RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 GSTO1P78417 241 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 SEC23AQ15436 765 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 ZRSR1Q15695 479 aaKnown RBP13.06□□□□□ -0.32
CLPX-204ENST00000559152 SBK1Q52WX2 424 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 C15orf52Q6ZUT6 534 aaKnown RBP13.06□□□□□ -0.32
CLPX-204ENST00000559152 CATIPQ7Z7H3 387 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 CRACR2BQ8N4Y2 399 aaPredicted RBP13.06□□□□□ -0.32
CLPX-204ENST00000559152 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
CLPX-204ENST00000559152 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLPX-204ENST00000559152 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.06□□□□□ -0.32
CLPX-204ENST00000559152 CASZ1Q86V15 1759 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 GOLGA6L19H0YKK7 550 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 ORC4O43929 436 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 ST5P78524 1137 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 AKAP17AQ02040 695 aaKnown RBP13.05□□□□□ -0.32
CLPX-204ENST00000559152 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 ZNF804AQ7Z570 1209 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 DZIP1Q86YF9 867 aaKnown RBP13.05□□□□□ -0.32
CLPX-204ENST00000559152 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 RPGRQ92834 1020 aaKnown RBP13.05□□□□□ -0.32
CLPX-204ENST00000559152 AIFM3Q96NN9 605 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 RNF26Q9BY78 433 aaPredicted RBP13.05□□□□□ -0.32
CLPX-204ENST00000559152 FOXP1Q9H334 677 aaPredicted RBP13.05□□□□□ -0.32
CLPX-204ENST00000559152 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.05□□□□□ -0.32
CLPX-204ENST00000559152 GJB4Q9NTQ9 266 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 MMP1P03956 469 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 KLRK1P26718 216 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 CHAF1AQ13111 956 aaPredicted RBP13.05□□□□□ -0.32
CLPX-204ENST00000559152 IFIT1BQ5T764 474 aaKnown RBP13.05□□□□□ -0.32
CLPX-204ENST00000559152 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.05□□□□□ -0.32
CLPX-204ENST00000559152 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 AMIGO3Q86WK7 504 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 ZNF384Q8TF68 577 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 TIGD1Q96MW7 591 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 IRS2Q9Y4H2 1338 aa13.05□□□□□ -0.32
CLPX-204ENST00000559152 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
CLPX-204ENST00000559152 USP17L12C9JPN9 530 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 USP17L21D6R901 530 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 OFD1O75665 1012 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 PDE4BQ07343 736 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 NBPF11Q86T75 865 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 NOSTRINQ8IVI9 506 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 CCDC24Q8N4L8 307 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 DNAJC25Q9H1X3 360 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 AATFQ9NY61 560 aaKnown RBP eCLIP13.04□□□□□ -0.32
CLPX-204ENST00000559152 A0A1B0GVL5 298 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 DDAH1O94760 285 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 LDHBP07195 334 aaKnown RBP13.04□□□□□ -0.32
CLPX-204ENST00000559152 NDUFA8P51970 172 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 RILPL1Q5EBL4 403 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 STK11IPQ8N1F8 1099 aa13.04□□□□□ -0.32
CLPX-204ENST00000559152 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
CLPX-204ENST00000559152 DCP1AQ9NPI6 582 aaPredicted RBP13.04□□□□□ -0.32
CLPX-204ENST00000559152 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
CLPX-204ENST00000559152 BAG3O95817 575 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 LDHCP07864 332 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
CLPX-204ENST00000559152 PRR5LQ6MZQ0 368 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 AMOTL1Q8IY63 956 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 CEP57L1Q8IYX8 460 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 ENAHQ8N8S7 591 aaPredicted RBP13.03□□□□□ -0.32
CLPX-204ENST00000559152 NOL10Q9BSC4 688 aaKnown RBP13.03□□□□□ -0.32
CLPX-204ENST00000559152 CEP131Q9UPN4 1083 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 SBF2Q86WG5 1849 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 TAF1P21675 1872 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 DUOX1Q9NRD9 1551 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 BECN2A8MW95 431 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 CUTAO60888 179 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 PRDX5P30044 214 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 RBM6P78332 1123 aaKnown RBP13.03□□□□□ -0.32
CLPX-204ENST00000559152 CRY2Q49AN0 593 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
CLPX-204ENST00000559152 MAP3K14Q99558 947 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
CLPX-204ENST00000559152 RGS17Q9UGC6 210 aaPredicted RBP13.03□□□□□ -0.32
CLPX-204ENST00000559152 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLPX-204ENST00000559152 MAST2Q6P0Q8 1798 aa13.02□□□□□ -0.32
CLPX-204ENST00000559152 FAM237AA0A1B0GTK4 181 aa13.02□□□□□ -0.33
CLPX-204ENST00000559152 BBOX1O75936 387 aa13.02□□□□□ -0.33
CLPX-204ENST00000559152 ZNF202O95125 648 aa13.02□□□□□ -0.33
CLPX-204ENST00000559152 PTPAQ15257 358 aa13.02□□□□□ -0.33
CLPX-204ENST00000559152 CCDC178Q5BJE1 867 aa13.02□□□□□ -0.33
CLPX-204ENST00000559152 DIS3L2Q8IYB7 885 aaKnown RBP13.02□□□□□ -0.33
CLPX-204ENST00000559152 NAP1L5Q96NT1 182 aaPredicted RBP13.02□□□□□ -0.33
CLPX-204ENST00000559152 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.33
CLPX-204ENST00000559152 PRPF3O43395 683 aaKnown RBP13.01□□□□□ -0.33
CLPX-204ENST00000559152 GYS1P13807 737 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 PFKFB1P16118 471 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 TERF1P54274 439 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 SARM1Q6SZW1 724 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 TXNRD3Q86VQ6 643 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 TRIM5Q9C035 493 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 AP5Z1O43299 807 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 SERPINB2P05120 415 aa13.01□□□□□ -0.33
CLPX-204ENST00000559152 CDC25BP30305 580 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms