RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 MAP3K12Q12852 859 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 ERICH6BQ5W0A0 696 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 SLF2Q8IX21 1173 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 MAGEB6Q8N7X4 407 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 OSBPL3Q9H4L5 887 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 VEZTQ9HBM0 779 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 USP40Q9NVE5 1235 aa18.8■□□□□ 0.6
LINC01220-201ENST00000558575 MYO5AQ9Y4I1 1855 aaKnown RBP18.8■□□□□ 0.6
LINC01220-201ENST00000558575 CCL15-CCL14A0A0B4J2E2 113 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 TCRBV5S4A2TA0A5A2 114 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 MYO1BO43795 1136 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 PDE6AP16499 860 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 CYP7A1P22680 504 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 PPP4CP60510 307 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 LACTBP83111 547 aaPredicted RBP18.79■□□□□ 0.6
LINC01220-201ENST00000558575 NFIAQ12857 509 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 CCL15Q16663 113 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 SLC9C2Q5TAH2 1124 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 CENPQQ7L2Z9 268 aaPredicted RBP18.79■□□□□ 0.6
LINC01220-201ENST00000558575 CCDC136Q96JN2 1154 aa18.79■□□□□ 0.6
LINC01220-201ENST00000558575 TCP10L2B9ZVM9 353 aa18.78■□□□□ 0.6
LINC01220-201ENST00000558575 RASA3Q14644 834 aa18.78■□□□□ 0.6
LINC01220-201ENST00000558575 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.78■□□□□ 0.6
LINC01220-201ENST00000558575 CDAN1Q8IWY9 1227 aa18.78■□□□□ 0.6
LINC01220-201ENST00000558575 KBTBD3Q8NAB2 608 aa18.78■□□□□ 0.6
LINC01220-201ENST00000558575 FAM198AQ9UFP1 575 aa18.78■□□□□ 0.6
LINC01220-201ENST00000558575 A0A1W2PPC1 479 aa18.77■□□□□ 0.6
LINC01220-201ENST00000558575 WDHD1O75717 1129 aaPredicted RBP18.77■□□□□ 0.6
LINC01220-201ENST00000558575 ECM2O94769 699 aaPredicted RBP18.77■□□□□ 0.6
LINC01220-201ENST00000558575 CTGFP29279 349 aa18.77■□□□□ 0.6
LINC01220-201ENST00000558575 ADD2P35612 726 aa18.77■□□□□ 0.6
LINC01220-201ENST00000558575 DYNLL1P63167 89 aaKnown RBP18.77■□□□□ 0.6
LINC01220-201ENST00000558575 FKBP1CQ5VVH2 108 aa18.77■□□□□ 0.6
LINC01220-201ENST00000558575 SKAP1Q86WV1 359 aa18.77■□□□□ 0.6
LINC01220-201ENST00000558575 ZFPM1Q8IX07 1006 aa18.77■□□□□ 0.6
LINC01220-201ENST00000558575 TEPSINQ96N21 525 aa18.77■□□□□ 0.6
LINC01220-201ENST00000558575 HTATIP2Q9BUP3 242 aa18.77■□□□□ 0.6
LINC01220-201ENST00000558575 ZNF532Q9HCE3 1301 aa18.76■□□□□ 0.59
LINC01220-201ENST00000558575 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
LINC01220-201ENST00000558575 GJA8P48165 433 aa18.76■□□□□ 0.59
LINC01220-201ENST00000558575 MIGA1Q8NAN2 632 aa18.76■□□□□ 0.59
LINC01220-201ENST00000558575 SH3RF3Q8TEJ3 882 aaPredicted RBP18.76■□□□□ 0.59
LINC01220-201ENST00000558575 DDX4Q9NQI0 724 aaKnown RBP18.76■□□□□ 0.59
LINC01220-201ENST00000558575 PPP4R2Q9NY27 417 aa18.76■□□□□ 0.59
LINC01220-201ENST00000558575 AATFQ9NY61 560 aaKnown RBP eCLIP18.76■□□□□ 0.59
LINC01220-201ENST00000558575 TLR2O60603 784 aa18.75■□□□□ 0.59
LINC01220-201ENST00000558575 GTF2A2P52657 109 aa18.75■□□□□ 0.59
LINC01220-201ENST00000558575 RIOK1Q9BRS2 568 aaKnown RBP18.75■□□□□ 0.59
LINC01220-201ENST00000558575 IDI2Q9BXS1 227 aa18.75■□□□□ 0.59
LINC01220-201ENST00000558575 TMEM39BQ9GZU3 492 aa18.75■□□□□ 0.59
LINC01220-201ENST00000558575 NR2E3Q9Y5X4 410 aa18.75■□□□□ 0.59
LINC01220-201ENST00000558575 RFX7Q2KHR2 1363 aa18.74■□□□□ 0.59
LINC01220-201ENST00000558575 VGLL4Q14135 290 aa18.74■□□□□ 0.59
LINC01220-201ENST00000558575 UBE3CQ15386 1083 aa18.74■□□□□ 0.59
LINC01220-201ENST00000558575 TMED8Q6PL24 325 aaPredicted RBP18.74■□□□□ 0.59
LINC01220-201ENST00000558575 FAM83AQ86UY5 434 aa18.74■□□□□ 0.59
LINC01220-201ENST00000558575 COL25A1Q9BXS0 654 aaPredicted RBP18.74■□□□□ 0.59
LINC01220-201ENST00000558575 DOCK2Q92608 1830 aa18.74■□□□□ 0.59
LINC01220-201ENST00000558575 BAG3O95817 575 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 GJB1P08034 283 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 CCL5P13501 91 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 RGS3P49796 1198 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 PRMT2P55345 433 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 TCP10Q12799 353 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 KIF22Q14807 665 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 SH3BP5LQ7L8J4 393 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 NKX2-3Q8TAU0 364 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 FAM151AQ8WW52 585 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 TMOD2Q9NZR1 351 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 DOCK3Q8IZD9 2030 aa18.73■□□□□ 0.59
LINC01220-201ENST00000558575 RNF113AO15541 343 aaKnown RBP18.72■□□□□ 0.59
LINC01220-201ENST00000558575 GNRH1P01148 92 aa18.72■□□□□ 0.59
LINC01220-201ENST00000558575 TNFAIP1Q13829 316 aa18.72■□□□□ 0.59
LINC01220-201ENST00000558575 EVI5LQ96CN4 794 aa18.72■□□□□ 0.59
LINC01220-201ENST00000558575 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.72■□□□□ 0.59
LINC01220-201ENST00000558575 PUS7LQ9H0K6 701 aaKnown RBP18.72■□□□□ 0.59
LINC01220-201ENST00000558575 ENTPD3O75355 529 aa18.71■□□□□ 0.59
LINC01220-201ENST00000558575 NPM3O75607 178 aaKnown RBP18.71■□□□□ 0.59
LINC01220-201ENST00000558575 FARP2O94887 1054 aaPredicted RBP18.71■□□□□ 0.59
LINC01220-201ENST00000558575 TNNI2P48788 182 aa18.71■□□□□ 0.59
LINC01220-201ENST00000558575 Q7L0L9 218 aa18.71■□□□□ 0.59
LINC01220-201ENST00000558575 TEX11Q8IYF3 940 aa18.71■□□□□ 0.59
LINC01220-201ENST00000558575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.71■□□□□ 0.59
LINC01220-201ENST00000558575 OSBP2Q969R2 916 aa18.71■□□□□ 0.59
LINC01220-201ENST00000558575 TRIM47Q96LD4 638 aa18.71■□□□□ 0.59
LINC01220-201ENST00000558575 SRRDQ9UH36 339 aa18.71■□□□□ 0.59
LINC01220-201ENST00000558575 MAGEB6P1A0A0J9YX57 407 aa18.7■□□□□ 0.58
LINC01220-201ENST00000558575 BTBD19C9JJ37 291 aa18.7■□□□□ 0.58
LINC01220-201ENST00000558575 GSPT1P15170 499 aaKnown RBP18.7■□□□□ 0.58
LINC01220-201ENST00000558575 GRK4P32298 578 aa18.7■□□□□ 0.58
LINC01220-201ENST00000558575 ZSCAN25Q6NSZ9 544 aa18.7■□□□□ 0.58
LINC01220-201ENST00000558575 LCORLQ8N3X6 602 aa18.7■□□□□ 0.58
LINC01220-201ENST00000558575 DEFB123Q8N688 67 aa18.7■□□□□ 0.58
LINC01220-201ENST00000558575 TGFBRAP1Q8WUH2 860 aa18.7■□□□□ 0.58
LINC01220-201ENST00000558575 NOL10Q9BSC4 688 aaKnown RBP18.7■□□□□ 0.58
LINC01220-201ENST00000558575 FSD1Q9BTV5 496 aa18.7■□□□□ 0.58
LINC01220-201ENST00000558575 DDTLA6NHG4 134 aaPredicted RBP18.69■□□□□ 0.58
LINC01220-201ENST00000558575 SPDYE5A6NIY4 337 aa18.69■□□□□ 0.58
LINC01220-201ENST00000558575 PLCG2P16885 1265 aa18.69■□□□□ 0.58
LINC01220-201ENST00000558575 OSBPP22059 807 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms