAP99D6REC4 459 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 DSC3Q14574 896 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 MAFFQ9ULX9 164 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 THSD7AQ9UPZ6 1657 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 KRT20P35900 424 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 FOXK1P85037 733 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 MNS1Q8NEH6 495 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 CHAC2Q8WUX2 184 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 CSRNP2Q9H175 543 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 PLCB1Q9NQ66 1216 aa6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 CHCHD3Q9NX63 227 aaKnown RBP6.72□□□□□ -1.33
CTDSPL2-206ENST00000559175 TMEM260Q9NX78 707 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms